21596202545

Committed 02 Feb 2026 03:29PM UTC coverage: 14.306% (+0.02%) from 14.286%

Build # 21596202545

Build Type

push

github

Committed by

web-flow

Commit Message

Merge pull request #349 from knowledgepixels/343-domain-model-refactor

Domain model refactor to avoid confusion around different meanings

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570 of 5258 branches covered (10.84%)

Branch coverage included in aggregate %.

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0.0

src/main/java/com/knowledgepixels/nanodash/page/ResourcePartPage.java

package com.knowledgepixels.nanodash.page;

import com.knowledgepixels.nanodash.*;
import com.knowledgepixels.nanodash.component.ButtonList;
import com.knowledgepixels.nanodash.component.TitleBar;
import com.knowledgepixels.nanodash.component.ViewList;
import org.apache.wicket.Component;
import org.apache.wicket.extensions.ajax.markup.html.AjaxLazyLoadPanel;
import org.apache.wicket.markup.html.basic.Label;
import org.apache.wicket.markup.html.link.AbstractLink;
import org.apache.wicket.markup.html.link.BookmarkablePageLink;
import org.apache.wicket.model.Model;
import org.apache.wicket.request.mapper.parameter.PageParameters;
import org.eclipse.rdf4j.model.IRI;
import org.eclipse.rdf4j.model.Statement;
import org.eclipse.rdf4j.model.vocabulary.DCTERMS;
import org.eclipse.rdf4j.model.vocabulary.RDF;
import org.eclipse.rdf4j.model.vocabulary.RDFS;
import org.eclipse.rdf4j.model.vocabulary.SKOS;
import org.nanopub.Nanopub;
import org.nanopub.extra.services.ApiResponse;
import org.nanopub.extra.services.QueryRef;

import java.util.ArrayList;
import java.util.HashSet;
import java.util.List;
import java.util.Set;

/**
 * This class represents a page for a resource part in the context of a maintained resource, space, or user.
 */
public class ResourcePartPage extends NanodashPage {

    /**
     * The mount path for this page.
     */
    public static final String MOUNT_PATH = "/part";

    /**
     * {@inheritDoc}
     */
    @Override
    public String getMountPath() {
        return MOUNT_PATH;
    }

    /**
     * Resource with profile (Space or MaintainedResource) object with the data shown on this page.
     */
    private ResourceWithProfile resourceWithProfile;

    public ResourcePartPage(final PageParameters parameters) {
        super(parameters);

        final String id = parameters.get("id").toString();
        final String contextId = parameters.get("context").toString();
        final String nanopubId;
        String label = id.replaceFirst("^.*[#/]([^#/]+)$", "$1");
        String description = null;
        Set<IRI> classes = new HashSet<>();

        resourceWithProfile = MaintainedResource.get(contextId);
        if (resourceWithProfile == null) {
            if (Space.get(contextId) != null) {
                resourceWithProfile = Space.get(contextId);
            } else if (User.isUser(contextId)) {
                resourceWithProfile = IndividualAgent.get(contextId);
            } else {
                throw new IllegalArgumentException("Not a resource, space, or user: " + contextId);
            }
        }

        QueryRef getDefQuery = new QueryRef("get-term-definitions", "term", id);
        if (resourceWithProfile.getSpace() != null) {
            for (IRI userIri : resourceWithProfile.getSpace().getUsers()) {
                for (String pubkey : User.getUserData().getPubkeyhashes(userIri, true)) {
                    getDefQuery.getParams().put("pubkey", pubkey);
                }
            }
        } else {
            for (String pubkey : User.getUserData().getPubkeyhashes(Utils.vf.createIRI(contextId), true)) {
                getDefQuery.getParams().put("pubkey", pubkey);
            }
        }

        ApiResponse getDefResp = ApiCache.retrieveResponseSync(getDefQuery, false);
        if (getDefResp != null && !getDefResp.getData().isEmpty()) {
            nanopubId = getDefResp.getData().iterator().next().get("np");

            Nanopub nanopub = Utils.getAsNanopub(nanopubId);
            for (Statement st : nanopub.getAssertion()) {
                if (!st.getSubject().stringValue().equals(id)) {
                    continue;
                }
                if (st.getPredicate().equals(RDFS.LABEL)) {
                    label = st.getObject().stringValue();
                }
                if (st.getPredicate().equals(SKOS.DEFINITION) || st.getPredicate().equals(DCTERMS.DESCRIPTION) || st.getPredicate().equals(RDFS.COMMENT)) {
                    description = st.getObject().stringValue();
                }
                if (st.getPredicate().equals(RDF.TYPE) && st.getObject() instanceof IRI objIri) {
                    classes.add(objIri);
                }
            }
        } else {
            nanopubId = null;
        }
//        if (getDefResp == null || getDefResp.getData().isEmpty()) {
//            throw new RestartResponseException(ExplorePage.class, parameters);
//        }

        if (description != null) {
            add(new Label("description", description));
        } else {
            add(new Label("description").setVisible(false));
        }

        List<NanodashPageRef> breadCrumb;
        if (resourceWithProfile.getSpace() != null) {
            List<ResourceWithProfile> superSpaces = resourceWithProfile.getSpace().getAllSuperSpacesUntilRoot();
            if (resourceWithProfile instanceof MaintainedResource) {
                superSpaces.add(resourceWithProfile.getSpace());
            }
            superSpaces.add(resourceWithProfile);
            breadCrumb = new ArrayList<>(superSpaces.stream().map(ss -> new NanodashPageRef(SpacePage.class, new PageParameters().add("id", ss.getId()), ss.getLabel())).toList());
        } else {
            breadCrumb = new ArrayList<>();
            breadCrumb.add(new NanodashPageRef(UserPage.class, new PageParameters().add("id", contextId), resourceWithProfile.getLabel()));
        }
        breadCrumb.add(new NanodashPageRef(ResourcePartPage.class, new PageParameters().add("id", id).add("context", contextId).add("label", label), label));
        NanodashPageRef[] breadCrumbArray = breadCrumb.toArray(new NanodashPageRef[0]);
        add(new TitleBar("titlebar", this, null,
                breadCrumbArray
        ));

        add(new Label("pagetitle", label + " (resource part) | nanodash"));
        add(new Label("name", label));
        add(new BookmarkablePageLink<Void>("id", ExplorePage.class, parameters.set("label", label)).setBody(Model.of(id)));
        add(new BookmarkablePageLink<Void>("np", ExplorePage.class, new PageParameters().set("id", nanopubId == null ? id : nanopubId)));

        // TODO Improve this code, e.g. make Space a subclass of MaintainedResource or otherwise refactor:
        // we now use the ProfileResource abstraction, but the code still has to be imprved
        if (resourceWithProfile != null) {
            final List<AbstractLink> viewButtons = new ArrayList<>();
            AbstractLink addViewButton = new BookmarkablePageLink<NanodashPage>("button", PublishPage.class, new PageParameters()
                    .set("template", "https://w3id.org/np/RAPxKWDTDP4neVtRckQcTqKHqCC_GHWWPrs7DESb2BJjo")
                    .set("template-version", "latest")
                    .set("param_resource", resourceWithProfile.getId())
                    .set("context", resourceWithProfile.getId())
                    .set("part", id)
            );
            addViewButton.setBody(Model.of("+ view"));
            viewButtons.add(addViewButton);

            final String nanopubRef = nanopubId == null ? "x:" : nanopubId;
            if (resourceWithProfile.isDataInitialized()) {
                add(new ViewList("views", resourceWithProfile, id, nanopubRef, classes));
                add(new ButtonList("view-buttons", resourceWithProfile.getSpace() != null ? resourceWithProfile.getSpace() : resourceWithProfile, null, null, viewButtons));
            } else {
                add(new AjaxLazyLoadPanel<Component>("views") {

                    @Override
                    public Component getLazyLoadComponent(String markupId) {
                        return new ViewList(markupId, resourceWithProfile, id, nanopubRef, classes);
                    }

                    @Override
                    protected boolean isContentReady() {
                        return resourceWithProfile.isDataInitialized();
                    }

                });
                add(new AjaxLazyLoadPanel<Component>("view-buttons") {

                    @Override
                    public Component getLazyLoadComponent(String markupId) {
                        return new ButtonList(markupId, resourceWithProfile.getSpace() != null ? resourceWithProfile.getSpace() : resourceWithProfile, null, null, viewButtons);
                    }

                    @Override
                    protected boolean isContentReady() {
                        return resourceWithProfile.isDataInitialized();
                    }

                    public Component getLoadingComponent(String id) {
                        return new Label(id).setVisible(false);
                    }

                });
            }
        } else {
            // TODO Ugly code duplication (see above):

            final List<AbstractLink> viewButtons = new ArrayList<>();
            AbstractLink addViewButton = new BookmarkablePageLink<NanodashPage>("button", PublishPage.class, new PageParameters()
                    .set("template", "https://w3id.org/np/RAPxKWDTDP4neVtRckQcTqKHqCC_GHWWPrs7DESb2BJjo")
                    .set("template-version", "latest")
                    .set("param_resource", resourceWithProfile.getSpace().getId())
                    .set("context", resourceWithProfile.getSpace().getId())
                    .set("part", id)
            );
            addViewButton.setBody(Model.of("+ view"));
            viewButtons.add(addViewButton);

            if (resourceWithProfile.getSpace().isDataInitialized()) {
                add(new ViewList("views", resourceWithProfile.getSpace(), id, nanopubId, classes));
                add(new ButtonList("view-buttons", resourceWithProfile.getSpace(), null, null, viewButtons));
            } else {
                add(new AjaxLazyLoadPanel<Component>("views") {

                    @Override
                    public Component getLazyLoadComponent(String markupId) {
                        return new ViewList(markupId, resourceWithProfile.getSpace(), id, nanopubId, classes);
                    }

                    @Override
                    protected boolean isContentReady() {
                        return resourceWithProfile.getSpace().isDataInitialized();
                    }

                });
                add(new AjaxLazyLoadPanel<Component>("view-buttons") {

                    @Override
                    public Component getLazyLoadComponent(String markupId) {
                        return new ButtonList(markupId, resourceWithProfile.getSpace(), null, null, viewButtons);
                    }

                    @Override
                    protected boolean isContentReady() {
                        return resourceWithProfile.getSpace().isDataInitialized();
                    }

                    public Component getLoadingComponent(String id) {
                        return new Label(id).setVisible(false);
                    }

                });
            }
        }
    }

    /**
     * Checks if auto-refresh is enabled for this page.
     *
     * @return true if auto-refresh is enabled, false otherwise
     */
    protected boolean hasAutoRefreshEnabled() {
        return true;
    }

}

1	package com.knowledgepixels.nanodash.page;
2
3	import com.knowledgepixels.nanodash.*;
4	import com.knowledgepixels.nanodash.component.ButtonList;
5	import com.knowledgepixels.nanodash.component.TitleBar;
6	import com.knowledgepixels.nanodash.component.ViewList;
7	import org.apache.wicket.Component;
8	import org.apache.wicket.extensions.ajax.markup.html.AjaxLazyLoadPanel;
9	import org.apache.wicket.markup.html.basic.Label;
10	import org.apache.wicket.markup.html.link.AbstractLink;
11	import org.apache.wicket.markup.html.link.BookmarkablePageLink;
12	import org.apache.wicket.model.Model;
13	import org.apache.wicket.request.mapper.parameter.PageParameters;
14	import org.eclipse.rdf4j.model.IRI;
15	import org.eclipse.rdf4j.model.Statement;
16	import org.eclipse.rdf4j.model.vocabulary.DCTERMS;
17	import org.eclipse.rdf4j.model.vocabulary.RDF;
18	import org.eclipse.rdf4j.model.vocabulary.RDFS;
19	import org.eclipse.rdf4j.model.vocabulary.SKOS;
20	import org.nanopub.Nanopub;
21	import org.nanopub.extra.services.ApiResponse;
22	import org.nanopub.extra.services.QueryRef;
23
24	import java.util.ArrayList;
25	import java.util.HashSet;
26	import java.util.List;
27	import java.util.Set;
28
29	/**
30	* This class represents a page for a resource part in the context of a maintained resource, space, or user.
31	*/
32	public class ResourcePartPage extends NanodashPage {
33
34	/**
35	* The mount path for this page.
36	*/
37	public static final String MOUNT_PATH = "/part";
38
39	/**
40	* {@inheritDoc}
41	*/
42	@Override
43	public String getMountPath() {
44	return MOUNT_PATH;	×
45	}
46
47	/**
48	* Resource with profile (Space or MaintainedResource) object with the data shown on this page.
49	*/
50	private ResourceWithProfile resourceWithProfile;
51
52	public ResourcePartPage(final PageParameters parameters) {
53	super(parameters);	×
54
55	final String id = parameters.get("id").toString();	×
56	final String contextId = parameters.get("context").toString();	×
57	final String nanopubId;
58	String label = id.replaceFirst("^.*[#/]([^#/]+)$", "$1");	×
59	String description = null;	×
60	Set<IRI> classes = new HashSet<>();	×
61
62	resourceWithProfile = MaintainedResource.get(contextId);	×
63	if (resourceWithProfile == null) {	×
64	if (Space.get(contextId) != null) {	×
65	resourceWithProfile = Space.get(contextId);	×
66	} else if (User.isUser(contextId)) {	×
67	resourceWithProfile = IndividualAgent.get(contextId);	×
68	} else {
69	throw new IllegalArgumentException("Not a resource, space, or user: " + contextId);	×
70	}
71	}
72
73	QueryRef getDefQuery = new QueryRef("get-term-definitions", "term", id);	×
74	if (resourceWithProfile.getSpace() != null) {	×
75	for (IRI userIri : resourceWithProfile.getSpace().getUsers()) {	×
76	for (String pubkey : User.getUserData().getPubkeyhashes(userIri, true)) {	×
77	getDefQuery.getParams().put("pubkey", pubkey);	×
78	}	×
79	}	×
80	} else {
81	for (String pubkey : User.getUserData().getPubkeyhashes(Utils.vf.createIRI(contextId), true)) {	×
82	getDefQuery.getParams().put("pubkey", pubkey);	×
83	}	×
84	}
85
86	ApiResponse getDefResp = ApiCache.retrieveResponseSync(getDefQuery, false);	×
87	if (getDefResp != null && !getDefResp.getData().isEmpty()) {	×
88	nanopubId = getDefResp.getData().iterator().next().get("np");	×
89
90	Nanopub nanopub = Utils.getAsNanopub(nanopubId);	×
91	for (Statement st : nanopub.getAssertion()) {	×
92	if (!st.getSubject().stringValue().equals(id)) {	×
93	continue;	×
94	}
95	if (st.getPredicate().equals(RDFS.LABEL)) {	×
96	label = st.getObject().stringValue();	×
97	}
98	if (st.getPredicate().equals(SKOS.DEFINITION) \|\| st.getPredicate().equals(DCTERMS.DESCRIPTION) \|\| st.getPredicate().equals(RDFS.COMMENT)) {	×
99	description = st.getObject().stringValue();	×
100	}
101	if (st.getPredicate().equals(RDF.TYPE) && st.getObject() instanceof IRI objIri) {	×
102	classes.add(objIri);	×
103	}
104	}	×
105	} else {	×
106	nanopubId = null;	×
107	}
108	// if (getDefResp == null \|\| getDefResp.getData().isEmpty()) {
109	// throw new RestartResponseException(ExplorePage.class, parameters);
110	// }
111
112	if (description != null) {	×
113	add(new Label("description", description));	×
114	} else {
115	add(new Label("description").setVisible(false));	×
116	}
117
118	List<NanodashPageRef> breadCrumb;
119	if (resourceWithProfile.getSpace() != null) {	×
120	List<ResourceWithProfile> superSpaces = resourceWithProfile.getSpace().getAllSuperSpacesUntilRoot();	×
121	if (resourceWithProfile instanceof MaintainedResource) {	×
122	superSpaces.add(resourceWithProfile.getSpace());	×
123	}
124	superSpaces.add(resourceWithProfile);	×
125	breadCrumb = new ArrayList<>(superSpaces.stream().map(ss -> new NanodashPageRef(SpacePage.class, new PageParameters().add("id", ss.getId()), ss.getLabel())).toList());	×
126	} else {	×
127	breadCrumb = new ArrayList<>();	×
128	breadCrumb.add(new NanodashPageRef(UserPage.class, new PageParameters().add("id", contextId), resourceWithProfile.getLabel()));	×
129	}
130	breadCrumb.add(new NanodashPageRef(ResourcePartPage.class, new PageParameters().add("id", id).add("context", contextId).add("label", label), label));	×
131	NanodashPageRef[] breadCrumbArray = breadCrumb.toArray(new NanodashPageRef[0]);	×
132	add(new TitleBar("titlebar", this, null,	×
133	breadCrumbArray
134	));
135
136	add(new Label("pagetitle", label + " (resource part) \| nanodash"));	×
137	add(new Label("name", label));	×
138	add(new BookmarkablePageLink<Void>("id", ExplorePage.class, parameters.set("label", label)).setBody(Model.of(id)));	×
139	add(new BookmarkablePageLink<Void>("np", ExplorePage.class, new PageParameters().set("id", nanopubId == null ? id : nanopubId)));	×
140
141	// TODO Improve this code, e.g. make Space a subclass of MaintainedResource or otherwise refactor:
142	// we now use the ProfileResource abstraction, but the code still has to be imprved
143	if (resourceWithProfile != null) {	×
144	final List<AbstractLink> viewButtons = new ArrayList<>();	×
145	AbstractLink addViewButton = new BookmarkablePageLink<NanodashPage>("button", PublishPage.class, new PageParameters()	×
146	.set("template", "https://w3id.org/np/RAPxKWDTDP4neVtRckQcTqKHqCC_GHWWPrs7DESb2BJjo")	×
147	.set("template-version", "latest")	×
148	.set("param_resource", resourceWithProfile.getId())	×
149	.set("context", resourceWithProfile.getId())	×
150	.set("part", id)	×
151	);
152	addViewButton.setBody(Model.of("+ view"));	×
153	viewButtons.add(addViewButton);	×
154
155	final String nanopubRef = nanopubId == null ? "x:" : nanopubId;	×
156	if (resourceWithProfile.isDataInitialized()) {	×
157	add(new ViewList("views", resourceWithProfile, id, nanopubRef, classes));	×
158	add(new ButtonList("view-buttons", resourceWithProfile.getSpace() != null ? resourceWithProfile.getSpace() : resourceWithProfile, null, null, viewButtons));	×
159	} else {
160	add(new AjaxLazyLoadPanel<Component>("views") {	×
161
162	@Override
163	public Component getLazyLoadComponent(String markupId) {
164	return new ViewList(markupId, resourceWithProfile, id, nanopubRef, classes);	×
165	}
166
167	@Override
168	protected boolean isContentReady() {
169	return resourceWithProfile.isDataInitialized();	×
170	}
171
172	});
173	add(new AjaxLazyLoadPanel<Component>("view-buttons") {	×
174
175	@Override
176	public Component getLazyLoadComponent(String markupId) {
177	return new ButtonList(markupId, resourceWithProfile.getSpace() != null ? resourceWithProfile.getSpace() : resourceWithProfile, null, null, viewButtons);	×
178	}
179
180	@Override
181	protected boolean isContentReady() {
182	return resourceWithProfile.isDataInitialized();	×
183	}
184
185	public Component getLoadingComponent(String id) {
186	return new Label(id).setVisible(false);	×
187	}
188
189	});
190	}
191	} else {	×
192	// TODO Ugly code duplication (see above):
193
194	final List<AbstractLink> viewButtons = new ArrayList<>();	×
195	AbstractLink addViewButton = new BookmarkablePageLink<NanodashPage>("button", PublishPage.class, new PageParameters()	×
196	.set("template", "https://w3id.org/np/RAPxKWDTDP4neVtRckQcTqKHqCC_GHWWPrs7DESb2BJjo")	×
197	.set("template-version", "latest")	×
198	.set("param_resource", resourceWithProfile.getSpace().getId())	×
199	.set("context", resourceWithProfile.getSpace().getId())	×
200	.set("part", id)	×
201	);
202	addViewButton.setBody(Model.of("+ view"));	×
203	viewButtons.add(addViewButton);	×
204
205	if (resourceWithProfile.getSpace().isDataInitialized()) {	×
206	add(new ViewList("views", resourceWithProfile.getSpace(), id, nanopubId, classes));	×
207	add(new ButtonList("view-buttons", resourceWithProfile.getSpace(), null, null, viewButtons));	×
208	} else {
209	add(new AjaxLazyLoadPanel<Component>("views") {	×
210
211	@Override
212	public Component getLazyLoadComponent(String markupId) {
213	return new ViewList(markupId, resourceWithProfile.getSpace(), id, nanopubId, classes);	×
214	}
215
216	@Override
217	protected boolean isContentReady() {
218	return resourceWithProfile.getSpace().isDataInitialized();	×
219	}
220
221	});
222	add(new AjaxLazyLoadPanel<Component>("view-buttons") {	×
223
224	@Override
225	public Component getLazyLoadComponent(String markupId) {
226	return new ButtonList(markupId, resourceWithProfile.getSpace(), null, null, viewButtons);	×
227	}
228
229	@Override
230	protected boolean isContentReady() {
231	return resourceWithProfile.getSpace().isDataInitialized();	×
232	}
233
234	public Component getLoadingComponent(String id) {
235	return new Label(id).setVisible(false);	×
236	}
237
238	});
239	}
240	}
241	}	×
242
243	/**
244	* Checks if auto-refresh is enabled for this page.
245	*
246	* @return true if auto-refresh is enabled, false otherwise
247	*/
248	protected boolean hasAutoRefreshEnabled() {
249	return true;	×
250	}
251
252	}

knowledgepixels / nanodash / 21596202545

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