#388

Committed 30 Oct 2025 04:55PM UTC coverage: 58.693% (-0.8%) from 59.538%

Build # #388

Build Type

Pull #218

github

Committed by

web-flow

Commit Message

Merge ab8576a5b into befd7e4b9

Pull Request Pull Request #218: Populate the extensionFields; add public accessors for LoadingOptions

Run Details

230 of 569 new or added lines in 67 files covered. (40.42%)

28 existing lines in 27 files now uncovered.

7535 of 12838 relevant lines covered (58.69%)

0.59 hits per line

Source File
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0.0

/src/main/java/org/w3id/cwl/cwl1_2/CommandLineBindableImpl.java

// Copyright Common Workflow Language project contributors
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
// You may obtain a copy of the License at
//
//      http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.

package org.w3id.cwl.cwl1_2;

import org.w3id.cwl.cwl1_2.utils.LoaderInstances;
import org.w3id.cwl.cwl1_2.utils.LoadingOptions;
import org.w3id.cwl.cwl1_2.utils.LoadingOptionsBuilder;
import org.w3id.cwl.cwl1_2.utils.SaveableImpl;
import org.w3id.cwl.cwl1_2.utils.ValidationException;

/**
* Auto-generated class implementation for <I>https://w3id.org/cwl/cwl#CommandLineBindable</I><BR>
 */
public class CommandLineBindableImpl extends SaveableImpl implements CommandLineBindable {
  private LoadingOptions loadingOptions_ = new LoadingOptionsBuilder().build();
  private java.util.Map<String, Object> extensionFields_ =
      new java.util.HashMap<String, Object>();
  public LoadingOptions getLoadingOptions() {
    return this.loadingOptions_;
  }
  public java.util.Map<String, Object> getExtensionFields() {
    return this.extensionFields_;
  }

  private java.util.Optional<CommandLineBinding> inputBinding;

  /**
   * Getter for property <I>https://w3id.org/cwl/cwl#CommandLineBindable/inputBinding</I><BR>
   * <BLOCKQUOTE>
   * Describes how to turn this object into command line arguments.   * </BLOCKQUOTE>
   */

  public java.util.Optional<CommandLineBinding> getInputBinding() {
    return this.inputBinding;
  }

  /**
   * Used by {@link org.w3id.cwl.cwl1_2.utils.RootLoader} to construct instances of CommandLineBindableImpl.
   *
   * @param __doc_            Document fragment to load this record object from (presumably a
                              {@link java.util.Map}).
   * @param __baseUri_        Base URI to generate child document IDs against.
   * @param __loadingOptions  Context for loading URIs and populating objects.
   * @param __docRoot_        ID at this position in the document (if available) (maybe?)
   * @throws ValidationException If the document fragment is not a {@link java.util.Map}
   *                             or validation of fields fails.
   */
  public CommandLineBindableImpl(
      final Object __doc_,
      final String __baseUri_,
      LoadingOptions __loadingOptions,
      final String __docRoot_) {
    super(__doc_, __baseUri_, __loadingOptions, __docRoot_);
    // Prefix plumbing variables with '__' to reduce likelihood of collision with
    // generated names.
    String __baseUri = __baseUri_;
    String __docRoot = __docRoot_;
    if (!(__doc_ instanceof java.util.Map)) {
      throw new ValidationException("CommandLineBindableImpl called on non-map");
    }
    final java.util.Map<String, Object> __doc = (java.util.Map<String, Object>) __doc_;
    final java.util.List<ValidationException> __errors =
        new java.util.ArrayList<ValidationException>();
    if (__loadingOptions != null) {
      this.loadingOptions_ = __loadingOptions;
    }
    java.util.Optional<CommandLineBinding> inputBinding;

    if (__doc.containsKey("inputBinding")) {
      try {
        inputBinding =
            LoaderInstances
                .optional_CommandLineBinding
                .loadField(__doc.get("inputBinding"), __baseUri, __loadingOptions);
      } catch (ValidationException e) {
        inputBinding = null; // won't be used but prevents compiler from complaining.
        final String __message = "the `inputBinding` field is not valid because:";
        __errors.add(new ValidationException(__message, e));
      }

    } else {
      inputBinding = null;
    }
    if (!__errors.isEmpty()) {
      throw new ValidationException("Trying 'RecordField'", __errors);
    }
    this.inputBinding = (java.util.Optional<CommandLineBinding>) inputBinding;
    for (String field:__doc.keySet()) {
      if (!attrs.contains(field)) {
        if (field.contains(":")) {
          String expanded_field = __loadingOptions.expandUrl(field, "", false, false, null);
          extensionFields_.put(expanded_field, __doc.get(field));
        }
      }
    }
  }
  private java.util.List<String> attrs = java.util.Arrays.asList("inputBinding");
}

1	// Copyright Common Workflow Language project contributors
2	//
3	// Licensed under the Apache License, Version 2.0 (the "License");
4	// you may not use this file except in compliance with the License.
5	// You may obtain a copy of the License at
6	//
7	// http://www.apache.org/licenses/LICENSE-2.0
8	//
9	// Unless required by applicable law or agreed to in writing, software
10	// distributed under the License is distributed on an "AS IS" BASIS,
11	// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
12	// See the License for the specific language governing permissions and
13	// limitations under the License.
14
15	package org.w3id.cwl.cwl1_2;
16
17	import org.w3id.cwl.cwl1_2.utils.LoaderInstances;
18	import org.w3id.cwl.cwl1_2.utils.LoadingOptions;
19	import org.w3id.cwl.cwl1_2.utils.LoadingOptionsBuilder;
20	import org.w3id.cwl.cwl1_2.utils.SaveableImpl;
21	import org.w3id.cwl.cwl1_2.utils.ValidationException;
22
23	/**
24	* Auto-generated class implementation for <I>https://w3id.org/cwl/cwl#CommandLineBindable</I><BR>
25	*/
26	public class CommandLineBindableImpl extends SaveableImpl implements CommandLineBindable {
27	private LoadingOptions loadingOptions_ = new LoadingOptionsBuilder().build();	×
28	private java.util.Map<String, Object> extensionFields_ =	×
29	new java.util.HashMap<String, Object>();
30	public LoadingOptions getLoadingOptions() {
NEW 31	return this.loadingOptions_;	×
32	}
33	public java.util.Map<String, Object> getExtensionFields() {
34	return this.extensionFields_;	×
35	}
36
37	private java.util.Optional<CommandLineBinding> inputBinding;
38
39	/**
40	* Getter for property <I>https://w3id.org/cwl/cwl#CommandLineBindable/inputBinding</I><BR>
41	* <BLOCKQUOTE>
42	* Describes how to turn this object into command line arguments. * </BLOCKQUOTE>
43	*/
44
45	public java.util.Optional<CommandLineBinding> getInputBinding() {
46	return this.inputBinding;	×
47	}
48
49	/**
50	* Used by {@link org.w3id.cwl.cwl1_2.utils.RootLoader} to construct instances of CommandLineBindableImpl.
51	*
52	* @param __doc_ Document fragment to load this record object from (presumably a
53	{@link java.util.Map}).
54	* @param __baseUri_ Base URI to generate child document IDs against.
55	* @param __loadingOptions Context for loading URIs and populating objects.
56	* @param __docRoot_ ID at this position in the document (if available) (maybe?)
57	* @throws ValidationException If the document fragment is not a {@link java.util.Map}
58	* or validation of fields fails.
59	*/
60	public CommandLineBindableImpl(
61	final Object __doc_,
62	final String __baseUri_,
63	LoadingOptions __loadingOptions,
64	final String __docRoot_) {
65	super(__doc_, __baseUri_, __loadingOptions, __docRoot_);	×
66	// Prefix plumbing variables with '__' to reduce likelihood of collision with
67	// generated names.
68	String __baseUri = __baseUri_;	×
69	String __docRoot = __docRoot_;	×
70	if (!(__doc_ instanceof java.util.Map)) {	×
71	throw new ValidationException("CommandLineBindableImpl called on non-map");	×
72	}
73	final java.util.Map<String, Object> __doc = (java.util.Map<String, Object>) __doc_;	×
74	final java.util.List<ValidationException> __errors =	×
75	new java.util.ArrayList<ValidationException>();
76	if (__loadingOptions != null) {	×
77	this.loadingOptions_ = __loadingOptions;	×
78	}
79	java.util.Optional<CommandLineBinding> inputBinding;
80
81	if (__doc.containsKey("inputBinding")) {	×
82	try {
83	inputBinding =	×
84	LoaderInstances
85	.optional_CommandLineBinding
86	.loadField(__doc.get("inputBinding"), __baseUri, __loadingOptions);	×
87	} catch (ValidationException e) {	×
88	inputBinding = null; // won't be used but prevents compiler from complaining.	×
89	final String __message = "the `inputBinding` field is not valid because:";	×
90	__errors.add(new ValidationException(__message, e));	×
91	}	×
92
93	} else {
94	inputBinding = null;	×
95	}
96	if (!__errors.isEmpty()) {	×
97	throw new ValidationException("Trying 'RecordField'", __errors);	×
98	}
99	this.inputBinding = (java.util.Optional<CommandLineBinding>) inputBinding;	×
NEW 100	for (String field:__doc.keySet()) {	×
NEW 101	if (!attrs.contains(field)) {	×
NEW 102	if (field.contains(":")) {	×
NEW 103	String expanded_field = __loadingOptions.expandUrl(field, "", false, false, null);	×
NEW 104	extensionFields_.put(expanded_field, __doc.get(field));	×
105	}
106	}
NEW 107	}	×
UNCOV 108	}	×
NEW 109	private java.util.List<String> attrs = java.util.Arrays.asList("inputBinding");	×
110	}

common-workflow-language / cwljava / #388

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