#394

Committed 31 Oct 2025 04:10PM UTC coverage: 57.972% (-1.6%) from 59.538%

Build # #394

Build Type

push

github

Committed by

mr-c

Commit Message

rename package to a namespace that we control

Coverage Stats

7575 of 12994 new or added lines in 261 files covered. (58.3%)

7752 of 13372 relevant lines covered (57.97%)

0.58 hits per line

Source File
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61.76

/src/main/java/org/commonwl/cwlsdk/cwl1_1/InputBindingImpl.java

// Copyright Common Workflow Language project contributors
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
//      http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.

package org.commonwl.cwlsdk.cwl1_1;

import org.commonwl.cwlsdk.cwl1_1.utils.LoaderInstances;
import org.commonwl.cwlsdk.cwl1_1.utils.LoadingOptions;
import org.commonwl.cwlsdk.cwl1_1.utils.LoadingOptionsBuilder;
import org.commonwl.cwlsdk.cwl1_1.utils.SaveableImpl;
import org.commonwl.cwlsdk.cwl1_1.utils.ValidationException;

/**
* Auto-generated class implementation for <I>https://w3id.org/cwl/cwl#InputBinding</I><BR>
 */
public class InputBindingImpl extends SaveableImpl implements InputBinding {
  private LoadingOptions loadingOptions_ = new LoadingOptionsBuilder().build();
  private java.util.Map<String, Object> extensionFields_ =
      new java.util.HashMap<String, Object>();
  public LoadingOptions getLoadingOptions() {
    return this.loadingOptions_;
  }
  public java.util.Map<String, Object> getExtensionFields() {
    return this.extensionFields_;
  }

  private java.util.Optional<Boolean> loadContents;

  /**
   * Getter for property <I>https://w3id.org/cwl/cwl#InputBinding/loadContents</I><BR>
   * <BLOCKQUOTE>
   * Use of `loadContents` in `InputBinding` is deprecated.
   * Preserved for v1.0 backwards compatability.  Will be removed in
   * CWL v2.0.  Use `InputParameter.loadContents` instead.
   * 
   * Only valid when `type: File` or is an array of `items: File`.
   * 
   * Read up to the first 64 KiB of text from the file and place it in the
   * "contents" field of the file object for use by expressions.
   *    * </BLOCKQUOTE>
   */

  public java.util.Optional<Boolean> getLoadContents() {
    return this.loadContents;
  }

  /**
   * Used by {@link org.commonwl.cwlsdk.cwl1_1.utils.RootLoader} to construct instances of InputBindingImpl.
   *
   * @param __doc_            Document fragment to load this record object from (presumably a
                              {@link java.util.Map}).
   * @param __baseUri_        Base URI to generate child document IDs against.
   * @param __loadingOptions  Context for loading URIs and populating objects.
   * @param __docRoot_        ID at this position in the document (if available) (maybe?)
   * @throws ValidationException If the document fragment is not a {@link java.util.Map}
   *                             or validation of fields fails.
   */
  public InputBindingImpl(
      final Object __doc_,
      final String __baseUri_,
      LoadingOptions __loadingOptions,
      final String __docRoot_) {
    super(__doc_, __baseUri_, __loadingOptions, __docRoot_);
    // Prefix plumbing variables with '__' to reduce likelihood of collision with
    // generated names.
    String __baseUri = __baseUri_;
    String __docRoot = __docRoot_;
    if (!(__doc_ instanceof java.util.Map)) {
      throw new ValidationException("InputBindingImpl called on non-map");
    }
    final java.util.Map<String, Object> __doc = (java.util.Map<String, Object>) __doc_;
    final java.util.List<ValidationException> __errors =
        new java.util.ArrayList<ValidationException>();
    if (__loadingOptions != null) {
      this.loadingOptions_ = __loadingOptions;
    }
    java.util.Optional<Boolean> loadContents;

    if (__doc.containsKey("loadContents")) {
      try {
        loadContents =
            LoaderInstances
                .optional_BooleanInstance
                .loadField(__doc.get("loadContents"), __baseUri, __loadingOptions);
      } catch (ValidationException e) {
        loadContents = null; // won't be used but prevents compiler from complaining.
        final String __message = "the `loadContents` field is not valid because:";
        __errors.add(new ValidationException(__message, e));
      }

    } else {
      loadContents = null;
    }
    if (!__errors.isEmpty()) {
      throw new ValidationException("Trying 'RecordField'", __errors);
    }
    this.loadContents = (java.util.Optional<Boolean>) loadContents;
    for (String field:__doc.keySet()) {
      if (!attrs.contains(field)) {
        if (field.contains(":")) {
          String expanded_field = __loadingOptions.expandUrl(field, "", false, false, null);
          extensionFields_.put(expanded_field, __doc.get(field));
        }
      }
    }
  }
  private java.util.List<String> attrs = java.util.Arrays.asList("loadContents");
}

1	// Copyright Common Workflow Language project contributors
2	//
3	// Licensed under the Apache License, Version 2.0 (the "License");
4	// you may not use this file except in compliance with the License.
5	// You may obtain a copy of the License at
6	//
7	// http://www.apache.org/licenses/LICENSE-2.0
8	//
9	// Unless required by applicable law or agreed to in writing, software
10	// distributed under the License is distributed on an "AS IS" BASIS,
11	// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12	// See the License for the specific language governing permissions and
13	// limitations under the License.
14
15	package org.commonwl.cwlsdk.cwl1_1;
16
17	import org.commonwl.cwlsdk.cwl1_1.utils.LoaderInstances;
18	import org.commonwl.cwlsdk.cwl1_1.utils.LoadingOptions;
19	import org.commonwl.cwlsdk.cwl1_1.utils.LoadingOptionsBuilder;
20	import org.commonwl.cwlsdk.cwl1_1.utils.SaveableImpl;
21	import org.commonwl.cwlsdk.cwl1_1.utils.ValidationException;
22
23	/**
24	* Auto-generated class implementation for <I>https://w3id.org/cwl/cwl#InputBinding</I><BR>
25	*/
26	public class InputBindingImpl extends SaveableImpl implements InputBinding {
27	private LoadingOptions loadingOptions_ = new LoadingOptionsBuilder().build();	1✔
28	private java.util.Map<String, Object> extensionFields_ =	1✔
29	new java.util.HashMap<String, Object>();
30	public LoadingOptions getLoadingOptions() {
NEW 31	return this.loadingOptions_;	×
32	}
33	public java.util.Map<String, Object> getExtensionFields() {
NEW 34	return this.extensionFields_;	×
35	}
36
37	private java.util.Optional<Boolean> loadContents;
38
39	/**
40	* Getter for property <I>https://w3id.org/cwl/cwl#InputBinding/loadContents</I><BR>
41	* <BLOCKQUOTE>
42	* Use of `loadContents` in `InputBinding` is deprecated.
43	* Preserved for v1.0 backwards compatability. Will be removed in
44	* CWL v2.0. Use `InputParameter.loadContents` instead.
45	*
46	* Only valid when `type: File` or is an array of `items: File`.
47	*
48	* Read up to the first 64 KiB of text from the file and place it in the
49	* "contents" field of the file object for use by expressions.
50	* * </BLOCKQUOTE>
51	*/
52
53	public java.util.Optional<Boolean> getLoadContents() {
NEW 54	return this.loadContents;	×
55	}
56
57	/**
58	* Used by {@link org.commonwl.cwlsdk.cwl1_1.utils.RootLoader} to construct instances of InputBindingImpl.
59	*
60	* @param __doc_ Document fragment to load this record object from (presumably a
61	{@link java.util.Map}).
62	* @param __baseUri_ Base URI to generate child document IDs against.
63	* @param __loadingOptions Context for loading URIs and populating objects.
64	* @param __docRoot_ ID at this position in the document (if available) (maybe?)
65	* @throws ValidationException If the document fragment is not a {@link java.util.Map}
66	* or validation of fields fails.
67	*/
68	public InputBindingImpl(
69	final Object __doc_,
70	final String __baseUri_,
71	LoadingOptions __loadingOptions,
72	final String __docRoot_) {
73	super(__doc_, __baseUri_, __loadingOptions, __docRoot_);	1✔
74	// Prefix plumbing variables with '__' to reduce likelihood of collision with
75	// generated names.
76	String __baseUri = __baseUri_;	1✔
77	String __docRoot = __docRoot_;	1✔
78	if (!(__doc_ instanceof java.util.Map)) {	1✔
NEW 79	throw new ValidationException("InputBindingImpl called on non-map");	×
80	}
81	final java.util.Map<String, Object> __doc = (java.util.Map<String, Object>) __doc_;	1✔
82	final java.util.List<ValidationException> __errors =	1✔
83	new java.util.ArrayList<ValidationException>();
84	if (__loadingOptions != null) {	1✔
85	this.loadingOptions_ = __loadingOptions;	1✔
86	}
87	java.util.Optional<Boolean> loadContents;
88
89	if (__doc.containsKey("loadContents")) {	1✔
90	try {
91	loadContents =	1✔
92	LoaderInstances
93	.optional_BooleanInstance
94	.loadField(__doc.get("loadContents"), __baseUri, __loadingOptions);	1✔
NEW 95	} catch (ValidationException e) {	×
NEW 96	loadContents = null; // won't be used but prevents compiler from complaining.	×
NEW 97	final String __message = "the `loadContents` field is not valid because:";	×
NEW 98	__errors.add(new ValidationException(__message, e));	×
99	}	1✔
100
101	} else {
NEW 102	loadContents = null;	×
103	}
104	if (!__errors.isEmpty()) {	1✔
NEW 105	throw new ValidationException("Trying 'RecordField'", __errors);	×
106	}
107	this.loadContents = (java.util.Optional<Boolean>) loadContents;	1✔
108	for (String field:__doc.keySet()) {	1✔
109	if (!attrs.contains(field)) {	1✔
NEW 110	if (field.contains(":")) {	×
NEW 111	String expanded_field = __loadingOptions.expandUrl(field, "", false, false, null);	×
NEW 112	extensionFields_.put(expanded_field, __doc.get(field));	×
113	}
114	}
115	}	1✔
116	}	1✔
117	private java.util.List<String> attrs = java.util.Arrays.asList("loadContents");	1✔
118	}

common-workflow-language / cwljava / #394

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