22632853099

Committed 03 Mar 2026 04:35PM UTC coverage: 16.04% (+0.01%) from 16.03%

Build # 22632853099

Build Type

Pull #368

github

Committed by

web-flow

Commit Message

Merge dfe62f501 into 85e0af2dc

Pull Request Pull Request #368: Add Umami analytics support

Coverage Stats

701 of 5317 branches covered (13.18%)

Branch coverage included in aggregate %.

1727 of 9820 relevant lines covered (17.59%)

2.38 hits per line

Source File
Press 'n' to go to next uncovered line, 'b' for previous

86.79

src/main/java/com/knowledgepixels/nanodash/NanodashPreferences.java

package com.knowledgepixels.nanodash;

import com.fasterxml.jackson.databind.ObjectMapper;
import com.fasterxml.jackson.dataformat.yaml.YAMLFactory;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

import java.io.File;
import java.io.IOException;
import java.io.Serializable;
import java.util.ArrayList;
import java.util.Arrays;
import java.util.List;

/**
 * Class to manage Nanodash preferences.
 */
public class NanodashPreferences implements Serializable {

    private static NanodashPreferences obj;
    private static final Logger logger = LoggerFactory.getLogger(NanodashPreferences.class);

    /**
     * Get the singleton instance of NanodashPreferences.
     *
     * @return the NanodashPreferences instance
     */
    public static NanodashPreferences get() {
        if (obj == null) {
            File prefFile = new File(System.getProperty("user.home") + DEFAULT_SETTING_PATH);
            if (!prefFile.exists()) {
                return new NanodashPreferences();
            }
            ObjectMapper mapper = new ObjectMapper(new YAMLFactory());
            try {
                obj = mapper.readValue(prefFile, NanodashPreferences.class);
            } catch (IOException ex) {
                obj = new NanodashPreferences();
                logger.error("Could not read preferences file at '{}' using defaults", DEFAULT_SETTING_PATH, ex);
            }
        }
        return obj;
    }

    private List<String> nanopubActions = new ArrayList<>();
    private boolean readOnlyMode = false;
    private String websiteUrl = "http://localhost:37373/";
    private boolean orcidLoginMode = false;
    private String orcidClientId;
    private String orcidClientSecret;
    private String settingUri;
    private String umamiScriptUrl;
    private String umamiWebsiteId;
    public static final String DEFAULT_SETTING_PATH = "/.nanopub/nanodash-preferences.yml";

    /**
     * Return the list of nanopub actions.
     *
     * @return list of nanopub actions
     */
    public List<String> getNanopubActions() {
        String s = System.getenv("NANODASH_NANOPUB_ACTIONS");
        if (s != null && !s.isBlank()) {
            return Arrays.asList(s.split(" "));
        }
        return nanopubActions;
    }

    /**
     * Set the list of nanopub actions.
     *
     * @param nanopubActions the list of nanopub actions
     */
    public void setNanopubActions(List<String> nanopubActions) {
        this.nanopubActions = nanopubActions;
    }

    /**
     * Check if the application is in read-only mode.
     *
     * @return true if in read-only mode, false otherwise
     */
    public boolean isReadOnlyMode() {
        if ("true".equals(System.getenv("NANODASH_READ_ONLY_MODE"))) {
            logger.info("Found environment variable NANODASH_READ_ONLY_MODE with value: {}", true);
            return true;
        }
        logger.info("Environment variable NANODASH_READ_ONLY_MODE not set, using default: {}", readOnlyMode);
        return readOnlyMode;
    }

    /**
     * Set the read-only mode.
     *
     * @param readOnlyMode true to enable read-only mode, false to disable
     */
    public void setReadOnlyMode(boolean readOnlyMode) {
        this.readOnlyMode = readOnlyMode;
    }

    /**
     * Get the website URL.
     *
     * @return the website URL
     */
    public String getWebsiteUrl() {
        String s = System.getenv("NANODASH_WEBSITE_URL");
        if (s != null && !s.isBlank()) {
            logger.info("Found environment variable NANODASH_WEBSITE_URL with value: {}", s);
            return s;
        }
        logger.info("Environment variable NANODASH_WEBSITE_URL not set, using default: {}", websiteUrl);
        return websiteUrl;
    }

    /**
     * Set the website URL.
     *
     * @param websiteUrl the website URL to set
     */
    public void setWebsiteUrl(String websiteUrl) {
        this.websiteUrl = websiteUrl;
    }

    /**
     * Check if the application is in ORCID login mode.
     *
     * @return true if in ORCID login mode, false otherwise
     */
    public boolean isOrcidLoginMode() {
        if ("true".equals(System.getenv("NANODASH_ORCID_LOGIN_MODE"))) {
            logger.info("Found environment variable NANODASH_ORCID_LOGIN_MODE with value: {}", true);
            return true;
        }
        logger.info("Environment variable NANODASH_ORCID_LOGIN_MODE not set, using default: {}", orcidLoginMode);
        return orcidLoginMode;
    }

    /**
     * Set the ORCID login mode.
     *
     * @param orcidLoginMode true to enable ORCID login mode, false to disable
     */
    public void setOrcidLoginMode(boolean orcidLoginMode) {
        this.orcidLoginMode = orcidLoginMode;
    }

    /**
     * Get the ORCID client ID.
     *
     * @return the ORCID client ID
     */
    public String getOrcidClientId() {
        String s = System.getenv("NANOPUB_ORCID_CLIENT_ID");
        if (s != null && !s.isBlank()) {
            logger.info("Found environment variable NANOPUB_ORCID_CLIENT_ID with value: {}", s);
            return s;
        }
        logger.info("Environment variable NANOPUB_ORCID_CLIENT_ID not set, using default: {}", orcidClientId);
        return orcidClientId;
    }

    /**
     * Set the ORCID client ID.
     *
     * @param orcidClientId the ORCID client ID to set
     */
    public void setOrcidClientId(String orcidClientId) {
        this.orcidClientId = orcidClientId;
    }

    /**
     * Get the ORCID client secret.
     * .
     *
     * @return the ORCID client secret
     */
    public String getOrcidClientSecret() {
        String s = System.getenv("NANOPUB_ORCID_CLIENT_SECRET");
        if (s != null && !s.isBlank()) {
            logger.info("Found environment variable NANOPUB_ORCID_CLIENT_SECRET");
            return s;
        }
        logger.info("Environment variable NANOPUB_ORCID_CLIENT_SECRET not set, using default");
        return orcidClientSecret;
    }

    /**
     * Set the ORCID client secret.
     *
     * @param orcidClientSecret the ORCID client secret to set
     */
    public void setOrcidClientSecret(String orcidClientSecret) {
        this.orcidClientSecret = orcidClientSecret;
    }

    /**
     * Get the setting URI.
     *
     * @return the setting URI
     */
    public String getSettingUri() {
        return settingUri;
    }

    /**
     * Set the setting URI.
     *
     * @param settingUri the setting URI to set
     */
    public void setSettingUri(String settingUri) {
        this.settingUri = settingUri;
    }

    /**
     * Get the Umami analytics script URL.
     *
     * @return the Umami script URL, or null if not configured
     */
    public String getUmamiScriptUrl() {
        String s = System.getenv("NANODASH_UMAMI_SCRIPT_URL");
        if (s != null && !s.isBlank()) return s;
        return umamiScriptUrl;
    }

    /**
     * Set the Umami analytics script URL.
     *
     * @param umamiScriptUrl the Umami script URL to set
     */
    public void setUmamiScriptUrl(String umamiScriptUrl) {
        this.umamiScriptUrl = umamiScriptUrl;
    }

    /**
     * Get the Umami analytics website ID.
     *
     * @return the Umami website ID, or null if not configured
     */
    public String getUmamiWebsiteId() {
        String s = System.getenv("NANODASH_UMAMI_WEBSITE_ID");
        if (s != null && !s.isBlank()) return s;
        return umamiWebsiteId;
    }

    /**
     * Set the Umami analytics website ID.
     *
     * @param umamiWebsiteId the Umami website ID to set
     */
    public void setUmamiWebsiteId(String umamiWebsiteId) {
        this.umamiWebsiteId = umamiWebsiteId;
    }

}

1	package com.knowledgepixels.nanodash;
2
3	import com.fasterxml.jackson.databind.ObjectMapper;
4	import com.fasterxml.jackson.dataformat.yaml.YAMLFactory;
5	import org.slf4j.Logger;
6	import org.slf4j.LoggerFactory;
7
8	import java.io.File;
9	import java.io.IOException;
10	import java.io.Serializable;
11	import java.util.ArrayList;
12	import java.util.Arrays;
13	import java.util.List;
14
15	/**
16	* Class to manage Nanodash preferences.
17	*/
18	public class NanodashPreferences implements Serializable {	6✔
19
20	private static NanodashPreferences obj;
21	private static final Logger logger = LoggerFactory.getLogger(NanodashPreferences.class);	12✔
22
23	/**
24	* Get the singleton instance of NanodashPreferences.
25	*
26	* @return the NanodashPreferences instance
27	*/
28	public static NanodashPreferences get() {
29	if (obj == null) {	6✔
30	File prefFile = new File(System.getProperty("user.home") + DEFAULT_SETTING_PATH);	21✔
31	if (!prefFile.exists()) {	9✔
32	return new NanodashPreferences();	12✔
33	}
34	ObjectMapper mapper = new ObjectMapper(new YAMLFactory());	21✔
35	try {
36	obj = mapper.readValue(prefFile, NanodashPreferences.class);	18✔
37	} catch (IOException ex) {	3✔
38	obj = new NanodashPreferences();	12✔
39	logger.error("Could not read preferences file at '{}' using defaults", DEFAULT_SETTING_PATH, ex);	15✔
40	}	3✔
41	}
42	return obj;	6✔
43	}
44
45	private List<String> nanopubActions = new ArrayList<>();	15✔
46	private boolean readOnlyMode = false;	9✔
47	private String websiteUrl = "http://localhost:37373/";	9✔
48	private boolean orcidLoginMode = false;	12✔
49	private String orcidClientId;
50	private String orcidClientSecret;
51	private String settingUri;
52	private String umamiScriptUrl;
53	private String umamiWebsiteId;
54	public static final String DEFAULT_SETTING_PATH = "/.nanopub/nanodash-preferences.yml";
55
56	/**
57	* Return the list of nanopub actions.
58	*
59	* @return list of nanopub actions
60	*/
61	public List<String> getNanopubActions() {
62	String s = System.getenv("NANODASH_NANOPUB_ACTIONS");	9✔
63	if (s != null && !s.isBlank()) {	15✔
64	return Arrays.asList(s.split(" "));	15✔
65	}
66	return nanopubActions;	9✔
67	}
68
69	/**
70	* Set the list of nanopub actions.
71	*
72	* @param nanopubActions the list of nanopub actions
73	*/
74	public void setNanopubActions(List<String> nanopubActions) {
75	this.nanopubActions = nanopubActions;	9✔
76	}	3✔
77
78	/**
79	* Check if the application is in read-only mode.
80	*
81	* @return true if in read-only mode, false otherwise
82	*/
83	public boolean isReadOnlyMode() {
84	if ("true".equals(System.getenv("NANODASH_READ_ONLY_MODE"))) {	15✔
85	logger.info("Found environment variable NANODASH_READ_ONLY_MODE with value: {}", true);	15✔
86	return true;	6✔
87	}
88	logger.info("Environment variable NANODASH_READ_ONLY_MODE not set, using default: {}", readOnlyMode);	18✔
89	return readOnlyMode;	9✔
90	}
91
92	/**
93	* Set the read-only mode.
94	*
95	* @param readOnlyMode true to enable read-only mode, false to disable
96	*/
97	public void setReadOnlyMode(boolean readOnlyMode) {
98	this.readOnlyMode = readOnlyMode;	9✔
99	}	3✔
100
101	/**
102	* Get the website URL.
103	*
104	* @return the website URL
105	*/
106	public String getWebsiteUrl() {
107	String s = System.getenv("NANODASH_WEBSITE_URL");	9✔
108	if (s != null && !s.isBlank()) {	15✔
109	logger.info("Found environment variable NANODASH_WEBSITE_URL with value: {}", s);	12✔
110	return s;	6✔
111	}
112	logger.info("Environment variable NANODASH_WEBSITE_URL not set, using default: {}", websiteUrl);	15✔
113	return websiteUrl;	9✔
114	}
115
116	/**
117	* Set the website URL.
118	*
119	* @param websiteUrl the website URL to set
120	*/
121	public void setWebsiteUrl(String websiteUrl) {
122	this.websiteUrl = websiteUrl;	9✔
123	}	3✔
124
125	/**
126	* Check if the application is in ORCID login mode.
127	*
128	* @return true if in ORCID login mode, false otherwise
129	*/
130	public boolean isOrcidLoginMode() {
131	if ("true".equals(System.getenv("NANODASH_ORCID_LOGIN_MODE"))) {	15✔
132	logger.info("Found environment variable NANODASH_ORCID_LOGIN_MODE with value: {}", true);	15✔
133	return true;	6✔
134	}
135	logger.info("Environment variable NANODASH_ORCID_LOGIN_MODE not set, using default: {}", orcidLoginMode);	18✔
136	return orcidLoginMode;	9✔
137	}
138
139	/**
140	* Set the ORCID login mode.
141	*
142	* @param orcidLoginMode true to enable ORCID login mode, false to disable
143	*/
144	public void setOrcidLoginMode(boolean orcidLoginMode) {
145	this.orcidLoginMode = orcidLoginMode;	9✔
146	}	3✔
147
148	/**
149	* Get the ORCID client ID.
150	*
151	* @return the ORCID client ID
152	*/
153	public String getOrcidClientId() {
154	String s = System.getenv("NANOPUB_ORCID_CLIENT_ID");	9✔
155	if (s != null && !s.isBlank()) {	15✔
156	logger.info("Found environment variable NANOPUB_ORCID_CLIENT_ID with value: {}", s);	12✔
157	return s;	6✔
158	}
159	logger.info("Environment variable NANOPUB_ORCID_CLIENT_ID not set, using default: {}", orcidClientId);	15✔
160	return orcidClientId;	9✔
161	}
162
163	/**
164	* Set the ORCID client ID.
165	*
166	* @param orcidClientId the ORCID client ID to set
167	*/
168	public void setOrcidClientId(String orcidClientId) {
169	this.orcidClientId = orcidClientId;	9✔
170	}	3✔
171
172	/**
173	* Get the ORCID client secret.
174	* .
175	*
176	* @return the ORCID client secret
177	*/
178	public String getOrcidClientSecret() {
179	String s = System.getenv("NANOPUB_ORCID_CLIENT_SECRET");	9✔
180	if (s != null && !s.isBlank()) {	15✔
181	logger.info("Found environment variable NANOPUB_ORCID_CLIENT_SECRET");	9✔
182	return s;	6✔
183	}
184	logger.info("Environment variable NANOPUB_ORCID_CLIENT_SECRET not set, using default");	9✔
185	return orcidClientSecret;	9✔
186	}
187
188	/**
189	* Set the ORCID client secret.
190	*
191	* @param orcidClientSecret the ORCID client secret to set
192	*/
193	public void setOrcidClientSecret(String orcidClientSecret) {
194	this.orcidClientSecret = orcidClientSecret;	9✔
195	}	3✔
196
197	/**
198	* Get the setting URI.
199	*
200	* @return the setting URI
201	*/
202	public String getSettingUri() {
203	return settingUri;	9✔
204	}
205
206	/**
207	* Set the setting URI.
208	*
209	* @param settingUri the setting URI to set
210	*/
211	public void setSettingUri(String settingUri) {
212	this.settingUri = settingUri;	9✔
213	}	3✔
214
215	/**
216	* Get the Umami analytics script URL.
217	*
218	* @return the Umami script URL, or null if not configured
219	*/
220	public String getUmamiScriptUrl() {
221	String s = System.getenv("NANODASH_UMAMI_SCRIPT_URL");	9✔
222	if (s != null && !s.isBlank()) return s;	6!
223	return umamiScriptUrl;	9✔
224	}
225
226	/**
227	* Set the Umami analytics script URL.
228	*
229	* @param umamiScriptUrl the Umami script URL to set
230	*/
231	public void setUmamiScriptUrl(String umamiScriptUrl) {
232	this.umamiScriptUrl = umamiScriptUrl;	×
233	}	×
234
235	/**
236	* Get the Umami analytics website ID.
237	*
238	* @return the Umami website ID, or null if not configured
239	*/
240	public String getUmamiWebsiteId() {
241	String s = System.getenv("NANODASH_UMAMI_WEBSITE_ID");	×
242	if (s != null && !s.isBlank()) return s;	×
243	return umamiWebsiteId;	×
244	}
245
246	/**
247	* Set the Umami analytics website ID.
248	*
249	* @param umamiWebsiteId the Umami website ID to set
250	*/
251	public void setUmamiWebsiteId(String umamiWebsiteId) {
252	this.umamiWebsiteId = umamiWebsiteId;	×
253	}	×
254
255	}

knowledgepixels / nanodash / 22632853099

Source File Press 'n' to go to next uncovered line, 'b' for previous

Source File
Press 'n' to go to next uncovered line, 'b' for previous