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Clinical-Genomics / housekeeper
95%

Build:
DEFAULT BRANCH: master
Repo Added 29 Jul 2016 07:28AM UTC
Files 40
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LAST BUILD ON BRANCH master
branch: master
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  • master
  • 129-add-file-already-in-bundle-directory
  • 197-improve-visualisation
  • add-cryptography
  • add-delete-samplesheet-command
  • add-poetry
  • allow-python-3-11
  • archiving-filter-on-tags
  • archiving-fix-retrieved-file-filter
  • fetch_archived_files_without_tags
  • filter-file-not-archiving
  • fix-bump-version-action
  • fix-bump2version
  • fix-no_dirs-200908
  • fix-pypi-build-action
  • fix-python-syntax-warning
  • fix-retrieval-filter
  • fix-session-cascade-loading
  • pin-version-for-marshmallow
  • refactor-get-files
  • refactor-sql-filter-function-attr
  • refactor-sql-handlers
  • separate-remote-files
  • toggle-session-future
  • update-actions
  • update-black
  • update-deploy-instructions
  • update-linters
  • update-python
  • updste-virtulenv
  • use-poetry
  • use-poetry-instead-of-pip

23 Mar 2026 02:17PM UTC coverage: 94.83%. Remained the same
23441953481

push

github

web-flow
pin marshmallow version (#222)(patch)

[15:13] [hiseq.clinical@hasta:~] [S_base]  $ housekeeper-test-deploy pin-version-for-marshmallow
Pulling image for feature branch: pin-version-for-marshmallow...
WARNING: Authentication token file not found : Only pulls of public images will succeed
INFO:    Starting build...
Getting image source signatures
Skipping fetch of repeat blob sha256:ccaf924378196916667fc6d5ff4866e2d
Skipping fetch of repeat blob sha256:63c1c7b8e53db7f44be0c612f22ad9dfd
Skipping fetch of repeat blob sha256:1a204cbad648f279b76428ee90efb1e15
Skipping fetch of repeat blob sha256:273839f2f266f2d07b5bc349014d526be
Copying blob sha256:3147fffd192bec3aea40f69372cbcac0d
 93 B / 93 B [==============================================================] 0s
Copying blob sha256:7f358a5569b08572563242407fdd83682
 458.48 KiB / 458.48 KiB [==================================================] 0s
Copying blob sha256:4a2bcba238aa1debab7c76b76e568b236
 87.45 MiB / 87.45 MiB [====================================================] 1s
Copying config sha256:7c590435e88a347c720087c193752fe6a
 6.31 KiB / 6.31 KiB [======================================================] 0s
Writing manifest to image destination
Storing signatures
INFO:    Creating SIF file...
INFO:    Build complete: /home/proj/stage/singularity_cache/housekeeper_pin-version-for-marshmallow.sif
You can now run 'housekeeper-test --help' to test the feature branch: pin-version-for-marshmallow.

2 of 2 new or added lines in 1 file covered. (100.0%)

1284 of 1354 relevant lines covered (94.83%)

0.95 hits per line

Relevant lines Covered
Build:
Build:
1354 RELEVANT LINES 1284 COVERED LINES
0.95 HITS PER LINE
Source Files on master
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  • Changed 0
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Coverage ∆ File Lines Relevant Covered Missed Hits/Line

Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
23441953481 master pin marshmallow version (#222)(patch) [15:13] [hiseq.clinical@hasta:~] [S_base] $ housekeeper-test-deploy pin-version-for-marshmallow Pulling image for feature branch: pin-version-for-marshmallow... WARNING: Authentication token file not found :... push 23 Mar 2026 02:18PM UTC web-flow github
94.83
17737232889 master Allow python 3.11 (#220) (patch) ### Fixed - Python version >= 3.11 specified push 15 Sep 2025 02:52PM UTC web-flow github
94.83
17736461551 master Add retrieval ongoing distinction to store methods (#219) (patch) push 15 Sep 2025 02:26PM UTC GitHub github
94.83
14733771040 master Fix(CI) Update version of bump2version version used (#217) ## Description bump2version-ci cannot deal with double quotes "like these" in commit messages. This was patched in https://github.com/Clinical-Genomics/bump2version-ci/pull/12. However w... push 29 Apr 2025 02:27PM UTC web-flow github
94.8
12984083674 master Updste virtulenv (#216) #### Changed - Updated virtul env push 27 Jan 2025 07:33AM UTC web-flow github
94.8
12887768452 master 129 add file already in bundle directory (#215)(patch) ### Changed - Change logic in housekeeper add file to check if the file exists in the bundle directory and skip hard linking if the given file is the one already in the bundle directory. - I... push 21 Jan 2025 01:15PM UTC web-flow github
94.8
12232107280 master feat(linters): (#213) ### Changed - Update linbters push 09 Dec 2024 08:54AM UTC web-flow github
94.78
11928922230 master feat(get_files): Refactor (#212) ### Changed - Refactor get_files push 20 Nov 2024 07:47AM UTC web-flow github
94.78
11046705565 master fix(python): Syntax warning (#210) ### Changed - Fix Python Syntax warning push 26 Sep 2024 06:21AM UTC web-flow github
94.78
11027858744 master feat(python): Update (#208) ### Changed - Updated Python to 3.12 push 25 Sep 2024 06:54AM UTC web-flow github
94.78
See All Builds (1216)
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