#389

Committed 30 Oct 2025 05:13PM UTC coverage: 58.693% (-0.8%) from 59.538%

Build # #389

Build Type

Pull #218

github

Committed by

web-flow

Commit Message

Merge 98b159202 into befd7e4b9

Pull Request Pull Request #218: Populate the extensionFields; add public accessors for LoadingOptions

Run Details

230 of 569 new or added lines in 67 files covered. (40.42%)

28 existing lines in 27 files now uncovered.

7535 of 12838 relevant lines covered (58.69%)

0.59 hits per line

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80.49

/src/main/java/org/w3id/cwl/cwl1_2/EnvVarRequirementImpl.java

// Copyright Common Workflow Language project contributors
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
//      http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.

package org.w3id.cwl.cwl1_2;

import org.w3id.cwl.cwl1_2.utils.LoaderInstances;
import org.w3id.cwl.cwl1_2.utils.LoadingOptions;
import org.w3id.cwl.cwl1_2.utils.LoadingOptionsBuilder;
import org.w3id.cwl.cwl1_2.utils.SaveableImpl;
import org.w3id.cwl.cwl1_2.utils.ValidationException;

/**
* Auto-generated class implementation for <I>https://w3id.org/cwl/cwl#EnvVarRequirement</I><BR> <BLOCKQUOTE>
 Define a list of environment variables which will be set in the
 execution environment of the tool.  See `EnvironmentDef` for details.
  </BLOCKQUOTE>
 */
public class EnvVarRequirementImpl extends SaveableImpl implements EnvVarRequirement {
  private LoadingOptions loadingOptions_ = new LoadingOptionsBuilder().build();
  private java.util.Map<String, Object> extensionFields_ =
      new java.util.HashMap<String, Object>();
  public LoadingOptions getLoadingOptions() {
    return this.loadingOptions_;
  }
  public java.util.Map<String, Object> getExtensionFields() {
    return this.extensionFields_;
  }

  private EnvVarRequirement_class class_;

  /**
   * Getter for property <I>https://w3id.org/cwl/cwl#EnvVarRequirement/class</I><BR>
   * <BLOCKQUOTE>
   * Always 'EnvVarRequirement'   * </BLOCKQUOTE>
   */

  public EnvVarRequirement_class getClass_() {
    return this.class_;
  }

  private java.util.List<Object> envDef;

  /**
   * Getter for property <I>https://w3id.org/cwl/cwl#EnvVarRequirement/envDef</I><BR>
   * <BLOCKQUOTE>
   * The list of environment variables.   * </BLOCKQUOTE>
   */

  public java.util.List<Object> getEnvDef() {
    return this.envDef;
  }

  /**
   * Used by {@link org.w3id.cwl.cwl1_2.utils.RootLoader} to construct instances of EnvVarRequirementImpl.
   *
   * @param __doc_            Document fragment to load this record object from (presumably a
                              {@link java.util.Map}).
   * @param __baseUri_        Base URI to generate child document IDs against.
   * @param __loadingOptions  Context for loading URIs and populating objects.
   * @param __docRoot_        ID at this position in the document (if available) (maybe?)
   * @throws ValidationException If the document fragment is not a {@link java.util.Map}
   *                             or validation of fields fails.
   */
  public EnvVarRequirementImpl(
      final Object __doc_,
      final String __baseUri_,
      LoadingOptions __loadingOptions,
      final String __docRoot_) {
    super(__doc_, __baseUri_, __loadingOptions, __docRoot_);
    // Prefix plumbing variables with '__' to reduce likelihood of collision with
    // generated names.
    String __baseUri = __baseUri_;
    String __docRoot = __docRoot_;
    if (!(__doc_ instanceof java.util.Map)) {
      throw new ValidationException("EnvVarRequirementImpl called on non-map");
    }
    final java.util.Map<String, Object> __doc = (java.util.Map<String, Object>) __doc_;
    final java.util.List<ValidationException> __errors =
        new java.util.ArrayList<ValidationException>();
    if (__loadingOptions != null) {
      this.loadingOptions_ = __loadingOptions;
    }
    EnvVarRequirement_class class_;
    try {
      class_ =
          LoaderInstances
              .uri_EnvVarRequirement_class_False_True_None_None
              .loadField(__doc.get("class"), __baseUri, __loadingOptions);
    } catch (ValidationException e) {
      class_ = null; // won't be used but prevents compiler from complaining.
      final String __message = "the `class` field is not valid because:";
      __errors.add(new ValidationException(__message, e));
    }
    java.util.List<Object> envDef;
    try {
      envDef =
          LoaderInstances
              .idmap_envDef_array_of_EnvironmentDef
              .loadField(__doc.get("envDef"), __baseUri, __loadingOptions);
    } catch (ValidationException e) {
      envDef = null; // won't be used but prevents compiler from complaining.
      final String __message = "the `envDef` field is not valid because:";
      __errors.add(new ValidationException(__message, e));
    }
    if (!__errors.isEmpty()) {
      throw new ValidationException("Trying 'RecordField'", __errors);
    }
    this.class_ = (EnvVarRequirement_class) class_;
    this.envDef = (java.util.List<Object>) envDef;
    for (String field:__doc.keySet()) {
      if (!attrs.contains(field)) {
        if (field.contains(":")) {
          String expanded_field = __loadingOptions.expandUrl(field, "", false, false, null);
          extensionFields_.put(expanded_field, __doc.get(field));
        }
      }
    }
  }
  private java.util.List<String> attrs = java.util.Arrays.asList("class", "envDef");
}

1	// Copyright Common Workflow Language project contributors
2	//
3	// Licensed under the Apache License, Version 2.0 (the "License");
4	// you may not use this file except in compliance with the License.
5	// You may obtain a copy of the License at
6	//
7	// http://www.apache.org/licenses/LICENSE-2.0
8	//
9	// Unless required by applicable law or agreed to in writing, software
10	// distributed under the License is distributed on an "AS IS" BASIS,
11	// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12	// See the License for the specific language governing permissions and
13	// limitations under the License.
14
15	package org.w3id.cwl.cwl1_2;
16
17	import org.w3id.cwl.cwl1_2.utils.LoaderInstances;
18	import org.w3id.cwl.cwl1_2.utils.LoadingOptions;
19	import org.w3id.cwl.cwl1_2.utils.LoadingOptionsBuilder;
20	import org.w3id.cwl.cwl1_2.utils.SaveableImpl;
21	import org.w3id.cwl.cwl1_2.utils.ValidationException;
22
23	/**
24	* Auto-generated class implementation for <I>https://w3id.org/cwl/cwl#EnvVarRequirement</I><BR> <BLOCKQUOTE>
25	Define a list of environment variables which will be set in the
26	execution environment of the tool. See `EnvironmentDef` for details.
27	</BLOCKQUOTE>
28	*/
29	public class EnvVarRequirementImpl extends SaveableImpl implements EnvVarRequirement {
30	private LoadingOptions loadingOptions_ = new LoadingOptionsBuilder().build();	1✔
31	private java.util.Map<String, Object> extensionFields_ =	1✔
32	new java.util.HashMap<String, Object>();
33	public LoadingOptions getLoadingOptions() {
NEW 34	return this.loadingOptions_;	×
35	}
36	public java.util.Map<String, Object> getExtensionFields() {
37	return this.extensionFields_;	×
38	}
39
40	private EnvVarRequirement_class class_;
41
42	/**
43	* Getter for property <I>https://w3id.org/cwl/cwl#EnvVarRequirement/class</I><BR>
44	* <BLOCKQUOTE>
45	* Always 'EnvVarRequirement' * </BLOCKQUOTE>
46	*/
47
48	public EnvVarRequirement_class getClass_() {
49	return this.class_;	×
50	}
51
52	private java.util.List<Object> envDef;
53
54	/**
55	* Getter for property <I>https://w3id.org/cwl/cwl#EnvVarRequirement/envDef</I><BR>
56	* <BLOCKQUOTE>
57	* The list of environment variables. * </BLOCKQUOTE>
58	*/
59
60	public java.util.List<Object> getEnvDef() {
61	return this.envDef;	×
62	}
63
64	/**
65	* Used by {@link org.w3id.cwl.cwl1_2.utils.RootLoader} to construct instances of EnvVarRequirementImpl.
66	*
67	* @param __doc_ Document fragment to load this record object from (presumably a
68	{@link java.util.Map}).
69	* @param __baseUri_ Base URI to generate child document IDs against.
70	* @param __loadingOptions Context for loading URIs and populating objects.
71	* @param __docRoot_ ID at this position in the document (if available) (maybe?)
72	* @throws ValidationException If the document fragment is not a {@link java.util.Map}
73	* or validation of fields fails.
74	*/
75	public EnvVarRequirementImpl(
76	final Object __doc_,
77	final String __baseUri_,
78	LoadingOptions __loadingOptions,
79	final String __docRoot_) {
80	super(__doc_, __baseUri_, __loadingOptions, __docRoot_);	1✔
81	// Prefix plumbing variables with '__' to reduce likelihood of collision with
82	// generated names.
83	String __baseUri = __baseUri_;	1✔
84	String __docRoot = __docRoot_;	1✔
85	if (!(__doc_ instanceof java.util.Map)) {	1✔
86	throw new ValidationException("EnvVarRequirementImpl called on non-map");	×
87	}
88	final java.util.Map<String, Object> __doc = (java.util.Map<String, Object>) __doc_;	1✔
89	final java.util.List<ValidationException> __errors =	1✔
90	new java.util.ArrayList<ValidationException>();
91	if (__loadingOptions != null) {	1✔
92	this.loadingOptions_ = __loadingOptions;	1✔
93	}
94	EnvVarRequirement_class class_;
95	try {
96	class_ =	1✔
97	LoaderInstances
98	.uri_EnvVarRequirement_class_False_True_None_None
99	.loadField(__doc.get("class"), __baseUri, __loadingOptions);	1✔
100	} catch (ValidationException e) {	1✔
101	class_ = null; // won't be used but prevents compiler from complaining.	1✔
102	final String __message = "the `class` field is not valid because:";	1✔
103	__errors.add(new ValidationException(__message, e));	1✔
104	}	1✔
105	java.util.List<Object> envDef;
106	try {
107	envDef =	1✔
108	LoaderInstances
109	.idmap_envDef_array_of_EnvironmentDef
110	.loadField(__doc.get("envDef"), __baseUri, __loadingOptions);	1✔
111	} catch (ValidationException e) {	1✔
112	envDef = null; // won't be used but prevents compiler from complaining.	1✔
113	final String __message = "the `envDef` field is not valid because:";	1✔
114	__errors.add(new ValidationException(__message, e));	1✔
115	}	1✔
116	if (!__errors.isEmpty()) {	1✔
117	throw new ValidationException("Trying 'RecordField'", __errors);	1✔
118	}
119	this.class_ = (EnvVarRequirement_class) class_;	1✔
120	this.envDef = (java.util.List<Object>) envDef;	1✔
121	for (String field:__doc.keySet()) {	1✔
122	if (!attrs.contains(field)) {	1✔
NEW 123	if (field.contains(":")) {	×
NEW 124	String expanded_field = __loadingOptions.expandUrl(field, "", false, false, null);	×
NEW 125	extensionFields_.put(expanded_field, __doc.get(field));	×
126	}
127	}
128	}	1✔
129	}	1✔
130	private java.util.List<String> attrs = java.util.Arrays.asList("class", "envDef");	1✔
131	}

common-workflow-language / cwljava / #389

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