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pirl-unc / tcrsift / 26820948136

02 Jun 2026 12:52PM UTC coverage: 81.384% (+0.1%) from 81.288%
26820948136

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2.17.0: gene-signature selection methods + exclude_viral default on (#138)

exclude_viral defaults ON (audit CSV + funnel still surface drops). New tcrsift.signature_methods turns gene signatures into synthetic selection methods (score -> call-positive -> emit clone-sample-long rows); two axes TumorReactive + AntigenExperienced composed from canonical tcrsift.signatures sets. Rules use a signature like a sort. +tests.

7830 of 9621 relevant lines covered (81.38%)

3.25 hits per line

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57.84
/cli.py


Source Not Available

The file "cli.py" isn't available on github. Either it's been removed, or the repo root directory needs to be updated.

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