23367229037

Committed 20 Mar 2026 11:54PM UTC coverage: 81.453% (-0.1%) from 81.58%

Build # 23367229037

Build Type

Pull #3877

github

Committed by

web-flow

Commit Message

Merge 7af343511 into 3ce6cbfdd

Pull Request Pull Request #3877: Add VTKHDF output support for all structured mesh types (#3620)

Run Details

17595 of 25365 branches covered (69.37%)

Branch coverage included in aggregate %.

128 of 133 new or added lines in 1 file covered. (96.24%)

372 existing lines in 15 files now uncovered.

58192 of 67679 relevant lines covered (85.98%)

44598959.65 hits per line

Source File
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86.73

/src/chain.cpp

//! \file chain.cpp
//! \brief Depletion chain and associated information

#include "openmc/chain.h"

#include <cstdlib> // for getenv
#include <memory>  // for make_unique
#include <string>  // for stod

#include <fmt/core.h>
#include <pugixml.hpp>

#include "openmc/distribution.h" // for distribution_from_xml
#include "openmc/error.h"
#include "openmc/reaction.h"
#include "openmc/xml_interface.h" // for get_node_value

namespace openmc {

//==============================================================================
// ChainNuclide implementation
//==============================================================================

ChainNuclide::ChainNuclide(pugi::xml_node node)
{
  name_ = get_node_value(node, "name");
  if (check_for_node(node, "half_life")) {
    half_life_ = std::stod(get_node_value(node, "half_life"));
  }
  if (check_for_node(node, "decay_energy")) {
    decay_energy_ = std::stod(get_node_value(node, "decay_energy"));
  }

  // Read reactions to store MT -> product map
  for (pugi::xml_node reaction_node : node.children("reaction")) {
    std::string rx_name = get_node_value(reaction_node, "type");
    if (!reaction_node.attribute("target"))
      continue;
    std::string rx_target = get_node_value(reaction_node, "target");
    double branching_ratio = 1.0;
    if (reaction_node.attribute("branching_ratio")) {
      branching_ratio =
        std::stod(get_node_value(reaction_node, "branching_ratio"));
    }
    int mt = reaction_mt(rx_name);
    reaction_products_[mt].push_back({rx_target, branching_ratio});
  }

  for (pugi::xml_node source_node : node.children("source")) {
    auto particle = get_node_value(source_node, "particle");
    if (particle == "photon") {
      photon_energy_ = distribution_from_xml(source_node);
      break;
    }
  }

  // Set entry in mapping
  data::chain_nuclide_map[name_] = data::chain_nuclides.size();
}

ChainNuclide::~ChainNuclide()
{
  data::chain_nuclide_map.erase(name_);
}

//==============================================================================
// DecayPhotonAngleEnergy implementation
//==============================================================================

void DecayPhotonAngleEnergy::sample(
  double E_in, double& E_out, double& mu, uint64_t* seed) const
{
  E_out = photon_energy_->sample(seed).first;
  mu = Uniform(-1., 1.).sample(seed).first;
}

double DecayPhotonAngleEnergy::sample_energy_and_pdf(
  double E_in, double mu, double& E_out, uint64_t* seed) const
{
  E_out = photon_energy_->sample(seed).first;
  return 0.5;
}

//==============================================================================
// Global variables
//==============================================================================

namespace data {

std::unordered_map<std::string, int> chain_nuclide_map;
vector<unique_ptr<ChainNuclide>> chain_nuclides;

} // namespace data

//==============================================================================
// Non-member functions
//==============================================================================

void read_chain_file_xml()
{
  char* chain_file_path = std::getenv("OPENMC_CHAIN_FILE");
  if (!chain_file_path) {
    return;
  }

  write_message(5, "Reading chain file: {}...", chain_file_path);

  pugi::xml_document doc;
  auto result = doc.load_file(chain_file_path);
  if (!result) {
    fatal_error(
      fmt::format("Error processing chain file: {}", chain_file_path));
  }

  // Get root element
  pugi::xml_node root = doc.document_element();

  for (auto node : root.children("nuclide")) {
    data::chain_nuclides.push_back(std::make_unique<ChainNuclide>(node));
  }
}

} // namespace openmc

1	//! \file chain.cpp
2	//! \brief Depletion chain and associated information
3
4	#include "openmc/chain.h"
5
6	#include <cstdlib> // for getenv
7	#include <memory> // for make_unique
8	#include <string> // for stod
9
10	#include <fmt/core.h>
11	#include <pugixml.hpp>
12
13	#include "openmc/distribution.h" // for distribution_from_xml
14	#include "openmc/error.h"
15	#include "openmc/reaction.h"
16	#include "openmc/xml_interface.h" // for get_node_value
17
18	namespace openmc {
19
20	//==============================================================================
21	// ChainNuclide implementation
22	//==============================================================================
23
24	ChainNuclide::ChainNuclide(pugi::xml_node node)	69,828✔
25	{
26	name_ = get_node_value(node, "name");	69,828✔
27	if (check_for_node(node, "half_life")) {	69,828✔
28	half_life_ = std::stod(get_node_value(node, "half_life"));	31,196✔
29	}
30	if (check_for_node(node, "decay_energy")) {	69,828✔
31	decay_energy_ = std::stod(get_node_value(node, "decay_energy"));	31,196✔
32	}
33
34	// Read reactions to store MT -> product map
35	for (pugi::xml_node reaction_node : node.children("reaction")) {	178,904✔
36	std::string rx_name = get_node_value(reaction_node, "type");	54,538✔
37	if (!reaction_node.attribute("target"))	54,538✔
38	continue;	23,320✔
39	std::string rx_target = get_node_value(reaction_node, "target");	31,218✔
40	double branching_ratio = 1.0;	31,218✔
41	if (reaction_node.attribute("branching_ratio")) {	31,218!
42	branching_ratio =	×
43	std::stod(get_node_value(reaction_node, "branching_ratio"));	×
44	}
45	int mt = reaction_mt(rx_name);	31,218✔
46	reaction_products_[mt].push_back({rx_target, branching_ratio});	31,218✔
47	}	54,538✔
48
49	for (pugi::xml_node source_node : node.children("source")) {	69,861✔
50	auto particle = get_node_value(source_node, "particle");	31,086✔
51	if (particle == "photon") {	31,086✔
52	photon_energy_ = distribution_from_xml(source_node);	31,053✔
53	break;	31,053✔
54	}
55	}	31,086✔
56
57	// Set entry in mapping
58	data::chain_nuclide_map[name_] = data::chain_nuclides.size();	69,828✔
59	}	69,828✔
60
61	ChainNuclide::~ChainNuclide()	69,828✔
62	{
63	data::chain_nuclide_map.erase(name_);	69,828✔
64	}	139,656✔
65
66	//==============================================================================
67	// DecayPhotonAngleEnergy implementation
68	//==============================================================================
69
70	void DecayPhotonAngleEnergy::sample(	54,725✔
71	double E_in, double& E_out, double& mu, uint64_t* seed) const
72	{
73	E_out = photon_energy_->sample(seed).first;	54,725✔
74	mu = Uniform(-1., 1.).sample(seed).first;	54,725✔
75	}	54,725✔
76
UNCOV 77	double DecayPhotonAngleEnergy::sample_energy_and_pdf(	×
78	double E_in, double mu, double& E_out, uint64_t* seed) const
79	{
UNCOV 80	E_out = photon_energy_->sample(seed).first;	×
UNCOV 81	return 0.5;	×
82	}
83
84	//==============================================================================
85	// Global variables
86	//==============================================================================
87
88	namespace data {
89
90	std::unordered_map<std::string, int> chain_nuclide_map;
91	vector<unique_ptr<ChainNuclide>> chain_nuclides;
92
93	} // namespace data
94
95	//==============================================================================
96	// Non-member functions
97	//==============================================================================
98
99	void read_chain_file_xml()	8,180✔
100	{
101	char* chain_file_path = std::getenv("OPENMC_CHAIN_FILE");	8,180✔
102	if (!chain_file_path) {	8,180✔
103	return;	436✔
104	}
105
106	write_message(5, "Reading chain file: {}...", chain_file_path);	7,744✔
107
108	pugi::xml_document doc;	7,744✔
109	auto result = doc.load_file(chain_file_path);	7,744✔
110	if (!result) {	7,744!
UNCOV 111	fatal_error(	×
UNCOV 112	fmt::format("Error processing chain file: {}", chain_file_path));	×
113	}
114
115	// Get root element
116	pugi::xml_node root = doc.document_element();	7,744✔
117
118	for (auto node : root.children("nuclide")) {	77,572✔
119	data::chain_nuclides.push_back(std::make_unique<ChainNuclide>(node));	139,656✔
120	}
121	}	7,744✔
122
123	} // namespace openmc

openmc-dev / openmc / 23367229037

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