#394

Committed 31 Oct 2025 04:10PM UTC coverage: 57.972% (-1.6%) from 59.538%

Build # #394

Build Type

push

github

Committed by

mr-c

Commit Message

rename package to a namespace that we control

Coverage Stats

7575 of 12994 new or added lines in 261 files covered. (58.3%)

7752 of 13372 relevant lines covered (57.97%)

0.58 hits per line

Source File
Press 'n' to go to next uncovered line, 'b' for previous

44.34

/src/main/java/org/commonwl/cwlsdk/cwl1_2/OperationOutputParameterImpl.java

// Copyright Common Workflow Language project contributors
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
//      http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.

package org.commonwl.cwlsdk.cwl1_2;

import org.commonwl.cwlsdk.cwl1_2.utils.LoaderInstances;
import org.commonwl.cwlsdk.cwl1_2.utils.LoadingOptions;
import org.commonwl.cwlsdk.cwl1_2.utils.LoadingOptionsBuilder;
import org.commonwl.cwlsdk.cwl1_2.utils.SaveableImpl;
import org.commonwl.cwlsdk.cwl1_2.utils.ValidationException;

/**
* Auto-generated class implementation for <I>https://w3id.org/cwl/cwl#OperationOutputParameter</I><BR> <BLOCKQUOTE>
 Describe an output parameter of an operation.
  </BLOCKQUOTE>
 */
public class OperationOutputParameterImpl extends SaveableImpl implements OperationOutputParameter {
  private LoadingOptions loadingOptions_ = new LoadingOptionsBuilder().build();
  private java.util.Map<String, Object> extensionFields_ =
      new java.util.HashMap<String, Object>();
  public LoadingOptions getLoadingOptions() {
    return this.loadingOptions_;
  }
  public java.util.Map<String, Object> getExtensionFields() {
    return this.extensionFields_;
  }

  private java.util.Optional<String> id;

  /**
   * Getter for property <I>https://w3id.org/cwl/cwl#Identified/id</I><BR>
   * <BLOCKQUOTE>
   * The unique identifier for this object.   * </BLOCKQUOTE>
   */

  public java.util.Optional<String> getId() {
    return this.id;
  }

  private java.util.Optional<String> label;

  /**
   * Getter for property <I>https://w3id.org/cwl/cwl#Labeled/label</I><BR>
   * <BLOCKQUOTE>
   * A short, human-readable label of this object.   * </BLOCKQUOTE>
   */

  public java.util.Optional<String> getLabel() {
    return this.label;
  }

  private Object secondaryFiles;

  /**
   * Getter for property <I>https://w3id.org/cwl/cwl#secondaryFiles</I><BR>
   * <BLOCKQUOTE>
   * Only valid when `type: File` or is an array of `items: File`.
   * 
   * Provides a pattern or expression specifying files or
   * directories that should be included alongside the primary
   * file.  Secondary files may be required or optional.  When not
   * explicitly specified, secondary files specified for `inputs`
   * are required and `outputs` are optional.  An implementation
   * must include matching Files and Directories in the
   * `secondaryFiles` property of the primary file.  These Files
   * and Directories must be transferred and staged alongside the
   * primary file.  An implementation may fail workflow execution
   * if a required secondary file does not exist.
   * 
   * If the value is an expression, the value of `self` in the expression
   * must be the primary input or output File object to which this binding
   * applies.  The `basename`, `nameroot` and `nameext` fields must be
   * present in `self`.  For `CommandLineTool` outputs the `path` field must
   * also be present.  The expression must return a filename string relative
   * to the path to the primary File, a File or Directory object with either
   * `path` or `location` and `basename` fields set, or an array consisting
   * of strings or File or Directory objects.  It is legal to reference an
   * unchanged File or Directory object taken from input as a secondaryFile.
   * The expression may return "null" in which case there is no secondaryFile
   * from that expression.
   * 
   * To work on non-filename-preserving storage systems, portable tool
   * descriptions should avoid constructing new values from `location`, but
   * should construct relative references using `basename` or `nameroot`
   * instead.
   * 
   * If a value in `secondaryFiles` is a string that is not an expression,
   * it specifies that the following pattern should be applied to the path
   * of the primary file to yield a filename relative to the primary File:
   * 
   *   1. If string ends with `?` character, remove the last `?` and mark
   *     the resulting secondary file as optional.
   *   2. If string begins with one or more caret `^` characters, for each
   *     caret, remove the last file extension from the path (the last
   *     period `.` and all following characters).  If there are no file
   *     extensions, the path is unchanged.
   *   3. Append the remainder of the string to the end of the file path.
   *    * </BLOCKQUOTE>
   */

  public Object getSecondaryFiles() {
    return this.secondaryFiles;
  }

  private java.util.Optional<Boolean> streamable;

  /**
   * Getter for property <I>https://w3id.org/cwl/cwl#FieldBase/streamable</I><BR>
   * <BLOCKQUOTE>
   * Only valid when `type: File` or is an array of `items: File`.
   * 
   * A value of `true` indicates that the file is read or written
   * sequentially without seeking.  An implementation may use this flag to
   * indicate whether it is valid to stream file contents using a named
   * pipe.  Default: `false`.
   *    * </BLOCKQUOTE>
   */

  public java.util.Optional<Boolean> getStreamable() {
    return this.streamable;
  }

  private Object doc;

  /**
   * Getter for property <I>https://w3id.org/cwl/salad#Documented/doc</I><BR>
   * <BLOCKQUOTE>
   * A documentation string for this object, or an array of strings which should be concatenated.   * </BLOCKQUOTE>
   */

  public Object getDoc() {
    return this.doc;
  }

  private Object format;

  /**
   * Getter for property <I>https://w3id.org/cwl/cwl#format</I><BR>
   * <BLOCKQUOTE>
   * Only valid when `type: File` or is an array of `items: File`.
   * 
   * This is the file format that will be assigned to the output
   * File object.
   *    * </BLOCKQUOTE>
   */

  public Object getFormat() {
    return this.format;
  }

  private Object type;

  /**
   * Getter for property <I>https://w3id.org/cwl/salad#type</I><BR>
   * <BLOCKQUOTE>
   * Specify valid types of data that may be assigned to this parameter.
   *    * </BLOCKQUOTE>
   */

  public Object getType() {
    return this.type;
  }

  /**
   * Used by {@link org.commonwl.cwlsdk.cwl1_2.utils.RootLoader} to construct instances of OperationOutputParameterImpl.
   *
   * @param __doc_            Document fragment to load this record object from (presumably a
                              {@link java.util.Map}).
   * @param __baseUri_        Base URI to generate child document IDs against.
   * @param __loadingOptions  Context for loading URIs and populating objects.
   * @param __docRoot_        ID at this position in the document (if available) (maybe?)
   * @throws ValidationException If the document fragment is not a {@link java.util.Map}
   *                             or validation of fields fails.
   */
  public OperationOutputParameterImpl(
      final Object __doc_,
      final String __baseUri_,
      LoadingOptions __loadingOptions,
      final String __docRoot_) {
    super(__doc_, __baseUri_, __loadingOptions, __docRoot_);
    // Prefix plumbing variables with '__' to reduce likelihood of collision with
    // generated names.
    String __baseUri = __baseUri_;
    String __docRoot = __docRoot_;
    if (!(__doc_ instanceof java.util.Map)) {
      throw new ValidationException("OperationOutputParameterImpl called on non-map");
    }
    final java.util.Map<String, Object> __doc = (java.util.Map<String, Object>) __doc_;
    final java.util.List<ValidationException> __errors =
        new java.util.ArrayList<ValidationException>();
    if (__loadingOptions != null) {
      this.loadingOptions_ = __loadingOptions;
    }
    java.util.Optional<String> id;

    if (__doc.containsKey("id")) {
      try {
        id =
            LoaderInstances
                .uri_optional_StringInstance_True_False_None_None
                .loadField(__doc.get("id"), __baseUri, __loadingOptions);
      } catch (ValidationException e) {
        id = null; // won't be used but prevents compiler from complaining.
        final String __message = "the `id` field is not valid because:";
        __errors.add(new ValidationException(__message, e));
      }

    } else {
      id = null;
    }

    Boolean __original_is_null = id == null;
    if (id == null) {
      if (__docRoot != null) {
        id = java.util.Optional.of(__docRoot);
      } else {
        id = java.util.Optional.of("_:" + java.util.UUID.randomUUID().toString());
      }
    }
    if (__original_is_null) {
        __baseUri = __baseUri_;
    } else {
        __baseUri = (String) id.orElse(null);
    }
    java.util.Optional<String> label;

    if (__doc.containsKey("label")) {
      try {
        label =
            LoaderInstances
                .optional_StringInstance
                .loadField(__doc.get("label"), __baseUri, __loadingOptions);
      } catch (ValidationException e) {
        label = null; // won't be used but prevents compiler from complaining.
        final String __message = "the `label` field is not valid because:";
        __errors.add(new ValidationException(__message, e));
      }

    } else {
      label = null;
    }
    Object secondaryFiles;

    if (__doc.containsKey("secondaryFiles")) {
      try {
        secondaryFiles =
            LoaderInstances
                .secondaryfilesdsl_union_of_NullInstance_or_SecondaryFileSchema_or_array_of_SecondaryFileSchema
                .loadField(__doc.get("secondaryFiles"), __baseUri, __loadingOptions);
      } catch (ValidationException e) {
        secondaryFiles = null; // won't be used but prevents compiler from complaining.
        final String __message = "the `secondaryFiles` field is not valid because:";
        __errors.add(new ValidationException(__message, e));
      }

    } else {
      secondaryFiles = null;
    }
    java.util.Optional<Boolean> streamable;

    if (__doc.containsKey("streamable")) {
      try {
        streamable =
            LoaderInstances
                .optional_BooleanInstance
                .loadField(__doc.get("streamable"), __baseUri, __loadingOptions);
      } catch (ValidationException e) {
        streamable = null; // won't be used but prevents compiler from complaining.
        final String __message = "the `streamable` field is not valid because:";
        __errors.add(new ValidationException(__message, e));
      }

    } else {
      streamable = null;
    }
    Object doc;

    if (__doc.containsKey("doc")) {
      try {
        doc =
            LoaderInstances
                .union_of_NullInstance_or_StringInstance_or_array_of_StringInstance
                .loadField(__doc.get("doc"), __baseUri, __loadingOptions);
      } catch (ValidationException e) {
        doc = null; // won't be used but prevents compiler from complaining.
        final String __message = "the `doc` field is not valid because:";
        __errors.add(new ValidationException(__message, e));
      }

    } else {
      doc = null;
    }
    Object format;

    if (__doc.containsKey("format")) {
      try {
        format =
            LoaderInstances
                .uri_union_of_NullInstance_or_StringInstance_or_ExpressionLoader_True_False_None_True
                .loadField(__doc.get("format"), __baseUri, __loadingOptions);
      } catch (ValidationException e) {
        format = null; // won't be used but prevents compiler from complaining.
        final String __message = "the `format` field is not valid because:";
        __errors.add(new ValidationException(__message, e));
      }

    } else {
      format = null;
    }
    Object type;
    try {
      type =
          LoaderInstances
              .typedsl_union_of_CWLType_or_OutputRecordSchema_or_OutputEnumSchema_or_OutputArraySchema_or_StringInstance_or_array_of_union_of_CWLType_or_OutputRecordSchema_or_OutputEnumSchema_or_OutputArraySchema_or_StringInstance_2
              .loadField(__doc.get("type"), __baseUri, __loadingOptions);
    } catch (ValidationException e) {
      type = null; // won't be used but prevents compiler from complaining.
      final String __message = "the `type` field is not valid because:";
      __errors.add(new ValidationException(__message, e));
    }
    if (!__errors.isEmpty()) {
      throw new ValidationException("Trying 'RecordField'", __errors);
    }
    this.label = (java.util.Optional<String>) label;
    this.secondaryFiles = (Object) secondaryFiles;
    this.streamable = (java.util.Optional<Boolean>) streamable;
    this.doc = (Object) doc;
    this.id = (java.util.Optional<String>) id;
    this.format = (Object) format;
    this.type = (Object) type;
    for (String field:__doc.keySet()) {
      if (!attrs.contains(field)) {
        if (field.contains(":")) {
          String expanded_field = __loadingOptions.expandUrl(field, "", false, false, null);
          extensionFields_.put(expanded_field, __doc.get(field));
        }
      }
    }
  }
  private java.util.List<String> attrs = java.util.Arrays.asList("label", "secondaryFiles", "streamable", "doc", "id", "format", "type");
}

1	// Copyright Common Workflow Language project contributors
2	//
3	// Licensed under the Apache License, Version 2.0 (the "License");
4	// you may not use this file except in compliance with the License.
5	// You may obtain a copy of the License at
6	//
7	// http://www.apache.org/licenses/LICENSE-2.0
8	//
9	// Unless required by applicable law or agreed to in writing, software
10	// distributed under the License is distributed on an "AS IS" BASIS,
11	// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12	// See the License for the specific language governing permissions and
13	// limitations under the License.
14
15	package org.commonwl.cwlsdk.cwl1_2;
16
17	import org.commonwl.cwlsdk.cwl1_2.utils.LoaderInstances;
18	import org.commonwl.cwlsdk.cwl1_2.utils.LoadingOptions;
19	import org.commonwl.cwlsdk.cwl1_2.utils.LoadingOptionsBuilder;
20	import org.commonwl.cwlsdk.cwl1_2.utils.SaveableImpl;
21	import org.commonwl.cwlsdk.cwl1_2.utils.ValidationException;
22
23	/**
24	* Auto-generated class implementation for <I>https://w3id.org/cwl/cwl#OperationOutputParameter</I><BR> <BLOCKQUOTE>
25	Describe an output parameter of an operation.
26	</BLOCKQUOTE>
27	*/
28	public class OperationOutputParameterImpl extends SaveableImpl implements OperationOutputParameter {
29	private LoadingOptions loadingOptions_ = new LoadingOptionsBuilder().build();	1✔
30	private java.util.Map<String, Object> extensionFields_ =	1✔
31	new java.util.HashMap<String, Object>();
32	public LoadingOptions getLoadingOptions() {
NEW 33	return this.loadingOptions_;	×
34	}
35	public java.util.Map<String, Object> getExtensionFields() {
36	return this.extensionFields_;	×
37	}
38
39	private java.util.Optional<String> id;
40
41	/**
42	* Getter for property <I>https://w3id.org/cwl/cwl#Identified/id</I><BR>
43	* <BLOCKQUOTE>
44	* The unique identifier for this object. * </BLOCKQUOTE>
45	*/
46
47	public java.util.Optional<String> getId() {
48	return this.id;	×
49	}
50
51	private java.util.Optional<String> label;
52
53	/**
54	* Getter for property <I>https://w3id.org/cwl/cwl#Labeled/label</I><BR>
55	* <BLOCKQUOTE>
56	* A short, human-readable label of this object. * </BLOCKQUOTE>
57	*/
58
59	public java.util.Optional<String> getLabel() {
60	return this.label;	×
61	}
62
63	private Object secondaryFiles;
64
65	/**
66	* Getter for property <I>https://w3id.org/cwl/cwl#secondaryFiles</I><BR>
67	* <BLOCKQUOTE>
68	* Only valid when `type: File` or is an array of `items: File`.
69	*
70	* Provides a pattern or expression specifying files or
71	* directories that should be included alongside the primary
72	* file. Secondary files may be required or optional. When not
73	* explicitly specified, secondary files specified for `inputs`
74	* are required and `outputs` are optional. An implementation
75	* must include matching Files and Directories in the
76	* `secondaryFiles` property of the primary file. These Files
77	* and Directories must be transferred and staged alongside the
78	* primary file. An implementation may fail workflow execution
79	* if a required secondary file does not exist.
80	*
81	* If the value is an expression, the value of `self` in the expression
82	* must be the primary input or output File object to which this binding
83	* applies. The `basename`, `nameroot` and `nameext` fields must be
84	* present in `self`. For `CommandLineTool` outputs the `path` field must
85	* also be present. The expression must return a filename string relative
86	* to the path to the primary File, a File or Directory object with either
87	* `path` or `location` and `basename` fields set, or an array consisting
88	* of strings or File or Directory objects. It is legal to reference an
89	* unchanged File or Directory object taken from input as a secondaryFile.
90	* The expression may return "null" in which case there is no secondaryFile
91	* from that expression.
92	*
93	* To work on non-filename-preserving storage systems, portable tool
94	* descriptions should avoid constructing new values from `location`, but
95	* should construct relative references using `basename` or `nameroot`
96	* instead.
97	*
98	* If a value in `secondaryFiles` is a string that is not an expression,
99	* it specifies that the following pattern should be applied to the path
100	* of the primary file to yield a filename relative to the primary File:
101	*
102	* 1. If string ends with `?` character, remove the last `?` and mark
103	* the resulting secondary file as optional.
104	* 2. If string begins with one or more caret `^` characters, for each
105	* caret, remove the last file extension from the path (the last
106	* period `.` and all following characters). If there are no file
107	* extensions, the path is unchanged.
108	* 3. Append the remainder of the string to the end of the file path.
109	* * </BLOCKQUOTE>
110	*/
111
112	public Object getSecondaryFiles() {
113	return this.secondaryFiles;	×
114	}
115
116	private java.util.Optional<Boolean> streamable;
117
118	/**
119	* Getter for property <I>https://w3id.org/cwl/cwl#FieldBase/streamable</I><BR>
120	* <BLOCKQUOTE>
121	* Only valid when `type: File` or is an array of `items: File`.
122	*
123	* A value of `true` indicates that the file is read or written
124	* sequentially without seeking. An implementation may use this flag to
125	* indicate whether it is valid to stream file contents using a named
126	* pipe. Default: `false`.
127	* * </BLOCKQUOTE>
128	*/
129
130	public java.util.Optional<Boolean> getStreamable() {
131	return this.streamable;	×
132	}
133
134	private Object doc;
135
136	/**
137	* Getter for property <I>https://w3id.org/cwl/salad#Documented/doc</I><BR>
138	* <BLOCKQUOTE>
139	* A documentation string for this object, or an array of strings which should be concatenated. * </BLOCKQUOTE>
140	*/
141
142	public Object getDoc() {
143	return this.doc;	×
144	}
145
146	private Object format;
147
148	/**
149	* Getter for property <I>https://w3id.org/cwl/cwl#format</I><BR>
150	* <BLOCKQUOTE>
151	* Only valid when `type: File` or is an array of `items: File`.
152	*
153	* This is the file format that will be assigned to the output
154	* File object.
155	* * </BLOCKQUOTE>
156	*/
157
158	public Object getFormat() {
159	return this.format;	×
160	}
161
162	private Object type;
163
164	/**
165	* Getter for property <I>https://w3id.org/cwl/salad#type</I><BR>
166	* <BLOCKQUOTE>
167	* Specify valid types of data that may be assigned to this parameter.
168	* * </BLOCKQUOTE>
169	*/
170
171	public Object getType() {
172	return this.type;	×
173	}
174
175	/**
176	* Used by {@link org.commonwl.cwlsdk.cwl1_2.utils.RootLoader} to construct instances of OperationOutputParameterImpl.
177	*
178	* @param __doc_ Document fragment to load this record object from (presumably a
179	{@link java.util.Map}).
180	* @param __baseUri_ Base URI to generate child document IDs against.
181	* @param __loadingOptions Context for loading URIs and populating objects.
182	* @param __docRoot_ ID at this position in the document (if available) (maybe?)
183	* @throws ValidationException If the document fragment is not a {@link java.util.Map}
184	* or validation of fields fails.
185	*/
186	public OperationOutputParameterImpl(
187	final Object __doc_,
188	final String __baseUri_,
189	LoadingOptions __loadingOptions,
190	final String __docRoot_) {
191	super(__doc_, __baseUri_, __loadingOptions, __docRoot_);	1✔
192	// Prefix plumbing variables with '__' to reduce likelihood of collision with
193	// generated names.
194	String __baseUri = __baseUri_;	1✔
195	String __docRoot = __docRoot_;	1✔
196	if (!(__doc_ instanceof java.util.Map)) {	1✔
197	throw new ValidationException("OperationOutputParameterImpl called on non-map");	×
198	}
199	final java.util.Map<String, Object> __doc = (java.util.Map<String, Object>) __doc_;	1✔
200	final java.util.List<ValidationException> __errors =	1✔
201	new java.util.ArrayList<ValidationException>();
202	if (__loadingOptions != null) {	1✔
203	this.loadingOptions_ = __loadingOptions;	1✔
204	}
205	java.util.Optional<String> id;
206
207	if (__doc.containsKey("id")) {	1✔
208	try {
209	id =	1✔
210	LoaderInstances
211	.uri_optional_StringInstance_True_False_None_None
212	.loadField(__doc.get("id"), __baseUri, __loadingOptions);	1✔
213	} catch (ValidationException e) {	×
214	id = null; // won't be used but prevents compiler from complaining.	×
215	final String __message = "the `id` field is not valid because:";	×
216	__errors.add(new ValidationException(__message, e));	×
217	}	1✔
218
219	} else {
220	id = null;	×
221	}
222
223	Boolean __original_is_null = id == null;	1✔
224	if (id == null) {	1✔
225	if (__docRoot != null) {	×
226	id = java.util.Optional.of(__docRoot);	×
227	} else {
228	id = java.util.Optional.of("_:" + java.util.UUID.randomUUID().toString());	×
229	}
230	}
231	if (__original_is_null) {	1✔
232	__baseUri = __baseUri_;	×
233	} else {
234	__baseUri = (String) id.orElse(null);	1✔
235	}
236	java.util.Optional<String> label;
237
238	if (__doc.containsKey("label")) {	1✔
239	try {
240	label =	×
241	LoaderInstances
242	.optional_StringInstance
243	.loadField(__doc.get("label"), __baseUri, __loadingOptions);	×
244	} catch (ValidationException e) {	×
245	label = null; // won't be used but prevents compiler from complaining.	×
246	final String __message = "the `label` field is not valid because:";	×
247	__errors.add(new ValidationException(__message, e));	×
248	}	×
249
250	} else {
251	label = null;	1✔
252	}
253	Object secondaryFiles;
254
255	if (__doc.containsKey("secondaryFiles")) {	1✔
256	try {
257	secondaryFiles =	×
258	LoaderInstances
259	.secondaryfilesdsl_union_of_NullInstance_or_SecondaryFileSchema_or_array_of_SecondaryFileSchema
260	.loadField(__doc.get("secondaryFiles"), __baseUri, __loadingOptions);	×
261	} catch (ValidationException e) {	×
262	secondaryFiles = null; // won't be used but prevents compiler from complaining.	×
263	final String __message = "the `secondaryFiles` field is not valid because:";	×
264	__errors.add(new ValidationException(__message, e));	×
265	}	×
266
267	} else {
268	secondaryFiles = null;	1✔
269	}
270	java.util.Optional<Boolean> streamable;
271
272	if (__doc.containsKey("streamable")) {	1✔
273	try {
274	streamable =	×
275	LoaderInstances
276	.optional_BooleanInstance
277	.loadField(__doc.get("streamable"), __baseUri, __loadingOptions);	×
278	} catch (ValidationException e) {	×
279	streamable = null; // won't be used but prevents compiler from complaining.	×
280	final String __message = "the `streamable` field is not valid because:";	×
281	__errors.add(new ValidationException(__message, e));	×
282	}	×
283
284	} else {
285	streamable = null;	1✔
286	}
287	Object doc;
288
289	if (__doc.containsKey("doc")) {	1✔
290	try {
291	doc =	1✔
292	LoaderInstances
293	.union_of_NullInstance_or_StringInstance_or_array_of_StringInstance
294	.loadField(__doc.get("doc"), __baseUri, __loadingOptions);	1✔
295	} catch (ValidationException e) {	×
296	doc = null; // won't be used but prevents compiler from complaining.	×
297	final String __message = "the `doc` field is not valid because:";	×
298	__errors.add(new ValidationException(__message, e));	×
299	}	1✔
300
301	} else {
302	doc = null;	1✔
303	}
304	Object format;
305
306	if (__doc.containsKey("format")) {	1✔
307	try {
308	format =	×
309	LoaderInstances
310	.uri_union_of_NullInstance_or_StringInstance_or_ExpressionLoader_True_False_None_True
311	.loadField(__doc.get("format"), __baseUri, __loadingOptions);	×
312	} catch (ValidationException e) {	×
313	format = null; // won't be used but prevents compiler from complaining.	×
314	final String __message = "the `format` field is not valid because:";	×
315	__errors.add(new ValidationException(__message, e));	×
316	}	×
317
318	} else {
319	format = null;	1✔
320	}
321	Object type;
322	try {
323	type =	1✔
324	LoaderInstances
325	.typedsl_union_of_CWLType_or_OutputRecordSchema_or_OutputEnumSchema_or_OutputArraySchema_or_StringInstance_or_array_of_union_of_CWLType_or_OutputRecordSchema_or_OutputEnumSchema_or_OutputArraySchema_or_StringInstance_2
326	.loadField(__doc.get("type"), __baseUri, __loadingOptions);	1✔
327	} catch (ValidationException e) {	×
328	type = null; // won't be used but prevents compiler from complaining.	×
329	final String __message = "the `type` field is not valid because:";	×
330	__errors.add(new ValidationException(__message, e));	×
331	}	1✔
332	if (!__errors.isEmpty()) {	1✔
333	throw new ValidationException("Trying 'RecordField'", __errors);	×
334	}
335	this.label = (java.util.Optional<String>) label;	1✔
336	this.secondaryFiles = (Object) secondaryFiles;	1✔
337	this.streamable = (java.util.Optional<Boolean>) streamable;	1✔
338	this.doc = (Object) doc;	1✔
339	this.id = (java.util.Optional<String>) id;	1✔
340	this.format = (Object) format;	1✔
341	this.type = (Object) type;	1✔
342	for (String field:__doc.keySet()) {	1✔
343	if (!attrs.contains(field)) {	1✔
NEW 344	if (field.contains(":")) {	×
NEW 345	String expanded_field = __loadingOptions.expandUrl(field, "", false, false, null);	×
NEW 346	extensionFields_.put(expanded_field, __doc.get(field));	×
347	}
348	}
349	}	1✔
350	}	1✔
351	private java.util.List<String> attrs = java.util.Arrays.asList("label", "secondaryFiles", "streamable", "doc", "id", "format", "type");	1✔
352	}

common-workflow-language / cwljava / #394

Source File Press 'n' to go to next uncovered line, 'b' for previous

Source File
Press 'n' to go to next uncovered line, 'b' for previous