24801682404

Committed 22 Apr 2026 08:43PM UTC coverage: 58.82% (+0.4%) from 58.466%

Build Type

push

github

Committed by Kane Shenton

Commit Message

feat: add curved-wave amplitude ratio (cw_ratio) path filtering

Parse FEFF's files.dat to extract the curved-wave chi amplitude ratio
for each scattering path and thread it through the full pipeline:

- feff_utils: add parse_files_dat() to read cw_ratio from files.dat
- hdf5_store: store and read cw_ratio as an HDF5 attribute per path
- exafs_data: add cw_ratio field to PathContribution; average across
  samples in PathAggregator.finalize(); add filter_path_contributions()
  utility (filters by min_cw_ratio threshold and/or top_n cap, preserving
  r_eff ordering among survivors)
- cli: add --min-cw-ratio option to both `analyze` and `pipeline` commands
- tests: add TestParseFilesDat and TestFilterPathContributions
- scripts: add pack_output_to_hdf5.py to import an existing
  pipeline_output/ tree into HDF5 without re-running FEFF
- README: document HDF5 output mode and the pack script

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59.57

/cli.py

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