DuhaimeLab / VirusHostInteractionPredictor

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main: 94%

LAST BUILD ON BRANCH gh-readonly-queue/main/pr-112-bcd29e9933c82d2ad15881c0a5631d3fdce76aac

branch: gh-readonly-queue/main/pr-112-bcd29e9933c82d2ad15881c0a5631d3fdce76aac

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• gh-readonly-queue/main/pr-112-bcd29e9933c82d2ad15881c0a5631d3fdce76aac
• TAAI_TCAI
• build/python-3.13
• compute_pair_CUB_features
• dependabot/pip/biopython-1.85
• dependabot/pip/python-dev-0732576d46
• dependabot/pip/python-dev-18acf35fe3
• dependabot/pip/python-dev-19516c84a5
• dependabot/pip/python-dev-39f9cae977
• dependabot/pip/python-dev-4c82cb9392
• dependabot/pip/python-dev-7e7b4baca3
• dependabot/pip/python-dev-81985d9ff0
• dependabot/pip/python-dev-86ba1c6dd5
• dependabot/pip/python-dev-b895837ea7
• dependabot/pip/python-dev-be0bcff883
• dependabot/pip/python-dev-d789a6fb1a
• dependabot/pip/python-dev-e1ba9a27c6
• dependabot/pip/python-dev-e9236f4f02
• dependabot/pip/python-dev-fa19925471
• dependabot/pip/python-prod-51c51656ea
• dependabot/pip/scikit-learn-1.6.0
• gh-readonly-queue/main/pr-100-09eda588f2b76305a6256ebeb90dd83ce653630b
• gh-readonly-queue/main/pr-102-8ad1600110291f6dd92b8e1fbab53986a788fd12
• gh-readonly-queue/main/pr-104-d402b895415b203af7805f57b80b846a89e3362c
• gh-readonly-queue/main/pr-105-485e5a042e0d9081d7186bf009c387386adc792f
• gh-readonly-queue/main/pr-106-4a1be3532ae992dce2cadaaf9b3250a3a73d03ba
• gh-readonly-queue/main/pr-107-5dc26be8f9cb1e230e3df09069fe9e679b078990
• gh-readonly-queue/main/pr-108-bcdf5db8bdae72a5d70eaaa8941ec9bd0b64f5a4
• gh-readonly-queue/main/pr-109-c8a0123d7b1f6c98905a3331982efe6f5dcf8865
• gh-readonly-queue/main/pr-111-b9d506fbd8f9fa46a7670c66844629f06a8814e1
• gh-readonly-queue/main/pr-113-5d495cc5f621077ba970b20201f82875e3624505
• gh-readonly-queue/main/pr-114-5f40680a459d062b937ebf8f6ccbc42982ba1951
• gh-readonly-queue/main/pr-115-d4d40c51ecf69d3d070f5aea388cc0427e27d55d
• gh-readonly-queue/main/pr-116-0a403bd3c7f43c30322ecdaea5e64a1f3dafbfd3
• gh-readonly-queue/main/pr-117-eeafedde97f073dea6a3b23b71974d02b237c57f
• gh-readonly-queue/main/pr-118-ab1e56a92d8c1b48bcd0a0bd443e2e2bb5e28c18
• gh-readonly-queue/main/pr-119-be06ead40ad87d7844ab29857fe2a18cbde4fc51
• gh-readonly-queue/main/pr-120-e1957a1bcc7d26f0dc24233a52cfc7bc75b4d09f
• gh-readonly-queue/main/pr-121-7abafef2ba58e5ef9a5c062c67cfab8b74eafa0d
• gh-readonly-queue/main/pr-122-2fb501ca717b4d1b766658b6637d96805ecd7be9
• gh-readonly-queue/main/pr-123-3b950392609dbe603c096cf295948db3d9a4be30
• gh-readonly-queue/main/pr-124-a0220a554437ddc47f7030719fa280f5a35486eb
• gh-readonly-queue/main/pr-126-ebe03c5b4d6a7831f4159d46a15b6bb962da0c14
• gh-readonly-queue/main/pr-127-78a990b30993070e9893f12067490f344d32d454
• gh-readonly-queue/main/pr-132-57e8efadede3ce61b5665080607a5e463b10971c
• gh-readonly-queue/main/pr-133-70c85e81caad9552749dc6b80c03b948e54b15b8
• gh-readonly-queue/main/pr-135-33f451c4074d271371ffb6e8ed9b604c9111ef20
• gh-readonly-queue/main/pr-136-fea3d7bdd18e900e980eaa9f8c5925ad5a999f5a
• gh-readonly-queue/main/pr-137-67ab71ac0fad13db41b3a8405cd7c70bb80ce0d6
• gh-readonly-queue/main/pr-138-1fb8fd29e95d00f4f7a0460f586db4bf725bdd8b
• gh-readonly-queue/main/pr-141-3f5fc4a914d07d2d243cc66d3474a663e4353e5a
• gh-readonly-queue/main/pr-144-66eb31cbad49395a518e4144dd89e5520a3354e0
• gh-readonly-queue/main/pr-145-d0135ddb0a1f8052b36a15821477565aa62f5132
• gh-readonly-queue/main/pr-147-d2f8841736813404739b8d6eba4dc05e087e96ac
• gh-readonly-queue/main/pr-151-1794e747ac70f0d59b04c385e67cf51d1f9f6147
• gh-readonly-queue/main/pr-152-e24a3bb1b0fee40af42a30a384a8600d76e21fd6
• gh-readonly-queue/main/pr-162-60c088d395e3104f615c405a813ecc3e0fd3b4f1
• gh-readonly-queue/main/pr-163-383e977d1197f9ab7d3b1a17f3f6212993c2fee6
• gh-readonly-queue/main/pr-164-9875e6a81e42e7bec9aaac7e4fb54acb69219feb
• gh-readonly-queue/main/pr-167-d206fe866ebb41fc8bfdd068a6a5915f89cfe592
• gh-readonly-queue/main/pr-168-4f75bb67308eef1801b1732649adfaf3ba929158
• gh-readonly-queue/main/pr-169-8fe249532b41993690d42ef0f992933194f07625
• gh-readonly-queue/main/pr-170-0dc60e1bea00fa5dc541489e15db00f890f819d3
• gh-readonly-queue/main/pr-171-3d6113ee7eb7309b57f88819bcfe446c1b6f1fdf
• gh-readonly-queue/main/pr-175-5d95a843fc1225c909fd097295a7335639dfeb11
• gh-readonly-queue/main/pr-176-2d9cdcc4b0a640b6d25ce75f5c84ce8ee4c5f3ef
• gh-readonly-queue/main/pr-186-e214bb1ce3c2793c56e10a3e0c61259635d91496
• gh-readonly-queue/main/pr-67-a10efe063f508399001f78adaa5400afd887c5fa
• gh-readonly-queue/main/pr-76-3dcff9e80540508d469e69b8fa85e8e78415017e
• gh-readonly-queue/main/pr-82-7aecf9afdde2eecfdf6854b1e042076ba32ea4c8
• gh-readonly-queue/main/pr-83-bf4a512b2d88d57b6dbaf4af69606ccddbd97922
• gh-readonly-queue/main/pr-84-7aecf9afdde2eecfdf6854b1e042076ba32ea4c8
• gh-readonly-queue/main/pr-85-4a7a2448f8a9b4dca23660ad25e329826897026e
• gh-readonly-queue/main/pr-88-353b84c9ab93f40860c7e232bab93f476b88b1b4
• gh-readonly-queue/main/pr-90-40f8bc548caf095d0c3db625124ed332dd0ee0b3
• gh-readonly-queue/main/pr-92-858508a0550e79478da4e2152943f7b1c6a027b3
• gh-readonly-queue/main/pr-93-21ad5e5ae9f22c662e639838ea24da5a4afd049a
• gh-readonly-queue/main/pr-94-f6c64c26f094d2e22f571ea1d360ef8507775b01
• gh-readonly-queue/main/pr-96-57845b3a18fd19e60585294d12398b5d7d870222
• gh-readonly-queue/main/pr-98-e8aee2b5b8ef77b4b09499ebc902e81bb47827e8
• main
• tRNA_counts_frq
• update_example

Build # 9176502957

Build Type

push

github

Committed by web-flow

Commit Message

Gene set amino acids (#112)

- defined amino_acid_counts()
- defined amino_acid_frequency()
- wrote pytests for both
- updated the input test_short_genes_file.ffn to better test synonymous
codons

Run Details

433 of 463 relevant lines covered (93.52%)

1.87 hits per line