#394

Committed 31 Oct 2025 04:10PM UTC coverage: 57.972% (-1.6%) from 59.538%

Build # #394

Build Type

push

github

Committed by

mr-c

Commit Message

rename package to a namespace that we control

Run Details

7575 of 12994 new or added lines in 261 files covered. (58.3%)

7752 of 13372 relevant lines covered (57.97%)

0.58 hits per line

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59.52

/src/main/java/org/commonwl/cwlsdk/cwl1_2/WorkflowStepOutputImpl.java

// Copyright Common Workflow Language project contributors
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
//      http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.

package org.commonwl.cwlsdk.cwl1_1;

import org.commonwl.cwlsdk.cwl1_1.utils.LoaderInstances;
import org.commonwl.cwlsdk.cwl1_1.utils.LoadingOptions;
import org.commonwl.cwlsdk.cwl1_1.utils.LoadingOptionsBuilder;
import org.commonwl.cwlsdk.cwl1_1.utils.SaveableImpl;
import org.commonwl.cwlsdk.cwl1_1.utils.ValidationException;

/**
* Auto-generated class implementation for <I>https://w3id.org/cwl/cwl#WorkflowStepOutput</I><BR> <BLOCKQUOTE>
 Associate an output parameter of the underlying process with a workflow
 parameter.  The workflow parameter (given in the `id` field) be may be used
 as a `source` to connect with input parameters of other workflow steps, or
 with an output parameter of the process.
 
 A unique identifier for this workflow output parameter.  This is
 the identifier to use in the `source` field of `WorkflowStepInput`
 to connect the output value to downstream parameters.
  </BLOCKQUOTE>
 */
public class WorkflowStepOutputImpl extends SaveableImpl implements WorkflowStepOutput {
  private LoadingOptions loadingOptions_ = new LoadingOptionsBuilder().build();
  private java.util.Map<String, Object> extensionFields_ =
      new java.util.HashMap<String, Object>();
  public LoadingOptions getLoadingOptions() {
    return this.loadingOptions_;
  }
  public java.util.Map<String, Object> getExtensionFields() {
    return this.extensionFields_;
  }

  private java.util.Optional<String> id;

  /**
   * Getter for property <I>https://w3id.org/cwl/cwl#Identified/id</I><BR>
   * <BLOCKQUOTE>
   * The unique identifier for this object.   * </BLOCKQUOTE>
   */

  public java.util.Optional<String> getId() {
    return this.id;
  }

  /**
   * Used by {@link org.commonwl.cwlsdk.cwl1_1.utils.RootLoader} to construct instances of WorkflowStepOutputImpl.
   *
   * @param __doc_            Document fragment to load this record object from (presumably a
                              {@link java.util.Map}).
   * @param __baseUri_        Base URI to generate child document IDs against.
   * @param __loadingOptions  Context for loading URIs and populating objects.
   * @param __docRoot_        ID at this position in the document (if available) (maybe?)
   * @throws ValidationException If the document fragment is not a {@link java.util.Map}
   *                             or validation of fields fails.
   */
  public WorkflowStepOutputImpl(
      final Object __doc_,
      final String __baseUri_,
      LoadingOptions __loadingOptions,
      final String __docRoot_) {
    super(__doc_, __baseUri_, __loadingOptions, __docRoot_);
    // Prefix plumbing variables with '__' to reduce likelihood of collision with
    // generated names.
    String __baseUri = __baseUri_;
    String __docRoot = __docRoot_;
    if (!(__doc_ instanceof java.util.Map)) {
      throw new ValidationException("WorkflowStepOutputImpl called on non-map");
    }
    final java.util.Map<String, Object> __doc = (java.util.Map<String, Object>) __doc_;
    final java.util.List<ValidationException> __errors =
        new java.util.ArrayList<ValidationException>();
    if (__loadingOptions != null) {
      this.loadingOptions_ = __loadingOptions;
    }
    java.util.Optional<String> id;

    if (__doc.containsKey("id")) {
      try {
        id =
            LoaderInstances
                .uri_optional_StringInstance_True_False_None_None
                .loadField(__doc.get("id"), __baseUri, __loadingOptions);
      } catch (ValidationException e) {
        id = null; // won't be used but prevents compiler from complaining.
        final String __message = "the `id` field is not valid because:";
        __errors.add(new ValidationException(__message, e));
      }

    } else {
      id = null;
    }

    Boolean __original_is_null = id == null;
    if (id == null) {
      if (__docRoot != null) {
        id = java.util.Optional.of(__docRoot);
      } else {
        id = java.util.Optional.of("_:" + java.util.UUID.randomUUID().toString());
      }
    }
    if (__original_is_null) {
        __baseUri = __baseUri_;
    } else {
        __baseUri = (String) id.orElse(null);
    }
    if (!__errors.isEmpty()) {
      throw new ValidationException("Trying 'RecordField'", __errors);
    }
    this.id = (java.util.Optional<String>) id;
    for (String field:__doc.keySet()) {
      if (!attrs.contains(field)) {
        if (field.contains(":")) {
          String expanded_field = __loadingOptions.expandUrl(field, "", false, false, null);
          extensionFields_.put(expanded_field, __doc.get(field));
        }
      }
    }
  }
  private java.util.List<String> attrs = java.util.Arrays.asList("id");
}

1	// Copyright Common Workflow Language project contributors
2	//
3	// Licensed under the Apache License, Version 2.0 (the "License");
4	// you may not use this file except in compliance with the License.
5	// You may obtain a copy of the License at
6	//
7	// http://www.apache.org/licenses/LICENSE-2.0
8	//
9	// Unless required by applicable law or agreed to in writing, software
10	// distributed under the License is distributed on an "AS IS" BASIS,
11	// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12	// See the License for the specific language governing permissions and
13	// limitations under the License.
14
15	package org.commonwl.cwlsdk.cwl1_1;
16
17	import org.commonwl.cwlsdk.cwl1_1.utils.LoaderInstances;
18	import org.commonwl.cwlsdk.cwl1_1.utils.LoadingOptions;
19	import org.commonwl.cwlsdk.cwl1_1.utils.LoadingOptionsBuilder;
20	import org.commonwl.cwlsdk.cwl1_1.utils.SaveableImpl;
21	import org.commonwl.cwlsdk.cwl1_1.utils.ValidationException;
22
23	/**
24	* Auto-generated class implementation for <I>https://w3id.org/cwl/cwl#WorkflowStepOutput</I><BR> <BLOCKQUOTE>
25	Associate an output parameter of the underlying process with a workflow
26	parameter. The workflow parameter (given in the `id` field) be may be used
27	as a `source` to connect with input parameters of other workflow steps, or
28	with an output parameter of the process.
29
30	A unique identifier for this workflow output parameter. This is
31	the identifier to use in the `source` field of `WorkflowStepInput`
32	to connect the output value to downstream parameters.
33	</BLOCKQUOTE>
34	*/
35	public class WorkflowStepOutputImpl extends SaveableImpl implements WorkflowStepOutput {
36	private LoadingOptions loadingOptions_ = new LoadingOptionsBuilder().build();	1✔
37	private java.util.Map<String, Object> extensionFields_ =	1✔
38	new java.util.HashMap<String, Object>();
39	public LoadingOptions getLoadingOptions() {
NEW 40	return this.loadingOptions_;	×
41	}
42	public java.util.Map<String, Object> getExtensionFields() {
NEW 43	return this.extensionFields_;	×
44	}
45
46	private java.util.Optional<String> id;
47
48	/**
49	* Getter for property <I>https://w3id.org/cwl/cwl#Identified/id</I><BR>
50	* <BLOCKQUOTE>
51	* The unique identifier for this object. * </BLOCKQUOTE>
52	*/
53
54	public java.util.Optional<String> getId() {
NEW 55	return this.id;	×
56	}
57
58	/**
59	* Used by {@link org.commonwl.cwlsdk.cwl1_1.utils.RootLoader} to construct instances of WorkflowStepOutputImpl.
60	*
61	* @param __doc_ Document fragment to load this record object from (presumably a
62	{@link java.util.Map}).
63	* @param __baseUri_ Base URI to generate child document IDs against.
64	* @param __loadingOptions Context for loading URIs and populating objects.
65	* @param __docRoot_ ID at this position in the document (if available) (maybe?)
66	* @throws ValidationException If the document fragment is not a {@link java.util.Map}
67	* or validation of fields fails.
68	*/
69	public WorkflowStepOutputImpl(
70	final Object __doc_,
71	final String __baseUri_,
72	LoadingOptions __loadingOptions,
73	final String __docRoot_) {
74	super(__doc_, __baseUri_, __loadingOptions, __docRoot_);	1✔
75	// Prefix plumbing variables with '__' to reduce likelihood of collision with
76	// generated names.
77	String __baseUri = __baseUri_;	1✔
78	String __docRoot = __docRoot_;	1✔
79	if (!(__doc_ instanceof java.util.Map)) {	1✔
NEW 80	throw new ValidationException("WorkflowStepOutputImpl called on non-map");	×
81	}
82	final java.util.Map<String, Object> __doc = (java.util.Map<String, Object>) __doc_;	1✔
83	final java.util.List<ValidationException> __errors =	1✔
84	new java.util.ArrayList<ValidationException>();
85	if (__loadingOptions != null) {	1✔
86	this.loadingOptions_ = __loadingOptions;	1✔
87	}
88	java.util.Optional<String> id;
89
90	if (__doc.containsKey("id")) {	1✔
91	try {
92	id =	1✔
93	LoaderInstances
94	.uri_optional_StringInstance_True_False_None_None
95	.loadField(__doc.get("id"), __baseUri, __loadingOptions);	1✔
NEW 96	} catch (ValidationException e) {	×
NEW 97	id = null; // won't be used but prevents compiler from complaining.	×
NEW 98	final String __message = "the `id` field is not valid because:";	×
NEW 99	__errors.add(new ValidationException(__message, e));	×
100	}	1✔
101
102	} else {
NEW 103	id = null;	×
104	}
105
106	Boolean __original_is_null = id == null;	1✔
107	if (id == null) {	1✔
NEW 108	if (__docRoot != null) {	×
NEW 109	id = java.util.Optional.of(__docRoot);	×
110	} else {
NEW 111	id = java.util.Optional.of("_:" + java.util.UUID.randomUUID().toString());	×
112	}
113	}
114	if (__original_is_null) {	1✔
NEW 115	__baseUri = __baseUri_;	×
116	} else {
117	__baseUri = (String) id.orElse(null);	1✔
118	}
119	if (!__errors.isEmpty()) {	1✔
NEW 120	throw new ValidationException("Trying 'RecordField'", __errors);	×
121	}
122	this.id = (java.util.Optional<String>) id;	1✔
123	for (String field:__doc.keySet()) {	1✔
124	if (!attrs.contains(field)) {	1✔
NEW 125	if (field.contains(":")) {	×
NEW 126	String expanded_field = __loadingOptions.expandUrl(field, "", false, false, null);	×
NEW 127	extensionFields_.put(expanded_field, __doc.get(field));	×
128	}
129	}
130	}	1✔
131	}	1✔
132	private java.util.List<String> attrs = java.util.Arrays.asList("id");	1✔
133	}

common-workflow-language / cwljava / #394

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