22309839160

Committed 23 Feb 2026 02:14PM UTC coverage: 70.629% (-0.3%) from 70.899%

Build # 22309839160

Build Type

push

github

Committed by

tkuhn

Commit Message

Adjust Accept header Media types for Construct queries

Run Details

215 of 328 branches covered (65.55%)

Branch coverage included in aggregate %.

593 of 816 relevant lines covered (72.67%)

10.94 hits per line

Source File
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68.06

src/main/java/com/knowledgepixels/query/OpenApiSpecPage.java

package com.knowledgepixels.query;

import com.knowledgepixels.query.GrlcSpec.InvalidGrlcSpecException;
import io.vertx.core.MultiMap;
import org.yaml.snakeyaml.DumperOptions;
import org.yaml.snakeyaml.Yaml;

import java.util.*;

/**
 * Page for Open API compliant specification.
 */
public class OpenApiSpecPage {

    private Map<String, Object> dataMap = new LinkedHashMap<>();

    /**
     * Creates a new page instance.
     *
     * @param requestUrl The request URL
     * @param parameters The URL request parameters
     * @throws InvalidGrlcSpecException If the GRLC specification is invalid
     */
    public OpenApiSpecPage(String requestUrl, MultiMap parameters) throws InvalidGrlcSpecException {
        GrlcSpec grlcSpec = new GrlcSpec(requestUrl, parameters);


        dataMap.put("openapi", "3.0.4");

        Map<String, Object> infoMap = new LinkedHashMap<>();
        infoMap.put("title", grlcSpec.getLabel());
        infoMap.put("description", "API definition source: <a target=\"_blank\" href=\"" + grlcSpec.getNanopub().getUri() +
                                   "\"><svg height=\"0.8em\" xmlns=\"http://www.w3.org/2000/svg\" viewBox=\"0 0 8 8\"><path d=\"M5,8H8L3,0H0M8,4.8V0H5M0,3.2V8H3\"/></svg> " +
                                   grlcSpec.getArtifactCode().substring(0, 10) + "</a>");
        infoMap.put("version", grlcSpec.getArtifactCode().substring(0, 10));
        dataMap.put("info", infoMap);

        List<Object> serversList = new ArrayList<>();
        Map<String, Object> serverMap = new LinkedHashMap<>();
        serverMap.put("url", Utils.getEnvString("NANOPUB_QUERY_URL", "http://localhost:9393/") + "api/" + grlcSpec.getArtifactCode());
        serverMap.put("description", "This Nanopub Query instance");
        serversList.add(serverMap);
        dataMap.put("servers", serversList);

        Map<String, Object> pathsMap = new LinkedHashMap<>();
        Map<String, Object> rootPathMap = new LinkedHashMap<>();
        Map<String, Object> getOpMap = new LinkedHashMap<>();
        //getOpMap.put("summary", label);
        getOpMap.put("description", grlcSpec.getDescription());
        Map<String, Object> responsesMap = new LinkedHashMap<>();
        Map<String, Object> successrespMap = new LinkedHashMap<>();
        Map<String, Object> contentMap = new LinkedHashMap<>();
        if (grlcSpec.isConstructQuery()) {
            contentMap.put("text/turtle", new HashMap<>());
            contentMap.put("application/ld+json", new HashMap<>());
            contentMap.put("application/n-triples", new HashMap<>());
            contentMap.put("application/trix", new HashMap<>());
            contentMap.put("application/xml", new HashMap<>());
        } else {
            contentMap.put("text/csv", new HashMap<>());
            contentMap.put("application/json", new HashMap<>());
            contentMap.put("application/xml", new HashMap<>());
        }
        successrespMap.put("content", contentMap);
        successrespMap.put("description", "result table");
        responsesMap.put("200", successrespMap);
        List<Object> parametersList = new ArrayList<>();

        final Map<String, Object> stringType = new LinkedHashMap<>();
        stringType.put("type", "string");
        final Map<String, Object> stringListType = new LinkedHashMap<>();
        stringListType.put("type", "array");
        stringListType.put("items", stringType);

        for (String p : grlcSpec.getPlaceholdersList()) {
            Map<String, Object> paramMap = new LinkedHashMap<>();
            paramMap.put("in", "query");
            String name = GrlcSpec.getParamName(p);
            paramMap.put("name", name);
            paramMap.put("required", !GrlcSpec.isOptionalPlaceholder(p));
            if (GrlcSpec.isMultiPlaceholder(p)) {
                paramMap.put("style", "form");
                paramMap.put("explde", "true");
                paramMap.put("schema", stringListType);
            } else {
                paramMap.put("schema", stringType);
            }
            parametersList.add(paramMap);
        }
        getOpMap.put("parameters", parametersList);
        getOpMap.put("responses", responsesMap);
        rootPathMap.put("get", getOpMap);
        pathsMap.put("/" + grlcSpec.getQueryName(), rootPathMap);
        dataMap.put("paths", pathsMap);
    }

    /**
     * Returns the Open API spec as a string.
     *
     * @return Open API specification string
     */
    public String getSpec() {
        final DumperOptions options = new DumperOptions();
        options.setDefaultFlowStyle(DumperOptions.FlowStyle.BLOCK);
        options.setPrettyFlow(true);
        return new Yaml(options).dump(dataMap);
    }

}

1	package com.knowledgepixels.query;
2
3	import com.knowledgepixels.query.GrlcSpec.InvalidGrlcSpecException;
4	import io.vertx.core.MultiMap;
5	import org.yaml.snakeyaml.DumperOptions;
6	import org.yaml.snakeyaml.Yaml;
7
8	import java.util.*;
9
10	/**
11	* Page for Open API compliant specification.
12	*/
13	public class OpenApiSpecPage {
14
15	private Map<String, Object> dataMap = new LinkedHashMap<>();	15✔
16
17	/**
18	* Creates a new page instance.
19	*
20	* @param requestUrl The request URL
21	* @param parameters The URL request parameters
22	* @throws InvalidGrlcSpecException If the GRLC specification is invalid
23	*/
24	public OpenApiSpecPage(String requestUrl, MultiMap parameters) throws InvalidGrlcSpecException {	6✔
25	GrlcSpec grlcSpec = new GrlcSpec(requestUrl, parameters);	18✔
26
27
28	dataMap.put("openapi", "3.0.4");	18✔
29
30	Map<String, Object> infoMap = new LinkedHashMap<>();	12✔
31	infoMap.put("title", grlcSpec.getLabel());	18✔
32	infoMap.put("description", "API definition source: <a target=\"_blank\" href=\"" + grlcSpec.getNanopub().getUri() +	27✔
33	"\"><svg height=\"0.8em\" xmlns=\"http://www.w3.org/2000/svg\" viewBox=\"0 0 8 8\"><path d=\"M5,8H8L3,0H0M8,4.8V0H5M0,3.2V8H3\"/></svg> " +
34	grlcSpec.getArtifactCode().substring(0, 10) + "</a>");	15✔
35	infoMap.put("version", grlcSpec.getArtifactCode().substring(0, 10));	27✔
36	dataMap.put("info", infoMap);	18✔
37
38	List<Object> serversList = new ArrayList<>();	12✔
39	Map<String, Object> serverMap = new LinkedHashMap<>();	12✔
40	serverMap.put("url", Utils.getEnvString("NANOPUB_QUERY_URL", "http://localhost:9393/") + "api/" + grlcSpec.getArtifactCode());	30✔
41	serverMap.put("description", "This Nanopub Query instance");	15✔
42	serversList.add(serverMap);	12✔
43	dataMap.put("servers", serversList);	18✔
44
45	Map<String, Object> pathsMap = new LinkedHashMap<>();	12✔
46	Map<String, Object> rootPathMap = new LinkedHashMap<>();	12✔
47	Map<String, Object> getOpMap = new LinkedHashMap<>();	12✔
48	//getOpMap.put("summary", label);
49	getOpMap.put("description", grlcSpec.getDescription());	18✔
50	Map<String, Object> responsesMap = new LinkedHashMap<>();	12✔
51	Map<String, Object> successrespMap = new LinkedHashMap<>();	12✔
52	Map<String, Object> contentMap = new LinkedHashMap<>();	12✔
53	if (grlcSpec.isConstructQuery()) {	9!
54	contentMap.put("text/turtle", new HashMap<>());	×
55	contentMap.put("application/ld+json", new HashMap<>());	×
56	contentMap.put("application/n-triples", new HashMap<>());	×
57	contentMap.put("application/trix", new HashMap<>());	×
58	contentMap.put("application/xml", new HashMap<>());	×
59	} else {
60	contentMap.put("text/csv", new HashMap<>());	21✔
61	contentMap.put("application/json", new HashMap<>());	21✔
62	contentMap.put("application/xml", new HashMap<>());	21✔
63	}
64	successrespMap.put("content", contentMap);	15✔
65	successrespMap.put("description", "result table");	15✔
66	responsesMap.put("200", successrespMap);	15✔
67	List<Object> parametersList = new ArrayList<>();	12✔
68
69	final Map<String, Object> stringType = new LinkedHashMap<>();	12✔
70	stringType.put("type", "string");	15✔
71	final Map<String, Object> stringListType = new LinkedHashMap<>();	12✔
72	stringListType.put("type", "array");	15✔
73	stringListType.put("items", stringType);	15✔
74
75	for (String p : grlcSpec.getPlaceholdersList()) {	21!
76	Map<String, Object> paramMap = new LinkedHashMap<>();	×
77	paramMap.put("in", "query");	×
78	String name = GrlcSpec.getParamName(p);	×
79	paramMap.put("name", name);	×
80	paramMap.put("required", !GrlcSpec.isOptionalPlaceholder(p));	×
81	if (GrlcSpec.isMultiPlaceholder(p)) {	×
82	paramMap.put("style", "form");	×
83	paramMap.put("explde", "true");	×
84	paramMap.put("schema", stringListType);	×
85	} else {
86	paramMap.put("schema", stringType);	×
87	}
88	parametersList.add(paramMap);	×
89	}	×
90	getOpMap.put("parameters", parametersList);	15✔
91	getOpMap.put("responses", responsesMap);	15✔
92	rootPathMap.put("get", getOpMap);	15✔
93	pathsMap.put("/" + grlcSpec.getQueryName(), rootPathMap);	21✔
94	dataMap.put("paths", pathsMap);	18✔
95	}	3✔
96
97	/**
98	* Returns the Open API spec as a string.
99	*
100	* @return Open API specification string
101	*/
102	public String getSpec() {
103	final DumperOptions options = new DumperOptions();	12✔
104	options.setDefaultFlowStyle(DumperOptions.FlowStyle.BLOCK);	9✔
105	options.setPrettyFlow(true);	9✔
106	return new Yaml(options).dump(dataMap);	24✔
107	}
108
109	}

knowledgepixels / nanopub-query / 22309839160

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