neurospin-deepinsight / brainprep / 20304982320

coverage: 79.341% (-0.1%) from 79.472%
20304982320

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github

AGrigis 
brainprep/cli: update CLI.

0 of 4 new or added lines in 1 file covered. (0.0%)

16 existing lines in 1 file now uncovered.

1444 of 1820 relevant lines covered (79.34%)

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Source File
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0.0
/brainprep/cli.py
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##########################################################################
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# NSAp - Copyright (C) CEA, 2022 - 2025
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# Distributed under the terms of the CeCILL-B license, as published by
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# the CEA-CNRS-INRIA. Refer to the LICENSE file or to
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# http://www.cecill.info/licences/Licence_CeCILL-B_V1-en.html
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# for details.
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##########################################################################
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""" Provide a command line interface.










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"""










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def main():




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    import fire




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    import brainprep.workflow as wf




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    fire.Fire({




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        "subject-level-qa": wf.brainprep_quality_assurance,










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        "group-level-qa": wf.brainprep_group_quality_assurance,










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        "subject-level-defacing": wf.brainprep_defacing,










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        "subject-level-quasiraw": wf.brainprep_quasiraw,










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        "group-level-quasiraw": wf.brainprep_group_quasiraw,










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        "subject-level-brainparc": wf.brainprep_brainparc,










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        "group-level-brainparc": wf.brainprep_group_brainparc,










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        "longitudinal-brainparc": wf.brainprep_longitudinal_brainparc,










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        "subject-level-vbm": wf.brainprep_vbm,










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        "group-level-vbm": wf.brainprep_group_vbm,










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        "longitudinal-vbm": wf.brainprep_longitudinal_vbm,










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        "subject-level-fmriprep": wf.brainprep_fmriprep,










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    #    "tbss-preproc": wf.brainprep_tbss_preproc,










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    #    "tbss": wf.brainprep_tbss,










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        "subject-level-dmriprep": wf.brainprep_dmriprep,










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        "group-level-dmriprep": wf.brainprep_group_dmriprep










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    })
























    

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