17852532121

Committed 19 Sep 2025 08:10AM UTC coverage: 13.568% (-0.3%) from 13.87%

Build # 17852532121

Build Type

push

github

Committed by

tkuhn

Commit Message

feat: Switch to QueryRef provided by nanopub, using multimap

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428 of 4008 branches covered (10.68%)

Branch coverage included in aggregate %.

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0.0

src/main/java/com/knowledgepixels/nanodash/connector/GenOverviewPage.java

package com.knowledgepixels.nanodash.connector;

import java.util.ArrayList;
import java.util.List;

import org.apache.wicket.ajax.AjaxRequestTarget;
import org.apache.wicket.ajax.markup.html.AjaxLink;
import org.apache.wicket.markup.html.WebMarkupContainer;
import org.apache.wicket.markup.html.basic.Label;
import org.apache.wicket.markup.html.image.Image;
import org.apache.wicket.markup.html.link.BookmarkablePageLink;
import org.apache.wicket.markup.html.link.ExternalLink;
import org.apache.wicket.markup.repeater.Item;
import org.apache.wicket.markup.repeater.data.DataView;
import org.apache.wicket.markup.repeater.data.ListDataProvider;
import org.apache.wicket.request.mapper.parameter.PageParameters;
import org.apache.wicket.request.resource.PackageResourceReference;
import org.eclipse.rdf4j.model.IRI;
import org.nanopub.Nanopub;
import org.nanopub.extra.services.ApiResponse;
import org.nanopub.extra.services.ApiResponseEntry;
import org.nanopub.extra.services.QueryRef;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

import com.knowledgepixels.nanodash.ApiCache;
import com.knowledgepixels.nanodash.NanodashPreferences;
import com.knowledgepixels.nanodash.NanodashSession;
import com.knowledgepixels.nanodash.User;
import com.knowledgepixels.nanodash.Utils;
import com.knowledgepixels.nanodash.component.TitleBar;
import com.knowledgepixels.nanodash.page.OrcidLoginPage;
import com.knowledgepixels.nanodash.page.PublishPage;

/**
 * Overview page for a connector journal.
 */
public class GenOverviewPage extends ConnectorPage {

    private static final Logger logger = LoggerFactory.getLogger(GenOverviewPage.class);

    /**
     * The mount path for this page.
     */
    public static final String MOUNT_PATH = "/connector";

    private ConnectorConfig config;

    /**
     * Constructor for the overview page.
     *
     * @param params the page parameters, which should contain the journal ID
     */
    public GenOverviewPage(PageParameters params) {
        super(params);
        final String journalId = params.get("journal").toString();
        config = ConnectorConfig.get(journalId);

        add(new TitleBar("titlebar", this, "connectors"));
        add(new Image("logo", new PackageResourceReference(getConfig().getClass(), getConfig().getLogoFileName())));

        if (getConfig().getTechnicalEditorIds().contains(NanodashSession.get().getUserIri())) {
            WebMarkupContainer technicalEditorActions = new WebMarkupContainer("technical-editor-actions");

            technicalEditorActions.add(new BookmarkablePageLink<Void>("publish-article-metadata", PublishPage.class,
                    new PageParameters().add("template", "https://w3id.org/np/RA48p4Ct8tWL--rIc1Dcr2BcYpW_7X1pfuv_2LK3anolY")
                            .add("template-version", "latest")
                            .add("param_journal", getConfig().getJournalIssn())
                            .add("param_journal-title", getConfig().getJournalName())
                            .add("prtemplate", "https://w3id.org/np/RAekcN47h13fk6ZK4XiObgGgk-qB01sLOjyGyhMCq_jT4")
                            .add("pitemplate1", "https://w3id.org/np/RA5R_qv3VsZIrDKd8Mr37x3HoKCsKkwN5tJVqgQsKhjTE")
                            .add("piparam1_type", getConfig().getNanopubType() == null ? "" : getConfig().getNanopubType().stringValue())
                            .add("pitemplate2", "https://w3id.org/np/RA16U9Wo30ObhrK1NzH7EsmVRiRtvEuEA_Dfc-u8WkUCA")
                            .add("target-namespace", getConfig().getTargetNamespace() == null ? "https://w3id.org/np/" : getConfig().getTargetNamespace())
            ));
            add(technicalEditorActions);
        } else {
            add(new WebMarkupContainer("technical-editor-actions").setVisible(false));
        }

        try {

            final WebMarkupContainer c = new WebMarkupContainer("owncandidates-component");
            c.setOutputMarkupId(true);
            add(c);

            if (NanodashSession.get().getUserIri() != null) {
                QueryRef queryRef = new QueryRef(getConfig().getCandidateNanopubsApiCall(), "creator", NanodashSession.get().getUserIri().stringValue());
                ApiResponse resp = ApiCache.retrieveResponse(queryRef);
                while (resp == null) {
                    // we only get here in case of second-generation API calls
                    // TODO Do this in an AJAX way:
                    try {
                        Thread.sleep(200);
                    } catch (InterruptedException ex) {
                        logger.error("Thread interrupted", ex);
                    }
                    resp = ApiCache.retrieveResponse(queryRef);
                }

                final List<ApiResponseEntry> listData = new ArrayList<ApiResponseEntry>();
                final ArrayList<ApiResponseEntry> fullList = new ArrayList<>();
                for (ApiResponseEntry a : resp.getData()) {
                    if (listData.size() < 10) listData.add(a);
                    // TODO This will become inefficient at some point:
                    fullList.add(a);
                }

                c.add(new DataView<ApiResponseEntry>("own", new ListDataProvider<ApiResponseEntry>(listData)) {

                    @Override
                    protected void populateItem(Item<ApiResponseEntry> item) {
                        ApiResponseEntry e = item.getModelObject();
                        PageParameters params = new PageParameters().add("journal", journalId).add("id", e.get("np")).add("mode", "author");
                        BookmarkablePageLink<Void> l = new BookmarkablePageLink<Void>("ownlink", GenNanopubPage.class, params);
                        l.add(new Label("ownlinktext", "\"" + e.get("label") + "\""));
                        item.add(l);
                        String pubkeyhash = Utils.createSha256HexHash(e.get("pubkey"));
                        String username = User.getShortDisplayNameForPubkeyhash(null, pubkeyhash);
                        item.add(new Label("ownnote", "by " + username + " on " + e.get("date").substring(0, 10)));
                    }

                });

                c.add(new AjaxLink<>("allowncandidates") {

                    @Override
                    public void onClick(AjaxRequestTarget target) {
                        try {
                            listData.clear();
                            listData.addAll(fullList);
                            target.add(c);
                            setVisible(false);
                            target.add(this);
                        } catch (Exception ex) {
                            logger.error("Error showing all candidates", ex);
                        }
                    }

                }.setVisible(fullList.size() > 10));

                add(new BookmarkablePageLink<Void>("create-new", GenSelectPage.class, params));
            } else {
                c.add(new Label("allowncandidates", "").setVisible(false));
                c.add(new Label("own", "").setVisible(false));
                if (NanodashPreferences.get().isOrcidLoginMode()) {
                    String loginUrl = OrcidLoginPage.getOrcidLoginUrl(getMountPath(), getPageParameters());
                    add(new ExternalLink("create-new", loginUrl, "Login to See More"));
                } else {
                    add(new ExternalLink("create-new", Utils.getUrlWithParameters(getMountPath(), getPageParameters()), "Complete Your Profile to See More"));
                }
            }
        } catch (Exception ex) {
            logger.error("Error in own candidates section", ex);
        }

        try {
            final WebMarkupContainer c = new WebMarkupContainer("candidates-component");
            c.setOutputMarkupId(true);
            add(c);

            QueryRef queryRef = new QueryRef(getConfig().getCandidateNanopubsApiCall());
            ApiResponse resp = ApiCache.retrieveResponse(queryRef);
            while (resp == null) {
                // TODO Do this in an AJAX way:
                try {
                    Thread.sleep(200);
                } catch (InterruptedException ex) {
                    logger.error("Thread interrupted", ex);
                }
                resp = ApiCache.retrieveResponse(queryRef);
            }

            final List<ApiResponseEntry> listData = new ArrayList<ApiResponseEntry>();
            final ArrayList<ApiResponseEntry> fullList = new ArrayList<>();
            for (ApiResponseEntry a : resp.getData()) {
                if (listData.size() < 10) listData.add(a);
                // TODO This will become inefficient at some point:
                fullList.add(a);
            }

            c.add(new DataView<ApiResponseEntry>("candidates", new ListDataProvider<ApiResponseEntry>(listData)) {

                @Override
                protected void populateItem(Item<ApiResponseEntry> item) {
                    ApiResponseEntry e = item.getModelObject();
                    PageParameters params = new PageParameters().add("journal", journalId).add("id", e.get("np")).add("mode", "candidate");
                    BookmarkablePageLink<Void> l = new BookmarkablePageLink<Void>("candidatelink", GenNanopubPage.class, params);
                    l.add(new Label("candidatelinktext", "\"" + e.get("label") + "\""));
                    item.add(l);
                    String pubkeyhash = Utils.createSha256HexHash(e.get("pubkey"));
                    String username = User.getShortDisplayNameForPubkeyhash(null, pubkeyhash);
                    item.add(new Label("candidatenote", "by " + username + " on " + e.get("date").substring(0, 10)));
                }

            });

            c.add(new AjaxLink<>("allcandidates") {

                @Override
                public void onClick(AjaxRequestTarget target) {
                    try {
                        listData.clear();
                        listData.addAll(fullList);
                        target.add(c);
                        setVisible(false);
                        target.add(this);
                    } catch (Exception ex) {
                        logger.error("Error in all candidates click", ex);
                    }
                }

            }.setVisible(fullList.size() > 10));

        } catch (Exception ex) {
            logger.error("Error in candidates section", ex);
        }

        if (getConfig().getAcceptedNanopubsApiCall() != null) {
            try {
                final WebMarkupContainer c = new WebMarkupContainer("accepted-component");
                c.setOutputMarkupId(true);
                add(c);

                QueryRef queryRef = new QueryRef(getConfig().getAcceptedNanopubsApiCall());
                ApiResponse resp = ApiCache.retrieveResponse(queryRef);
                while (resp == null) {
                    // TODO Do this in an AJAX way:
                    try {
                        Thread.sleep(200);
                    } catch (InterruptedException ex) {
                        logger.error("Thread interrupted", ex);
                    }
                    resp = ApiCache.retrieveResponse(queryRef);
                }

                final List<ApiResponseEntry> listData = new ArrayList<ApiResponseEntry>();
                final ArrayList<ApiResponseEntry> fullList = new ArrayList<>();
                for (ApiResponseEntry a : resp.getData()) {
                    if (listData.size() < 10) listData.add(a);
                    // TODO This will become inefficient at some point:
                    fullList.add(a);
                }

                c.add(new DataView<ApiResponseEntry>("accepted", new ListDataProvider<ApiResponseEntry>(listData)) {

                    @Override
                    protected void populateItem(Item<ApiResponseEntry> item) {
                        ApiResponseEntry e = item.getModelObject();
                        PageParameters params = new PageParameters().add("journal", journalId).add("id", e.get("np")).add("mode", "final");
                        BookmarkablePageLink<Void> l = new BookmarkablePageLink<Void>("acceptedlink", GenNanopubPage.class, params);
                        l.add(new Label("acceptedlinktext", "\"" + e.get("label") + "\""));
                        item.add(l);
                        IRI firstAuthorIri = Utils.vf.createIRI(e.get("firstAuthor"));

                        // TODO Move this user name extraction to a helper method:
                        String username;
                        if (User.getName(firstAuthorIri) != null) {
                            username = User.getShortDisplayName(firstAuthorIri);
                        } else {
                            try {
                                Nanopub np = Utils.getAsNanopub(e.get("np"));
                                username = Utils.getFoafNameMap(np).get(e.get("firstAuthor"));
                            } catch (Exception ex) {
                                logger.error("Error getting FOAF name for {} in {}", e.get("firstAuthor"), e.get("np"), ex);
                                username = User.getShortDisplayName(firstAuthorIri);
                            }
                        }

                        item.add(new Label("acceptednote", "by " + username + " on " + e.get("date").substring(0, 10)));
                    }

                });

                c.add(new AjaxLink<>("allaccepted") {

                    @Override
                    public void onClick(AjaxRequestTarget target) {
                        try {
                            listData.clear();
                            listData.addAll(fullList);
                            target.add(c);
                            setVisible(false);
                            target.add(this);
                        } catch (Exception ex) {
                            logger.error("Error showing all accepted", ex);
                        }
                    }

                }.setVisible(fullList.size() > 10));

            } catch (Exception ex) {
                logger.error("Error in accepted section", ex);
            }
        }

        if (getConfig().getGeneralReactionsApiCall() != null) {
            try {
                final WebMarkupContainer c = new WebMarkupContainer("reactions-component");
                c.setOutputMarkupId(true);
                add(c);

                QueryRef queryRef = new QueryRef(getConfig().getGeneralReactionsApiCall());
                ApiResponse resp = ApiCache.retrieveResponse(queryRef);
                while (resp == null) {
                    // TODO Do this in an AJAX way:
                    try {
                        Thread.sleep(200);
                    } catch (InterruptedException ex) {
                        logger.error("Thread interrupted", ex);
                    }
                    resp = ApiCache.retrieveResponse(queryRef);
                }

                final List<ApiResponseEntry> listData = new ArrayList<ApiResponseEntry>();
                final ArrayList<ApiResponseEntry> fullList = new ArrayList<>();
                for (ApiResponseEntry a : resp.getData()) {
                    if (listData.size() < 10) listData.add(a);
                    // TODO This will become inefficient at some point:
                    fullList.add(a);
                }

                c.add(new DataView<ApiResponseEntry>("reactions", new ListDataProvider<ApiResponseEntry>(listData)) {

                    @Override
                    protected void populateItem(Item<ApiResponseEntry> item) {
                        ApiResponseEntry e = item.getModelObject();
                        PageParameters params = new PageParameters().add("journal", journalId).add("id", e.get("ref_np")).add("mode", "candidate");
                        BookmarkablePageLink<Void> l = new BookmarkablePageLink<Void>("reactionlink", GenNanopubPage.class, params);
                        l.add(new Label("reactionlinktext", "\"" + e.get("comment") + "\""));
                        item.add(l);
                        String pubkeyhash = Utils.createSha256HexHash(e.get("pubkey"));
                        String username = User.getShortDisplayNameForPubkeyhash(null, pubkeyhash);
                        item.add(new Label("reactionnote", "by " + username + " on " + e.get("date").substring(0, 10)));
                    }

                });

                c.add(new AjaxLink<>("allreactions") {

                    @Override
                    public void onClick(AjaxRequestTarget target) {
                        try {
                            listData.clear();
                            listData.addAll(fullList);
                            target.add(c);
                            setVisible(false);
                            target.add(this);
                        } catch (Exception ex) {
                            logger.error("Error showing all reactions", ex);
                        }
                    }

                }.setVisible(fullList.size() > 10));

            } catch (Exception ex) {
                logger.error("Error in reactions section", ex);
            }
        }

        add(new Label("pagetitle", config.getJournalName() + " | nanodash"));
        add(new Label("journal-name-title", config.getJournalName()));
        add(new ExternalLink("journal-link", config.getJournalUrl(), config.getJournalName()));
        add(new Label("extra-instructions", config.getExtraInstructions()).setEscapeModelStrings(false));

        if (getConfig().getGeneralReactionsApiCall() == null) {
            // TODO Fix this in OverviewPage code once refactoring is finished:
            add(new Label("reactions-component").setVisible(false));
        }
        add(new ExternalLink("support-link", "mailto:contact-project+knowledgepixels-support-desk@incoming.gitlab.com?subject=[" + config.getJournalAbbrev() + "%20general]%20my%20problem/question&body=type%20your%20problem/question%20here"));
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public String getMountPath() {
        return MOUNT_PATH;
    }

}

1	package com.knowledgepixels.nanodash.connector;
2
3	import java.util.ArrayList;
4	import java.util.List;
5
6	import org.apache.wicket.ajax.AjaxRequestTarget;
7	import org.apache.wicket.ajax.markup.html.AjaxLink;
8	import org.apache.wicket.markup.html.WebMarkupContainer;
9	import org.apache.wicket.markup.html.basic.Label;
10	import org.apache.wicket.markup.html.image.Image;
11	import org.apache.wicket.markup.html.link.BookmarkablePageLink;
12	import org.apache.wicket.markup.html.link.ExternalLink;
13	import org.apache.wicket.markup.repeater.Item;
14	import org.apache.wicket.markup.repeater.data.DataView;
15	import org.apache.wicket.markup.repeater.data.ListDataProvider;
16	import org.apache.wicket.request.mapper.parameter.PageParameters;
17	import org.apache.wicket.request.resource.PackageResourceReference;
18	import org.eclipse.rdf4j.model.IRI;
19	import org.nanopub.Nanopub;
20	import org.nanopub.extra.services.ApiResponse;
21	import org.nanopub.extra.services.ApiResponseEntry;
22	import org.nanopub.extra.services.QueryRef;
23	import org.slf4j.Logger;
24	import org.slf4j.LoggerFactory;
25
26	import com.knowledgepixels.nanodash.ApiCache;
27	import com.knowledgepixels.nanodash.NanodashPreferences;
28	import com.knowledgepixels.nanodash.NanodashSession;
29	import com.knowledgepixels.nanodash.User;
30	import com.knowledgepixels.nanodash.Utils;
31	import com.knowledgepixels.nanodash.component.TitleBar;
32	import com.knowledgepixels.nanodash.page.OrcidLoginPage;
33	import com.knowledgepixels.nanodash.page.PublishPage;
34
35	/**
36	* Overview page for a connector journal.
37	*/
38	public class GenOverviewPage extends ConnectorPage {
39
40	private static final Logger logger = LoggerFactory.getLogger(GenOverviewPage.class);	×
41
42	/**
43	* The mount path for this page.
44	*/
45	public static final String MOUNT_PATH = "/connector";
46
47	private ConnectorConfig config;
48
49	/**
50	* Constructor for the overview page.
51	*
52	* @param params the page parameters, which should contain the journal ID
53	*/
54	public GenOverviewPage(PageParameters params) {
55	super(params);	×
56	final String journalId = params.get("journal").toString();	×
57	config = ConnectorConfig.get(journalId);	×
58
59	add(new TitleBar("titlebar", this, "connectors"));	×
60	add(new Image("logo", new PackageResourceReference(getConfig().getClass(), getConfig().getLogoFileName())));	×
61
62	if (getConfig().getTechnicalEditorIds().contains(NanodashSession.get().getUserIri())) {	×
63	WebMarkupContainer technicalEditorActions = new WebMarkupContainer("technical-editor-actions");	×
64
65	technicalEditorActions.add(new BookmarkablePageLink<Void>("publish-article-metadata", PublishPage.class,	×
66	new PageParameters().add("template", "https://w3id.org/np/RA48p4Ct8tWL--rIc1Dcr2BcYpW_7X1pfuv_2LK3anolY")	×
67	.add("template-version", "latest")	×
68	.add("param_journal", getConfig().getJournalIssn())	×
69	.add("param_journal-title", getConfig().getJournalName())	×
70	.add("prtemplate", "https://w3id.org/np/RAekcN47h13fk6ZK4XiObgGgk-qB01sLOjyGyhMCq_jT4")	×
71	.add("pitemplate1", "https://w3id.org/np/RA5R_qv3VsZIrDKd8Mr37x3HoKCsKkwN5tJVqgQsKhjTE")	×
72	.add("piparam1_type", getConfig().getNanopubType() == null ? "" : getConfig().getNanopubType().stringValue())	×
73	.add("pitemplate2", "https://w3id.org/np/RA16U9Wo30ObhrK1NzH7EsmVRiRtvEuEA_Dfc-u8WkUCA")	×
74	.add("target-namespace", getConfig().getTargetNamespace() == null ? "https://w3id.org/np/" : getConfig().getTargetNamespace())	×
75	));
76	add(technicalEditorActions);	×
77	} else {	×
78	add(new WebMarkupContainer("technical-editor-actions").setVisible(false));	×
79	}
80
81	try {
82
83	final WebMarkupContainer c = new WebMarkupContainer("owncandidates-component");	×
84	c.setOutputMarkupId(true);	×
85	add(c);	×
86
87	if (NanodashSession.get().getUserIri() != null) {	×
88	QueryRef queryRef = new QueryRef(getConfig().getCandidateNanopubsApiCall(), "creator", NanodashSession.get().getUserIri().stringValue());	×
89	ApiResponse resp = ApiCache.retrieveResponse(queryRef);	×
90	while (resp == null) {	×
91	// we only get here in case of second-generation API calls
92	// TODO Do this in an AJAX way:
93	try {
94	Thread.sleep(200);	×
95	} catch (InterruptedException ex) {	×
96	logger.error("Thread interrupted", ex);	×
97	}	×
98	resp = ApiCache.retrieveResponse(queryRef);	×
99	}
100
101	final List<ApiResponseEntry> listData = new ArrayList<ApiResponseEntry>();	×
102	final ArrayList<ApiResponseEntry> fullList = new ArrayList<>();	×
103	for (ApiResponseEntry a : resp.getData()) {	×
104	if (listData.size() < 10) listData.add(a);	×
105	// TODO This will become inefficient at some point:
106	fullList.add(a);	×
107	}	×
108
109	c.add(new DataView<ApiResponseEntry>("own", new ListDataProvider<ApiResponseEntry>(listData)) {	×
110
111	@Override
112	protected void populateItem(Item<ApiResponseEntry> item) {
113	ApiResponseEntry e = item.getModelObject();	×
114	PageParameters params = new PageParameters().add("journal", journalId).add("id", e.get("np")).add("mode", "author");	×
115	BookmarkablePageLink<Void> l = new BookmarkablePageLink<Void>("ownlink", GenNanopubPage.class, params);	×
116	l.add(new Label("ownlinktext", "\"" + e.get("label") + "\""));	×
117	item.add(l);	×
118	String pubkeyhash = Utils.createSha256HexHash(e.get("pubkey"));	×
119	String username = User.getShortDisplayNameForPubkeyhash(null, pubkeyhash);	×
120	item.add(new Label("ownnote", "by " + username + " on " + e.get("date").substring(0, 10)));	×
121	}	×
122
123	});
124
125	c.add(new AjaxLink<>("allowncandidates") {	×
126
127	@Override
128	public void onClick(AjaxRequestTarget target) {
129	try {
130	listData.clear();	×
131	listData.addAll(fullList);	×
132	target.add(c);	×
133	setVisible(false);	×
134	target.add(this);	×
135	} catch (Exception ex) {	×
136	logger.error("Error showing all candidates", ex);	×
137	}	×
138	}	×
139
140	}.setVisible(fullList.size() > 10));	×
141
142	add(new BookmarkablePageLink<Void>("create-new", GenSelectPage.class, params));	×
143	} else {	×
144	c.add(new Label("allowncandidates", "").setVisible(false));	×
145	c.add(new Label("own", "").setVisible(false));	×
146	if (NanodashPreferences.get().isOrcidLoginMode()) {	×
147	String loginUrl = OrcidLoginPage.getOrcidLoginUrl(getMountPath(), getPageParameters());	×
148	add(new ExternalLink("create-new", loginUrl, "Login to See More"));	×
149	} else {	×
150	add(new ExternalLink("create-new", Utils.getUrlWithParameters(getMountPath(), getPageParameters()), "Complete Your Profile to See More"));	×
151	}
152	}
153	} catch (Exception ex) {	×
154	logger.error("Error in own candidates section", ex);	×
155	}	×
156
157	try {
158	final WebMarkupContainer c = new WebMarkupContainer("candidates-component");	×
159	c.setOutputMarkupId(true);	×
160	add(c);	×
161
162	QueryRef queryRef = new QueryRef(getConfig().getCandidateNanopubsApiCall());	×
163	ApiResponse resp = ApiCache.retrieveResponse(queryRef);	×
164	while (resp == null) {	×
165	// TODO Do this in an AJAX way:
166	try {
167	Thread.sleep(200);	×
168	} catch (InterruptedException ex) {	×
169	logger.error("Thread interrupted", ex);	×
170	}	×
171	resp = ApiCache.retrieveResponse(queryRef);	×
172	}
173
174	final List<ApiResponseEntry> listData = new ArrayList<ApiResponseEntry>();	×
175	final ArrayList<ApiResponseEntry> fullList = new ArrayList<>();	×
176	for (ApiResponseEntry a : resp.getData()) {	×
177	if (listData.size() < 10) listData.add(a);	×
178	// TODO This will become inefficient at some point:
179	fullList.add(a);	×
180	}	×
181
182	c.add(new DataView<ApiResponseEntry>("candidates", new ListDataProvider<ApiResponseEntry>(listData)) {	×
183
184	@Override
185	protected void populateItem(Item<ApiResponseEntry> item) {
186	ApiResponseEntry e = item.getModelObject();	×
187	PageParameters params = new PageParameters().add("journal", journalId).add("id", e.get("np")).add("mode", "candidate");	×
188	BookmarkablePageLink<Void> l = new BookmarkablePageLink<Void>("candidatelink", GenNanopubPage.class, params);	×
189	l.add(new Label("candidatelinktext", "\"" + e.get("label") + "\""));	×
190	item.add(l);	×
191	String pubkeyhash = Utils.createSha256HexHash(e.get("pubkey"));	×
192	String username = User.getShortDisplayNameForPubkeyhash(null, pubkeyhash);	×
193	item.add(new Label("candidatenote", "by " + username + " on " + e.get("date").substring(0, 10)));	×
194	}	×
195
196	});
197
198	c.add(new AjaxLink<>("allcandidates") {	×
199
200	@Override
201	public void onClick(AjaxRequestTarget target) {
202	try {
203	listData.clear();	×
204	listData.addAll(fullList);	×
205	target.add(c);	×
206	setVisible(false);	×
207	target.add(this);	×
208	} catch (Exception ex) {	×
209	logger.error("Error in all candidates click", ex);	×
210	}	×
211	}	×
212
213	}.setVisible(fullList.size() > 10));	×
214
215	} catch (Exception ex) {	×
216	logger.error("Error in candidates section", ex);	×
217	}	×
218
219	if (getConfig().getAcceptedNanopubsApiCall() != null) {	×
220	try {
221	final WebMarkupContainer c = new WebMarkupContainer("accepted-component");	×
222	c.setOutputMarkupId(true);	×
223	add(c);	×
224
225	QueryRef queryRef = new QueryRef(getConfig().getAcceptedNanopubsApiCall());	×
226	ApiResponse resp = ApiCache.retrieveResponse(queryRef);	×
227	while (resp == null) {	×
228	// TODO Do this in an AJAX way:
229	try {
230	Thread.sleep(200);	×
231	} catch (InterruptedException ex) {	×
232	logger.error("Thread interrupted", ex);	×
233	}	×
234	resp = ApiCache.retrieveResponse(queryRef);	×
235	}
236
237	final List<ApiResponseEntry> listData = new ArrayList<ApiResponseEntry>();	×
238	final ArrayList<ApiResponseEntry> fullList = new ArrayList<>();	×
239	for (ApiResponseEntry a : resp.getData()) {	×
240	if (listData.size() < 10) listData.add(a);	×
241	// TODO This will become inefficient at some point:
242	fullList.add(a);	×
243	}	×
244
245	c.add(new DataView<ApiResponseEntry>("accepted", new ListDataProvider<ApiResponseEntry>(listData)) {	×
246
247	@Override
248	protected void populateItem(Item<ApiResponseEntry> item) {
249	ApiResponseEntry e = item.getModelObject();	×
250	PageParameters params = new PageParameters().add("journal", journalId).add("id", e.get("np")).add("mode", "final");	×
251	BookmarkablePageLink<Void> l = new BookmarkablePageLink<Void>("acceptedlink", GenNanopubPage.class, params);	×
252	l.add(new Label("acceptedlinktext", "\"" + e.get("label") + "\""));	×
253	item.add(l);	×
254	IRI firstAuthorIri = Utils.vf.createIRI(e.get("firstAuthor"));	×
255
256	// TODO Move this user name extraction to a helper method:
257	String username;
258	if (User.getName(firstAuthorIri) != null) {	×
259	username = User.getShortDisplayName(firstAuthorIri);	×
260	} else {
261	try {
262	Nanopub np = Utils.getAsNanopub(e.get("np"));	×
263	username = Utils.getFoafNameMap(np).get(e.get("firstAuthor"));	×
264	} catch (Exception ex) {	×
265	logger.error("Error getting FOAF name for {} in {}", e.get("firstAuthor"), e.get("np"), ex);	×
266	username = User.getShortDisplayName(firstAuthorIri);	×
267	}	×
268	}
269
270	item.add(new Label("acceptednote", "by " + username + " on " + e.get("date").substring(0, 10)));	×
271	}	×
272
273	});
274
275	c.add(new AjaxLink<>("allaccepted") {	×
276
277	@Override
278	public void onClick(AjaxRequestTarget target) {
279	try {
280	listData.clear();	×
281	listData.addAll(fullList);	×
282	target.add(c);	×
283	setVisible(false);	×
284	target.add(this);	×
285	} catch (Exception ex) {	×
286	logger.error("Error showing all accepted", ex);	×
287	}	×
288	}	×
289
290	}.setVisible(fullList.size() > 10));	×
291
292	} catch (Exception ex) {	×
293	logger.error("Error in accepted section", ex);	×
294	}	×
295	}
296
297	if (getConfig().getGeneralReactionsApiCall() != null) {	×
298	try {
299	final WebMarkupContainer c = new WebMarkupContainer("reactions-component");	×
300	c.setOutputMarkupId(true);	×
301	add(c);	×
302
303	QueryRef queryRef = new QueryRef(getConfig().getGeneralReactionsApiCall());	×
304	ApiResponse resp = ApiCache.retrieveResponse(queryRef);	×
305	while (resp == null) {	×
306	// TODO Do this in an AJAX way:
307	try {
308	Thread.sleep(200);	×
309	} catch (InterruptedException ex) {	×
310	logger.error("Thread interrupted", ex);	×
311	}	×
312	resp = ApiCache.retrieveResponse(queryRef);	×
313	}
314
315	final List<ApiResponseEntry> listData = new ArrayList<ApiResponseEntry>();	×
316	final ArrayList<ApiResponseEntry> fullList = new ArrayList<>();	×
317	for (ApiResponseEntry a : resp.getData()) {	×
318	if (listData.size() < 10) listData.add(a);	×
319	// TODO This will become inefficient at some point:
320	fullList.add(a);	×
321	}	×
322
323	c.add(new DataView<ApiResponseEntry>("reactions", new ListDataProvider<ApiResponseEntry>(listData)) {	×
324
325	@Override
326	protected void populateItem(Item<ApiResponseEntry> item) {
327	ApiResponseEntry e = item.getModelObject();	×
328	PageParameters params = new PageParameters().add("journal", journalId).add("id", e.get("ref_np")).add("mode", "candidate");	×
329	BookmarkablePageLink<Void> l = new BookmarkablePageLink<Void>("reactionlink", GenNanopubPage.class, params);	×
330	l.add(new Label("reactionlinktext", "\"" + e.get("comment") + "\""));	×
331	item.add(l);	×
332	String pubkeyhash = Utils.createSha256HexHash(e.get("pubkey"));	×
333	String username = User.getShortDisplayNameForPubkeyhash(null, pubkeyhash);	×
334	item.add(new Label("reactionnote", "by " + username + " on " + e.get("date").substring(0, 10)));	×
335	}	×
336
337	});
338
339	c.add(new AjaxLink<>("allreactions") {	×
340
341	@Override
342	public void onClick(AjaxRequestTarget target) {
343	try {
344	listData.clear();	×
345	listData.addAll(fullList);	×
346	target.add(c);	×
347	setVisible(false);	×
348	target.add(this);	×
349	} catch (Exception ex) {	×
350	logger.error("Error showing all reactions", ex);	×
351	}	×
352	}	×
353
354	}.setVisible(fullList.size() > 10));	×
355
356	} catch (Exception ex) {	×
357	logger.error("Error in reactions section", ex);	×
358	}	×
359	}
360
361	add(new Label("pagetitle", config.getJournalName() + " \| nanodash"));	×
362	add(new Label("journal-name-title", config.getJournalName()));	×
363	add(new ExternalLink("journal-link", config.getJournalUrl(), config.getJournalName()));	×
364	add(new Label("extra-instructions", config.getExtraInstructions()).setEscapeModelStrings(false));	×
365
366	if (getConfig().getGeneralReactionsApiCall() == null) {	×
367	// TODO Fix this in OverviewPage code once refactoring is finished:
368	add(new Label("reactions-component").setVisible(false));	×
369	}
370	add(new ExternalLink("support-link", "mailto:contact-project+knowledgepixels-support-desk@incoming.gitlab.com?subject=[" + config.getJournalAbbrev() + "%20general]%20my%20problem/question&body=type%20your%20problem/question%20here"));	×
371	}	×
372
373	/**
374	* {@inheritDoc}
375	*/
376	@Override
377	public String getMountPath() {
378	return MOUNT_PATH;	×
379	}
380
381	}

knowledgepixels / nanodash / 17852532121

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