20302275428

Committed 17 Dec 2025 12:08PM UTC coverage: 14.405% (+0.004%) from 14.401%

Build # 20302275428

Build Type

push

github

Committed by

tkuhn

Commit Message

fix(ResourcePartPage): Synchronous retrieval of definition

Run Details

546 of 5002 branches covered (10.92%)

Branch coverage included in aggregate %.

1496 of 9174 relevant lines covered (16.31%)

2.13 hits per line

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0.0

src/main/java/com/knowledgepixels/nanodash/page/ResourcePartPage.java

package com.knowledgepixels.nanodash.page;

import java.util.ArrayList;
import java.util.HashSet;
import java.util.List;
import java.util.Set;

import org.apache.wicket.Component;
import org.apache.wicket.extensions.ajax.markup.html.AjaxLazyLoadPanel;
import org.apache.wicket.markup.html.basic.Label;
import org.apache.wicket.markup.html.link.AbstractLink;
import org.apache.wicket.markup.html.link.BookmarkablePageLink;
import org.apache.wicket.model.Model;
import org.apache.wicket.request.mapper.parameter.PageParameters;
import org.eclipse.rdf4j.model.IRI;
import org.eclipse.rdf4j.model.Statement;
import org.eclipse.rdf4j.model.vocabulary.DCTERMS;
import org.eclipse.rdf4j.model.vocabulary.RDF;
import org.eclipse.rdf4j.model.vocabulary.RDFS;
import org.eclipse.rdf4j.model.vocabulary.SKOS;
import org.nanopub.Nanopub;
import org.nanopub.extra.services.ApiResponse;
import org.nanopub.extra.services.QueryRef;

import com.knowledgepixels.nanodash.ApiCache;
import com.knowledgepixels.nanodash.MaintainedResource;
import com.knowledgepixels.nanodash.NanodashPageRef;
import com.knowledgepixels.nanodash.ProfiledResource;
import com.knowledgepixels.nanodash.Space;
import com.knowledgepixels.nanodash.User;
import com.knowledgepixels.nanodash.Utils;
import com.knowledgepixels.nanodash.component.ButtonList;
import com.knowledgepixels.nanodash.component.TitleBar;
import com.knowledgepixels.nanodash.component.ViewList;

/**
 * This class represents a page for a maintained resource.
 */
public class ResourcePartPage extends NanodashPage {

    /**
     * The mount path for this page.
     */
    public static final String MOUNT_PATH = "/part";

    /**
     * {@inheritDoc}
     */
    @Override
    public String getMountPath() {
        return MOUNT_PATH;
    }

    /**
     * Profiled resource (Space or MaintainedResource) object with the data shown on this page.
     */
    private ProfiledResource profiledResource;

    public ResourcePartPage(final PageParameters parameters) {
        super(parameters);

        final String id = parameters.get("id").toString();
        final String contextId = parameters.get("context").toString();
        final String nanopubId;
        String label = id.replaceFirst("^.*[#/]([^#/]+)$", "$1");
        String description = null;
        Set<IRI> classes = new HashSet<>();

        profiledResource = MaintainedResource.get(contextId);
        if (profiledResource == null) {
            if (Space.get(contextId) == null) {
                throw new IllegalArgumentException("Not a resource or space: " + contextId);
            }
            profiledResource = Space.get(contextId);
        }

        QueryRef getDefQuery = new QueryRef("get-term-definitions", "term", id);
        for (IRI userIri : profiledResource.getSpace().getUsers()) {
            for (String pubkey : User.getUserData().getPubkeyhashes(userIri, true)) {
                getDefQuery.getParams().put("pubkey", pubkey);
            }
        }

        ApiResponse getDefResp = ApiCache.retrieveResponseSync(getDefQuery, false);
        if (getDefResp != null && !getDefResp.getData().isEmpty()) {
            nanopubId = getDefResp.getData().iterator().next().get("np");

            Nanopub nanopub = Utils.getAsNanopub(nanopubId);
            for (Statement st : nanopub.getAssertion()) {
                if (!st.getSubject().stringValue().equals(id)) {
                    continue;
                }
                if (st.getPredicate().equals(RDFS.LABEL)) {
                    label = st.getObject().stringValue();
                }
                if (st.getPredicate().equals(SKOS.DEFINITION) || st.getPredicate().equals(DCTERMS.DESCRIPTION) || st.getPredicate().equals(RDFS.COMMENT)) {
                    description = st.getObject().stringValue();
                }
                if (st.getPredicate().equals(RDF.TYPE) && st.getObject() instanceof IRI objIri) {
                    classes.add(objIri);
                }
            }
        } else {
            nanopubId = null;
        }
//        if (getDefResp == null || getDefResp.getData().isEmpty()) {
//            throw new RestartResponseException(ExplorePage.class, parameters);
//        }

        if (description != null) {
            add(new Label("description", description));
        } else {
            add(new Label("description").setVisible(false));
        }

        List<ProfiledResource> superSpaces = profiledResource.getSpace().getAllSuperSpacesUntilRoot();
        if (profiledResource instanceof MaintainedResource) {
            superSpaces.add(profiledResource.getSpace());
        }
        superSpaces.add(profiledResource);
        List<NanodashPageRef> breadCrumb = new ArrayList<>(superSpaces.stream().map(ss -> new NanodashPageRef(SpacePage.class, new PageParameters().add("id", ss.getId()), ss.getLabel())).toList());
        breadCrumb.add(new NanodashPageRef(ResourcePartPage.class, new PageParameters().add("id", id).add("context", contextId).add("label", label), label));
        NanodashPageRef[] breadCrumbArray = breadCrumb.toArray(new NanodashPageRef[0]);
        add(new TitleBar("titlebar", this, null,
                breadCrumbArray
        ));

        add(new Label("pagetitle", label + " (resource part) | nanodash"));
        add(new Label("name", label));
        add(new BookmarkablePageLink<Void>("id", ExplorePage.class, parameters.set("label", label)).setBody(Model.of(id)));
        add(new BookmarkablePageLink<Void>("np", ExplorePage.class, new PageParameters().set("id", nanopubId == null ? id : nanopubId)));

        // TODO Improve this code, e.g. make Space a subclass of MaintainedResource or otherwise refactor:
        // we now use the ProfileResource abstraction, but the code still has to be imprved
        if (profiledResource != null) {
            final List<AbstractLink> viewButtons = new ArrayList<>();
            AbstractLink addViewButton = new BookmarkablePageLink<NanodashPage>("button", PublishPage.class, new PageParameters()
                    .set("template", "https://w3id.org/np/RAPxKWDTDP4neVtRckQcTqKHqCC_GHWWPrs7DESb2BJjo")
                    .set("template-version", "latest")
                    .set("param_resource", profiledResource.getId())
                    .set("context", profiledResource.getId())
            );
            addViewButton.setBody(Model.of("+ view"));
            viewButtons.add(addViewButton);

            final String nanopubRef = nanopubId == null ? "x:" : nanopubId;
            if (profiledResource.isDataInitialized()) {
                add(new ViewList("views", profiledResource, id, nanopubRef, classes));
                add(new ButtonList("view-buttons", profiledResource.getSpace(), null, null, viewButtons));
            } else {
                add(new AjaxLazyLoadPanel<Component>("views") {

                    @Override
                    public Component getLazyLoadComponent(String markupId) {
                        return new ViewList(markupId, profiledResource, id, nanopubRef, classes);
                    }

                    @Override
                    protected boolean isContentReady() {
                        return profiledResource.isDataInitialized();
                    }

                });
                add(new AjaxLazyLoadPanel<Component>("view-buttons") {

                    @Override
                    public Component getLazyLoadComponent(String markupId) {
                        return new ButtonList(markupId, profiledResource.getSpace(), null, null, viewButtons);
                    }

                    @Override
                    protected boolean isContentReady() {
                        return profiledResource.isDataInitialized();
                    }

                    public Component getLoadingComponent(String id) {
                        return new Label(id).setVisible(false);
                    }

                });
            }
        } else {
            // TODO Ugly code duplication (see above):

            final List<AbstractLink> viewButtons = new ArrayList<>();
            AbstractLink addViewButton = new BookmarkablePageLink<NanodashPage>("button", PublishPage.class, new PageParameters()
                    .set("template", "https://w3id.org/np/RAPxKWDTDP4neVtRckQcTqKHqCC_GHWWPrs7DESb2BJjo")
                    .set("template-version", "latest")
                    .set("param_resource", profiledResource.getSpace().getId())
                    .set("context", profiledResource.getSpace().getId())
            );
            addViewButton.setBody(Model.of("+ view"));
            viewButtons.add(addViewButton);

            if (profiledResource.getSpace().isDataInitialized()) {
                add(new ViewList("views", profiledResource.getSpace(), id, nanopubId, classes));
                add(new ButtonList("view-buttons", profiledResource.getSpace(), null, null, viewButtons));
            } else {
                add(new AjaxLazyLoadPanel<Component>("views") {

                    @Override
                    public Component getLazyLoadComponent(String markupId) {
                        return new ViewList(markupId, profiledResource.getSpace(), id, nanopubId, classes);
                    }

                    @Override
                    protected boolean isContentReady() {
                        return profiledResource.getSpace().isDataInitialized();
                    }

                });
                add(new AjaxLazyLoadPanel<Component>("view-buttons") {

                    @Override
                    public Component getLazyLoadComponent(String markupId) {
                        return new ButtonList(markupId, profiledResource.getSpace(), null, null, viewButtons);
                    }

                    @Override
                    protected boolean isContentReady() {
                        return profiledResource.getSpace().isDataInitialized();
                    }

                    public Component getLoadingComponent(String id) {
                        return new Label(id).setVisible(false);
                    }

                });
            }
        }
    }

    /**
     * Checks if auto-refresh is enabled for this page.
     *
     * @return true if auto-refresh is enabled, false otherwise
     */
    protected boolean hasAutoRefreshEnabled() {
        return true;
    }

}

1	package com.knowledgepixels.nanodash.page;
2
3	import java.util.ArrayList;
4	import java.util.HashSet;
5	import java.util.List;
6	import java.util.Set;
7
8	import org.apache.wicket.Component;
9	import org.apache.wicket.extensions.ajax.markup.html.AjaxLazyLoadPanel;
10	import org.apache.wicket.markup.html.basic.Label;
11	import org.apache.wicket.markup.html.link.AbstractLink;
12	import org.apache.wicket.markup.html.link.BookmarkablePageLink;
13	import org.apache.wicket.model.Model;
14	import org.apache.wicket.request.mapper.parameter.PageParameters;
15	import org.eclipse.rdf4j.model.IRI;
16	import org.eclipse.rdf4j.model.Statement;
17	import org.eclipse.rdf4j.model.vocabulary.DCTERMS;
18	import org.eclipse.rdf4j.model.vocabulary.RDF;
19	import org.eclipse.rdf4j.model.vocabulary.RDFS;
20	import org.eclipse.rdf4j.model.vocabulary.SKOS;
21	import org.nanopub.Nanopub;
22	import org.nanopub.extra.services.ApiResponse;
23	import org.nanopub.extra.services.QueryRef;
24
25	import com.knowledgepixels.nanodash.ApiCache;
26	import com.knowledgepixels.nanodash.MaintainedResource;
27	import com.knowledgepixels.nanodash.NanodashPageRef;
28	import com.knowledgepixels.nanodash.ProfiledResource;
29	import com.knowledgepixels.nanodash.Space;
30	import com.knowledgepixels.nanodash.User;
31	import com.knowledgepixels.nanodash.Utils;
32	import com.knowledgepixels.nanodash.component.ButtonList;
33	import com.knowledgepixels.nanodash.component.TitleBar;
34	import com.knowledgepixels.nanodash.component.ViewList;
35
36	/**
37	* This class represents a page for a maintained resource.
38	*/
39	public class ResourcePartPage extends NanodashPage {
40
41	/**
42	* The mount path for this page.
43	*/
44	public static final String MOUNT_PATH = "/part";
45
46	/**
47	* {@inheritDoc}
48	*/
49	@Override
50	public String getMountPath() {
51	return MOUNT_PATH;	×
52	}
53
54	/**
55	* Profiled resource (Space or MaintainedResource) object with the data shown on this page.
56	*/
57	private ProfiledResource profiledResource;
58
59	public ResourcePartPage(final PageParameters parameters) {
60	super(parameters);	×
61
62	final String id = parameters.get("id").toString();	×
63	final String contextId = parameters.get("context").toString();	×
64	final String nanopubId;
65	String label = id.replaceFirst("^.*[#/]([^#/]+)$", "$1");	×
66	String description = null;	×
67	Set<IRI> classes = new HashSet<>();	×
68
69	profiledResource = MaintainedResource.get(contextId);	×
70	if (profiledResource == null) {	×
71	if (Space.get(contextId) == null) {	×
72	throw new IllegalArgumentException("Not a resource or space: " + contextId);	×
73	}
74	profiledResource = Space.get(contextId);	×
75	}
76
77	QueryRef getDefQuery = new QueryRef("get-term-definitions", "term", id);	×
78	for (IRI userIri : profiledResource.getSpace().getUsers()) {	×
79	for (String pubkey : User.getUserData().getPubkeyhashes(userIri, true)) {	×
80	getDefQuery.getParams().put("pubkey", pubkey);	×
81	}	×
82	}	×
83
84	ApiResponse getDefResp = ApiCache.retrieveResponseSync(getDefQuery, false);	×
85	if (getDefResp != null && !getDefResp.getData().isEmpty()) {	×
86	nanopubId = getDefResp.getData().iterator().next().get("np");	×
87
88	Nanopub nanopub = Utils.getAsNanopub(nanopubId);	×
89	for (Statement st : nanopub.getAssertion()) {	×
90	if (!st.getSubject().stringValue().equals(id)) {	×
91	continue;	×
92	}
93	if (st.getPredicate().equals(RDFS.LABEL)) {	×
94	label = st.getObject().stringValue();	×
95	}
96	if (st.getPredicate().equals(SKOS.DEFINITION) \|\| st.getPredicate().equals(DCTERMS.DESCRIPTION) \|\| st.getPredicate().equals(RDFS.COMMENT)) {	×
97	description = st.getObject().stringValue();	×
98	}
99	if (st.getPredicate().equals(RDF.TYPE) && st.getObject() instanceof IRI objIri) {	×
100	classes.add(objIri);	×
101	}
102	}	×
103	} else {	×
104	nanopubId = null;	×
105	}
106	// if (getDefResp == null \|\| getDefResp.getData().isEmpty()) {
107	// throw new RestartResponseException(ExplorePage.class, parameters);
108	// }
109
110	if (description != null) {	×
111	add(new Label("description", description));	×
112	} else {
113	add(new Label("description").setVisible(false));	×
114	}
115
116	List<ProfiledResource> superSpaces = profiledResource.getSpace().getAllSuperSpacesUntilRoot();	×
117	if (profiledResource instanceof MaintainedResource) {	×
118	superSpaces.add(profiledResource.getSpace());	×
119	}
120	superSpaces.add(profiledResource);	×
121	List<NanodashPageRef> breadCrumb = new ArrayList<>(superSpaces.stream().map(ss -> new NanodashPageRef(SpacePage.class, new PageParameters().add("id", ss.getId()), ss.getLabel())).toList());	×
122	breadCrumb.add(new NanodashPageRef(ResourcePartPage.class, new PageParameters().add("id", id).add("context", contextId).add("label", label), label));	×
123	NanodashPageRef[] breadCrumbArray = breadCrumb.toArray(new NanodashPageRef[0]);	×
124	add(new TitleBar("titlebar", this, null,	×
125	breadCrumbArray
126	));
127
128	add(new Label("pagetitle", label + " (resource part) \| nanodash"));	×
129	add(new Label("name", label));	×
130	add(new BookmarkablePageLink<Void>("id", ExplorePage.class, parameters.set("label", label)).setBody(Model.of(id)));	×
131	add(new BookmarkablePageLink<Void>("np", ExplorePage.class, new PageParameters().set("id", nanopubId == null ? id : nanopubId)));	×
132
133	// TODO Improve this code, e.g. make Space a subclass of MaintainedResource or otherwise refactor:
134	// we now use the ProfileResource abstraction, but the code still has to be imprved
135	if (profiledResource != null) {	×
136	final List<AbstractLink> viewButtons = new ArrayList<>();	×
137	AbstractLink addViewButton = new BookmarkablePageLink<NanodashPage>("button", PublishPage.class, new PageParameters()	×
138	.set("template", "https://w3id.org/np/RAPxKWDTDP4neVtRckQcTqKHqCC_GHWWPrs7DESb2BJjo")	×
139	.set("template-version", "latest")	×
140	.set("param_resource", profiledResource.getId())	×
141	.set("context", profiledResource.getId())	×
142	);
143	addViewButton.setBody(Model.of("+ view"));	×
144	viewButtons.add(addViewButton);	×
145
146	final String nanopubRef = nanopubId == null ? "x:" : nanopubId;	×
147	if (profiledResource.isDataInitialized()) {	×
148	add(new ViewList("views", profiledResource, id, nanopubRef, classes));	×
149	add(new ButtonList("view-buttons", profiledResource.getSpace(), null, null, viewButtons));	×
150	} else {
151	add(new AjaxLazyLoadPanel<Component>("views") {	×
152
153	@Override
154	public Component getLazyLoadComponent(String markupId) {
155	return new ViewList(markupId, profiledResource, id, nanopubRef, classes);	×
156	}
157
158	@Override
159	protected boolean isContentReady() {
160	return profiledResource.isDataInitialized();	×
161	}
162
163	});
164	add(new AjaxLazyLoadPanel<Component>("view-buttons") {	×
165
166	@Override
167	public Component getLazyLoadComponent(String markupId) {
168	return new ButtonList(markupId, profiledResource.getSpace(), null, null, viewButtons);	×
169	}
170
171	@Override
172	protected boolean isContentReady() {
173	return profiledResource.isDataInitialized();	×
174	}
175
176	public Component getLoadingComponent(String id) {
177	return new Label(id).setVisible(false);	×
178	}
179
180	});
181	}
182	} else {	×
183	// TODO Ugly code duplication (see above):
184
185	final List<AbstractLink> viewButtons = new ArrayList<>();	×
186	AbstractLink addViewButton = new BookmarkablePageLink<NanodashPage>("button", PublishPage.class, new PageParameters()	×
187	.set("template", "https://w3id.org/np/RAPxKWDTDP4neVtRckQcTqKHqCC_GHWWPrs7DESb2BJjo")	×
188	.set("template-version", "latest")	×
189	.set("param_resource", profiledResource.getSpace().getId())	×
190	.set("context", profiledResource.getSpace().getId())	×
191	);
192	addViewButton.setBody(Model.of("+ view"));	×
193	viewButtons.add(addViewButton);	×
194
195	if (profiledResource.getSpace().isDataInitialized()) {	×
196	add(new ViewList("views", profiledResource.getSpace(), id, nanopubId, classes));	×
197	add(new ButtonList("view-buttons", profiledResource.getSpace(), null, null, viewButtons));	×
198	} else {
199	add(new AjaxLazyLoadPanel<Component>("views") {	×
200
201	@Override
202	public Component getLazyLoadComponent(String markupId) {
203	return new ViewList(markupId, profiledResource.getSpace(), id, nanopubId, classes);	×
204	}
205
206	@Override
207	protected boolean isContentReady() {
208	return profiledResource.getSpace().isDataInitialized();	×
209	}
210
211	});
212	add(new AjaxLazyLoadPanel<Component>("view-buttons") {	×
213
214	@Override
215	public Component getLazyLoadComponent(String markupId) {
216	return new ButtonList(markupId, profiledResource.getSpace(), null, null, viewButtons);	×
217	}
218
219	@Override
220	protected boolean isContentReady() {
221	return profiledResource.getSpace().isDataInitialized();	×
222	}
223
224	public Component getLoadingComponent(String id) {
225	return new Label(id).setVisible(false);	×
226	}
227
228	});
229	}
230	}
231	}	×
232
233	/**
234	* Checks if auto-refresh is enabled for this page.
235	*
236	* @return true if auto-refresh is enabled, false otherwise
237	*/
238	protected boolean hasAutoRefreshEnabled() {
239	return true;	×
240	}
241
242	}

knowledgepixels / nanodash / 20302275428

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