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Clinical-Genomics / cgbeacon2
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DEFAULT BRANCH: master
Repo Added 09 Apr 2020 07:46AM UTC
Files 37
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  • master
  • 1.2
  • add_dataset
  • add_mkdocs
  • add_variants_api
  • auth_levels
  • bnd_variants
  • bugfixes_1.0.1
  • check_build_against_dsets
  • codeowners
  • create_wsgi
  • delete-dataset
  • delete_variants
  • dockerfile
  • enforce_json
  • expand_snv_query
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  • fix_#57
  • genes_to_panel
  • github_actions
  • info_endpoint
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  • negative_responses
  • no_content_type_check
  • non_specific_queries
  • northwestwitch-patch-1
  • panel_filter
  • parse_svs
  • parse_vcf
  • query_beacon
  • query_endpoint
  • query_with_authlevel
  • require_cython
  • results_by_authlevel
  • run_post_queries
  • save_variants
  • set_cython_version
  • simple_query_interface
  • snvs_variantTypes
  • some_fixes
  • update_alleleCount_varCount
  • update_dataset
  • update_variants
  • v1
  • v1.1
  • variants_remove_api
  • variantype_snv
  • version_1
  • version_1.1
  • version_1.2

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Merge pull request #95 from Clinical-Genomics/require_cython

Add Cython to requirements file

1126 of 1159 relevant lines covered (97.15%)

0.97 hits per line

Relevant lines Covered
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Build:
1159 RELEVANT LINES 1126 COVERED LINES
0.97 HITS PER LINE
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Recent builds

Builds Branch Commit Type Ran Committer Via Coverage
492 master Merge pull request #95 from Clinical-Genomics/require_cython Add Cython to requirements file push 21 Oct 2020 09:42AM UTC web-flow travis-ci-com pending completion  
489 master Merge pull request #94 from Clinical-Genomics/create_wsgi Create WSGI file for deploying the app on the server push 20 Oct 2020 11:04AM UTC web-flow travis-ci-com pending completion  
483 master Merge pull request #93 from Clinical-Genomics/version_1.2 Version 1.2 push 19 Oct 2020 01:16PM UTC web-flow travis-ci-com pending completion  
480 master Merge pull request #91 from Clinical-Genomics/variants_remove_api API endpoint to remove variants push 16 Oct 2020 09:51AM UTC web-flow travis-ci-com pending completion  
474 master Merge pull request #89 from Clinical-Genomics/add_variants_api API to add variants from POST request params push 15 Oct 2020 12:58PM UTC web-flow travis-ci-com pending completion  
453 master Merge pull request #87 from Clinical-Genomics/genes_to_panel Create Bedtool object from list of gene IDs (hgnc and ensembl IDs) push 13 Oct 2020 10:30AM UTC web-flow travis-ci-com pending completion  
442 master small fixes push 13 Oct 2020 09:24AM UTC northwestwitch travis-ci-com pending completion  
441 master added function that creates a Bedtool object from a list of gene ids push 13 Oct 2020 09:21AM UTC northwestwitch travis-ci-com pending completion  
440 master Merge pull request #86 from Clinical-Genomics/genes_to_panel Download genes for a genome build from Ensembl and save them to database push 12 Oct 2020 01:23PM UTC web-flow travis-ci-com pending completion  
426 master Merge pull request #82 from Clinical-Genomics/add_mkdocs Add extensive documentation using MkDocs push 24 Jun 2020 02:04PM UTC web-flow travis-ci-com pending completion  
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