17837235071

Committed 18 Sep 2025 05:58PM UTC coverage: 13.87%. Remained the same

Build # 17837235071

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push

github

Committed by

tkuhn

Commit Message

chore: Remove serialVersionUIDs

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src/main/java/com/knowledgepixels/nanodash/component/ReadonlyItem.java

package com.knowledgepixels.nanodash.component;

import com.knowledgepixels.nanodash.LocalUri;
import com.knowledgepixels.nanodash.RestrictedChoice;
import com.knowledgepixels.nanodash.User;
import com.knowledgepixels.nanodash.Utils;
import com.knowledgepixels.nanodash.component.StatementItem.RepetitionGroup;
import com.knowledgepixels.nanodash.page.ExplorePage;
import com.knowledgepixels.nanodash.page.UserPage;
import com.knowledgepixels.nanodash.template.ContextType;
import com.knowledgepixels.nanodash.template.Template;
import com.knowledgepixels.nanodash.template.TemplateContext;
import com.knowledgepixels.nanodash.template.UnificationException;
import net.trustyuri.TrustyUriUtils;
import org.apache.commons.codec.Charsets;
import org.apache.wicket.behavior.AttributeAppender;
import org.apache.wicket.markup.html.basic.Label;
import org.apache.wicket.markup.html.link.ExternalLink;
import org.apache.wicket.markup.html.panel.Panel;
import org.apache.wicket.model.IModel;
import org.apache.wicket.model.Model;
import org.apache.wicket.validation.IValidatable;
import org.apache.wicket.validation.IValidator;
import org.apache.wicket.validation.Validatable;
import org.apache.wicket.validation.ValidationError;
import org.eclipse.rdf4j.common.net.ParsedIRI;
import org.eclipse.rdf4j.model.IRI;
import org.eclipse.rdf4j.model.Literal;
import org.eclipse.rdf4j.model.Value;
import org.eclipse.rdf4j.model.ValueFactory;
import org.eclipse.rdf4j.model.impl.SimpleValueFactory;
import org.eclipse.rdf4j.model.util.Literals;
import org.eclipse.rdf4j.model.vocabulary.XSD;
import org.nanopub.Nanopub;
import org.nanopub.SimpleCreatorPattern;
import org.nanopub.vocabulary.NTEMPLATE;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

import java.net.URISyntaxException;
import java.net.URLEncoder;
import java.util.HashMap;
import java.util.Map;

/**
 * ReadonlyItem is a component that displays a read-only item in the form.
 */
public class ReadonlyItem extends Panel implements ContextComponent {

    // TODO: Make ContextComponent an abstract class with superclass Panel, and move the common code of the form items there.

    private static final int LONG_LITERAL_LENGTH = 100;
    private static final Logger logger = LoggerFactory.getLogger(ReadonlyItem.class);
    private static final ValueFactory vf = SimpleValueFactory.getInstance();

    private IModel<String> model;
    private TemplateContext context;
    private String prefix;
    private ExternalLink linkComp;
    private Label extraComp, languageComp, datatypeComp;
    private IModel<String> extraModel, languageModel, datatypeModel;
    private IRI iri;
    private RestrictedChoice restrictedChoice;
    private Label showMoreLabelLiteral, showMoreLabelHTML;
    private final Template template;

    /**
     * Constructor for ReadonlyItem.
     *
     * @param id              the component id
     * @param parentId        the parent id (e.g., "subj", "obj")
     * @param iriP            the IRI of the item
     * @param objectPosition  whether this is an object position
     * @param statementPartId the statement part ID
     * @param rg              the repetition group
     */
    public ReadonlyItem(String id, String parentId, final IRI iriP, boolean objectPosition, IRI statementPartId, final RepetitionGroup rg) {
        super(id);
        context = rg.getContext();
        this.iri = iriP;
        template = context.getTemplate();
        model = context.getComponentModels().get(iri);
        if (model == null) {
            model = Model.of("");
            context.getComponentModels().put(iri, model);
        }
        String postfix = Utils.getUriPostfix(iri);
        if (context.hasParam(postfix)) {
            model.setObject(context.getParam(postfix));
        }

        final Map<String, String> foafNameMap;
        if (context.getExistingNanopub() == null) {
            foafNameMap = new HashMap<>();
        } else {
            foafNameMap = Utils.getFoafNameMap(context.getExistingNanopub());
        }

        prefix = template.getPrefix(iri);
        if (prefix == null) prefix = "";
        if (template.isRestrictedChoicePlaceholder(iri)) {
            restrictedChoice = new RestrictedChoice(iri, context);
        }
        add(new Label("prefix", new Model<String>() {

            @Override
            public String getObject() {
                String prefixLabel = template.getPrefixLabel(iri);
                String v = getFullValue();
                if (prefixLabel == null || User.isUser(v) || foafNameMap.containsKey(v)) {
                    return "";
                } else {
                    if (!prefixLabel.isEmpty() && parentId.equals("subj") && !prefixLabel.matches("https?://.*")) {
                        // Capitalize first letter of label if at subject position:
                        prefixLabel = prefixLabel.substring(0, 1).toUpperCase() + prefixLabel.substring(1);
                    }
                    return prefixLabel;
                }
            }

        }));

        linkComp = new ExternalLink("link", new Model<String>() {

            @Override
            public String getObject() {
                String obj = getFullValue();
                if (obj == null) return "";
                if (obj.equals(LocalUri.PREFIX + "nanopub")) {
                    if (context.getExistingNanopub() != null) {
                        obj = context.getExistingNanopub().getUri().stringValue();
                        return ExplorePage.MOUNT_PATH + "?id=" + URLEncoder.encode(obj, Charsets.UTF_8);
                    } else {
                        return "";
                    }
                } else if (obj.equals(LocalUri.PREFIX + "assertion")) {
                    if (context.getExistingNanopub() != null) {
                        obj = context.getExistingNanopub().getAssertionUri().stringValue();
                        return ExplorePage.MOUNT_PATH + "?id=" + URLEncoder.encode(obj, Charsets.UTF_8);
                    } else {
                        return "";
                    }
                } else if (User.isUser(obj)) {
                    return UserPage.MOUNT_PATH + "?id=" + URLEncoder.encode(obj, Charsets.UTF_8);
                } else if (obj.matches("https?://.+")) {
                    return ExplorePage.MOUNT_PATH + "?id=" + URLEncoder.encode(obj, Charsets.UTF_8);
                } else {
                    return "";
                }
            }

        }, new Model<String>() {

            @Override
            public String getObject() {
                String obj = getFullValue();
                if (obj != null && obj.matches("https?://.+")) {
                    IRI objIri = vf.createIRI(obj);
                    if (iri.equals(NTEMPLATE.CREATOR_PLACEHOLDER)) {
                        if (objectPosition) {
                            return "me (" + User.getShortDisplayName(objIri) + ")";
                        } else {
                            return "I (" + User.getShortDisplayName(objIri) + ")";
                        }
                    } else if (isAssertionValue(objIri)) {
                        if (context.getType() == ContextType.ASSERTION) {
                            return "this assertion";
                        } else {
                            return "the assertion above";
                        }
                    } else if (isNanopubValue(objIri)) {
                        return "this nanopublication";
                    } else if (User.isUser(obj)) {
                        return User.getShortDisplayName(objIri);
                    } else if (foafNameMap.containsKey(obj)) {
                        return foafNameMap.get(obj);
                    }
                    return getLabelString(objIri);
                }
                return obj;
            }

        });
        if (template.isIntroducedResource(iri) || template.isEmbeddedResource(iri)) {
            linkComp.add(AttributeAppender.append("class", "introduced"));
        }
        add(linkComp);
        add(new Label("description", new Model<String>() {

            @Override
            public String getObject() {
                String obj = getFullValue();
                if (obj != null && obj.matches("https?://.+")) {
                    IRI objIri = vf.createIRI(obj);
                    if (isAssertionValue(objIri)) {
                        return "This is the identifier for the assertion of this nanopublication.";
                    } else if (isNanopubValue(objIri)) {
                        return "This is the identifier for this whole nanopublication.";
                    } else if (context.isReadOnly() && obj.startsWith(context.getExistingNanopub().getUri().stringValue())) {
                        return "This is a local identifier minted within the nanopublication.";
                    }
                    String labelString = getLabelString(objIri);
                    String description = "";
                    if (labelString.contains(" - ")) description = labelString.replaceFirst("^.* - ", "");
                    return description;
                } else if (obj != null && obj.startsWith("\"")) {
                    return "(this is a literal)";
                }
                return "";
            }

        }));
        Model<String> uriModel = new Model<String>() {

            @Override
            public String getObject() {
                String obj = getFullValue();
                if (obj != null && obj.startsWith("\"")) return "";
                if (isAssertionValue(obj)) {
                    return getAssertionValue();
                } else if (isNanopubValue(obj)) {
                    return getNanopubValue();
                }
                return obj;
            }

        };
        add(Utils.getUriLink("uri", uriModel));
        extraModel = Model.of("");
        extraComp = new Label("extra", extraModel);
        extraComp.setVisible(false);
        add(extraComp);
        languageModel = Model.of("");
        languageComp = new Label("language", languageModel);
        languageComp.setVisible(false);
        add(languageComp);
        datatypeModel = Model.of("");
        datatypeComp = new Label("datatype", datatypeModel);
        datatypeComp.setVisible(false);
        add(datatypeComp);

        showMoreLabelLiteral = new Label("show-more-literal", "");
        add(showMoreLabelLiteral);
        showMoreLabelLiteral.setVisible(false);

        showMoreLabelHTML = new Label("show-more-html", "");
        add(showMoreLabelHTML);
        showMoreLabelHTML.setVisible(false);
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public void fillFinished() {
        String obj = getFullValue();
        if (obj != null) {
            if (isAssertionValue(obj)) {
                linkComp.add(new AttributeAppender("class", "this-assertion"));
            } else if (isNanopubValue(obj)) {
                linkComp.add(new AttributeAppender("class", "this-nanopub"));
            } else if (context.getExistingNanopub() != null) {
                Nanopub np = context.getExistingNanopub();
                if (Utils.getIntroducedIriIds(np).contains(obj) || Utils.getEmbeddedIriIds(np).contains(obj)) {
                    linkComp.add(AttributeAppender.append("class", "introduced"));
                }
            }
        }
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public void finalizeValues() {
    }

    private String getLabelString(IRI iri) {
        if (template.getLabel(iri) != null) {
            return template.getLabel(iri).replaceFirst(" - .*$", "");
        } else if (context.getLabel(iri) != null) {
            return context.getLabel(iri).replaceFirst(" - .*$", "");
        } else {
            return IriItem.getShortNameFromURI(iri.stringValue());
        }
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public void removeFromContext() {
        // Nothing to be done here.
    }

    private String getFullValue() {
        String s = model.getObject();
        if (s == null) return null;
        if (template.isAutoEscapePlaceholder(iri)) {
            s = Utils.urlEncode(s);
        }
        if (!prefix.isEmpty()) {
            s = prefix + s;
        }
        return s;
    }

    private boolean isNanopubValue(Object obj) {
        if (obj == null) return false;
        if (obj.toString().equals(LocalUri.PREFIX + "nanopub")) return true;
        if (context.getExistingNanopub() == null) return false;
        return obj.toString().equals(context.getExistingNanopub().getUri().stringValue());
    }

    private String getNanopubValue() {
        if (context.getExistingNanopub() != null) {
            return context.getExistingNanopub().getUri().stringValue();
        } else {
            return LocalUri.PREFIX + "nanopub";
        }
    }

    private boolean isAssertionValue(Object obj) {
        if (obj == null) return false;
        if (obj.toString().equals(LocalUri.PREFIX + "assertion")) return true;
        if (context.getExistingNanopub() == null) return false;
        return obj.toString().equals(context.getExistingNanopub().getAssertionUri().stringValue());
    }

    private String getAssertionValue() {
        if (context.getExistingNanopub() != null) {
            return context.getExistingNanopub().getAssertionUri().stringValue();
        } else {
            return LocalUri.PREFIX + "assertion";
        }
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public boolean isUnifiableWith(Value v) {
        if (v == null) return true;
        if (v instanceof IRI) {
            String vs = v.stringValue();
            if (vs.equals(LocalUri.PREFIX + "nanopub")) {
                vs = getNanopubValue();
            } else if (vs.equals(LocalUri.PREFIX + "assertion")) {
                vs = getAssertionValue();
            }
            if (vs.startsWith(prefix)) vs = vs.substring(prefix.length());
//                        if (Utils.isLocalURI(vs)) vs = vs.replaceFirst("^" + LocalUri.PREFIX, "");
            if (template.isAutoEscapePlaceholder(iri)) {
                vs = Utils.urlDecode(vs);
            }
            Validatable<String> validatable = new Validatable<>(vs);
//                        if (template.isLocalResource(iri) && !Utils.isUriPostfix(vs)) {
//                                vs = Utils.getUriPostfix(vs);
//                        }
            new Validator().validate(validatable);
            if (!validatable.isValid()) {
                return false;
            }
            if (model.getObject().isEmpty()) {
                return true;
            }
            return vs.equals(model.getObject());
        } else if (v instanceof Literal vL) {
            if (template.getRegex(iri) != null && !v.stringValue().matches(template.getRegex(iri))) {
                return false;
            }
            String languagetag = template.getLanguageTag(iri);
            IRI datatype = template.getDatatype(iri);
            if (languagetag != null) {
                if (vL.getLanguage().isEmpty() || !Literals.normalizeLanguageTag(vL.getLanguage().get()).equals(languagetag)) {
                    return false;
                }
            } else if (datatype != null) {
                if (!vL.getDatatype().equals(datatype)) {
                    return false;
                }
            }
            if (linkComp.getDefaultModelObject() == null || linkComp.getDefaultModelObject().toString().isEmpty()) {
                return true;
            }
            return linkComp.getDefaultModelObject().equals("\"" + v.stringValue() + "\"");
        }
        return false;
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public void unifyWith(Value v) throws UnificationException {
        if (v == null) return;
        String vs = v.stringValue();
        if (!isUnifiableWith(v)) {
            logger.error("Cannot unify {}", v);
            throw new UnificationException(vs);
        }
        if (v instanceof IRI) {
            if (vs.equals(LocalUri.PREFIX + "nanopub")) {
                vs = getNanopubValue();
            } else if (vs.equals(LocalUri.PREFIX + "assertion")) {
                vs = getAssertionValue();
            }
            if (!prefix.isEmpty() && vs.startsWith(prefix)) {
                vs = vs.substring(prefix.length());
                // With read-only items, we don't need preliminary local identifiers:
//                        } else if (Utils.isLocalURI(vs)) {
//                                vs = vs.replaceFirst("^" + LocalUri.PREFIX, "");
//                        } else if (template.isLocalResource(iri) && !Utils.isUriPostfix(vs)) {
//                                vs = Utils.getUriPostfix(vs);
            }
            if (template.isAutoEscapePlaceholder(iri)) {
                vs = Utils.urlDecode(vs);
            }
            model.setObject(vs);
        } else if (v instanceof Literal vL) {
            if (vs.length() >= LONG_LITERAL_LENGTH) {
                linkComp.add(AttributeAppender.append("class", "long-literal collapsed"));
                showMoreLabelLiteral.setVisible(true);
            }
            if (vL.getLanguage().isPresent()) {
                model.setObject("\"" + vs + "\"");
                languageModel.setObject("(" + Literals.normalizeLanguageTag(vL.getLanguage().get()) + ")");
                languageComp.setVisible(true);
            } else if (!vL.getDatatype().equals(XSD.STRING)) {
                model.setObject("\"" + vs + "\"");
                datatypeModel.setObject("(" + vL.getDatatype().stringValue().replace(XSD.NAMESPACE, "xsd:") + ")");
                datatypeComp.setVisible(true);
            } else {
                model.setObject("\"" + vs + "\"");
            }
            // TODO Didn't manage to encode this into a working regex:
            if (vs.startsWith("<p>") || vs.startsWith("<p ") || vs.startsWith("<div>") || vs.startsWith("<div ") || vs.startsWith("<span>") || vs.startsWith("<span ") || vs.startsWith("<img ")) {
                linkComp.setVisible(false);
                extraModel.setObject(Utils.sanitizeHtml(vs));
                extraComp.setEscapeModelStrings(false);
                extraComp.setVisible(true);
                showMoreLabelLiteral.setVisible(false);
                showMoreLabelHTML.setVisible(true);
            }
        }
    }

    protected class Validator extends InvalidityHighlighting implements IValidator<String> {

        /**
         * Default constructor for Validator.
         */
        public Validator() {
        }

        @Override
        public void validate(IValidatable<String> s) {
            String sv = s.getValue();
            String p = prefix;
            if (template.isAutoEscapePlaceholder(iri)) {
                sv = Utils.urlEncode(sv);
            }
            if (sv.matches("https?://.+")) {
                p = "";
            } else if (sv.contains(":")) {
                s.error(new ValidationError("Colon character is not allowed in postfix"));
            }
            String iriString = p + sv;
            if (iriString.matches("[^:# ]+")) {
                p = LocalUri.PREFIX;
                iriString = p + sv;
            }
            try {
                ParsedIRI piri = new ParsedIRI(iriString);
                if (!piri.isAbsolute()) {
                    s.error(new ValidationError("IRI not well-formed"));
                }
                if (p.isEmpty() && !Utils.isLocalURI(sv) && !sv.matches("https?://.+")) {
                    s.error(new ValidationError("Only http(s):// IRIs are allowed here"));
                }
            } catch (URISyntaxException ex) {
                s.error(new ValidationError("IRI not well-formed"));
            }
            String regex = template.getRegex(iri);
            if (regex != null) {
                if (!sv.matches(regex)) {
                    s.error(new ValidationError("Value '" + sv + "' doesn't match the pattern '" + regex + "'"));
                }
            }
            if (template.isRestrictedChoicePlaceholder(iri)) {
                if (!restrictedChoice.getPossibleValues().contains(iriString) && !restrictedChoice.hasPossibleRefValues()) {
                    // not checking the possible ref values can overgenerate, but normally works
                    s.error(new ValidationError("Invalid choice"));
                }
            }
            if (template.isExternalUriPlaceholder(iri)) {
                if (!iriString.matches("https?://.+")) {
                    s.error(new ValidationError("Not an external IRI"));
                }
            }
            if (template.isTrustyUriPlaceholder(iri)) {
                if (!TrustyUriUtils.isPotentialTrustyUri(iriString)) {
                    s.error(new ValidationError("Not a trusty URI"));
                }
            }
            if (iri.equals(NTEMPLATE.CREATOR_PLACEHOLDER) && context.getExistingNanopub() != null) {
                boolean found = false;
                for (IRI creator : SimpleCreatorPattern.getCreators(context.getExistingNanopub())) {
                    if (creator.stringValue().equals(iriString)) {
                        found = true;
                        break;
                    }
                }
                if (!found) {
                    s.error(new ValidationError("Not a creator of nanopub"));
                }
            }
        }

    }

    /**
     * <p>toString.</p>
     *
     * @return a {@link java.lang.String} object
     */
    public String toString() {
        return "[read-only IRI item: " + iri + "]";
    }

}

1	package com.knowledgepixels.nanodash.component;
2
3	import com.knowledgepixels.nanodash.LocalUri;
4	import com.knowledgepixels.nanodash.RestrictedChoice;
5	import com.knowledgepixels.nanodash.User;
6	import com.knowledgepixels.nanodash.Utils;
7	import com.knowledgepixels.nanodash.component.StatementItem.RepetitionGroup;
8	import com.knowledgepixels.nanodash.page.ExplorePage;
9	import com.knowledgepixels.nanodash.page.UserPage;
10	import com.knowledgepixels.nanodash.template.ContextType;
11	import com.knowledgepixels.nanodash.template.Template;
12	import com.knowledgepixels.nanodash.template.TemplateContext;
13	import com.knowledgepixels.nanodash.template.UnificationException;
14	import net.trustyuri.TrustyUriUtils;
15	import org.apache.commons.codec.Charsets;
16	import org.apache.wicket.behavior.AttributeAppender;
17	import org.apache.wicket.markup.html.basic.Label;
18	import org.apache.wicket.markup.html.link.ExternalLink;
19	import org.apache.wicket.markup.html.panel.Panel;
20	import org.apache.wicket.model.IModel;
21	import org.apache.wicket.model.Model;
22	import org.apache.wicket.validation.IValidatable;
23	import org.apache.wicket.validation.IValidator;
24	import org.apache.wicket.validation.Validatable;
25	import org.apache.wicket.validation.ValidationError;
26	import org.eclipse.rdf4j.common.net.ParsedIRI;
27	import org.eclipse.rdf4j.model.IRI;
28	import org.eclipse.rdf4j.model.Literal;
29	import org.eclipse.rdf4j.model.Value;
30	import org.eclipse.rdf4j.model.ValueFactory;
31	import org.eclipse.rdf4j.model.impl.SimpleValueFactory;
32	import org.eclipse.rdf4j.model.util.Literals;
33	import org.eclipse.rdf4j.model.vocabulary.XSD;
34	import org.nanopub.Nanopub;
35	import org.nanopub.SimpleCreatorPattern;
36	import org.nanopub.vocabulary.NTEMPLATE;
37	import org.slf4j.Logger;
38	import org.slf4j.LoggerFactory;
39
40	import java.net.URISyntaxException;
41	import java.net.URLEncoder;
42	import java.util.HashMap;
43	import java.util.Map;
44
45	/**
46	* ReadonlyItem is a component that displays a read-only item in the form.
47	*/
48	public class ReadonlyItem extends Panel implements ContextComponent {
49
50	// TODO: Make ContextComponent an abstract class with superclass Panel, and move the common code of the form items there.
51
52	private static final int LONG_LITERAL_LENGTH = 100;
53	private static final Logger logger = LoggerFactory.getLogger(ReadonlyItem.class);	×
54	private static final ValueFactory vf = SimpleValueFactory.getInstance();	×
55
56	private IModel<String> model;
57	private TemplateContext context;
58	private String prefix;
59	private ExternalLink linkComp;
60	private Label extraComp, languageComp, datatypeComp;
61	private IModel<String> extraModel, languageModel, datatypeModel;
62	private IRI iri;
63	private RestrictedChoice restrictedChoice;
64	private Label showMoreLabelLiteral, showMoreLabelHTML;
65	private final Template template;
66
67	/**
68	* Constructor for ReadonlyItem.
69	*
70	* @param id the component id
71	* @param parentId the parent id (e.g., "subj", "obj")
72	* @param iriP the IRI of the item
73	* @param objectPosition whether this is an object position
74	* @param statementPartId the statement part ID
75	* @param rg the repetition group
76	*/
77	public ReadonlyItem(String id, String parentId, final IRI iriP, boolean objectPosition, IRI statementPartId, final RepetitionGroup rg) {
78	super(id);	×
79	context = rg.getContext();	×
80	this.iri = iriP;	×
81	template = context.getTemplate();	×
82	model = context.getComponentModels().get(iri);	×
83	if (model == null) {	×
84	model = Model.of("");	×
85	context.getComponentModels().put(iri, model);	×
86	}
87	String postfix = Utils.getUriPostfix(iri);	×
88	if (context.hasParam(postfix)) {	×
89	model.setObject(context.getParam(postfix));	×
90	}
91
92	final Map<String, String> foafNameMap;
93	if (context.getExistingNanopub() == null) {	×
94	foafNameMap = new HashMap<>();	×
95	} else {
96	foafNameMap = Utils.getFoafNameMap(context.getExistingNanopub());	×
97	}
98
99	prefix = template.getPrefix(iri);	×
100	if (prefix == null) prefix = "";	×
101	if (template.isRestrictedChoicePlaceholder(iri)) {	×
102	restrictedChoice = new RestrictedChoice(iri, context);	×
103	}
104	add(new Label("prefix", new Model<String>() {	×
105
106	@Override
107	public String getObject() {
108	String prefixLabel = template.getPrefixLabel(iri);	×
109	String v = getFullValue();	×
110	if (prefixLabel == null \|\| User.isUser(v) \|\| foafNameMap.containsKey(v)) {	×
111	return "";	×
112	} else {
113	if (!prefixLabel.isEmpty() && parentId.equals("subj") && !prefixLabel.matches("https?://.*")) {	×
114	// Capitalize first letter of label if at subject position:
115	prefixLabel = prefixLabel.substring(0, 1).toUpperCase() + prefixLabel.substring(1);	×
116	}
117	return prefixLabel;	×
118	}
119	}
120
121	}));
122
123	linkComp = new ExternalLink("link", new Model<String>() {	×
124
125	@Override
126	public String getObject() {
127	String obj = getFullValue();	×
128	if (obj == null) return "";	×
129	if (obj.equals(LocalUri.PREFIX + "nanopub")) {	×
130	if (context.getExistingNanopub() != null) {	×
131	obj = context.getExistingNanopub().getUri().stringValue();	×
132	return ExplorePage.MOUNT_PATH + "?id=" + URLEncoder.encode(obj, Charsets.UTF_8);	×
133	} else {
134	return "";	×
135	}
136	} else if (obj.equals(LocalUri.PREFIX + "assertion")) {	×
137	if (context.getExistingNanopub() != null) {	×
138	obj = context.getExistingNanopub().getAssertionUri().stringValue();	×
139	return ExplorePage.MOUNT_PATH + "?id=" + URLEncoder.encode(obj, Charsets.UTF_8);	×
140	} else {
141	return "";	×
142	}
143	} else if (User.isUser(obj)) {	×
144	return UserPage.MOUNT_PATH + "?id=" + URLEncoder.encode(obj, Charsets.UTF_8);	×
145	} else if (obj.matches("https?://.+")) {	×
146	return ExplorePage.MOUNT_PATH + "?id=" + URLEncoder.encode(obj, Charsets.UTF_8);	×
147	} else {
148	return "";	×
149	}
150	}
151
152	}, new Model<String>() {	×
153
154	@Override
155	public String getObject() {
156	String obj = getFullValue();	×
157	if (obj != null && obj.matches("https?://.+")) {	×
158	IRI objIri = vf.createIRI(obj);	×
159	if (iri.equals(NTEMPLATE.CREATOR_PLACEHOLDER)) {	×
160	if (objectPosition) {	×
161	return "me (" + User.getShortDisplayName(objIri) + ")";	×
162	} else {
163	return "I (" + User.getShortDisplayName(objIri) + ")";	×
164	}
165	} else if (isAssertionValue(objIri)) {	×
166	if (context.getType() == ContextType.ASSERTION) {	×
167	return "this assertion";	×
168	} else {
169	return "the assertion above";	×
170	}
171	} else if (isNanopubValue(objIri)) {	×
172	return "this nanopublication";	×
173	} else if (User.isUser(obj)) {	×
174	return User.getShortDisplayName(objIri);	×
175	} else if (foafNameMap.containsKey(obj)) {	×
176	return foafNameMap.get(obj);	×
177	}
178	return getLabelString(objIri);	×
179	}
180	return obj;	×
181	}
182
183	});
184	if (template.isIntroducedResource(iri) \|\| template.isEmbeddedResource(iri)) {	×
185	linkComp.add(AttributeAppender.append("class", "introduced"));	×
186	}
187	add(linkComp);	×
188	add(new Label("description", new Model<String>() {	×
189
190	@Override
191	public String getObject() {
192	String obj = getFullValue();	×
193	if (obj != null && obj.matches("https?://.+")) {	×
194	IRI objIri = vf.createIRI(obj);	×
195	if (isAssertionValue(objIri)) {	×
196	return "This is the identifier for the assertion of this nanopublication.";	×
197	} else if (isNanopubValue(objIri)) {	×
198	return "This is the identifier for this whole nanopublication.";	×
199	} else if (context.isReadOnly() && obj.startsWith(context.getExistingNanopub().getUri().stringValue())) {	×
200	return "This is a local identifier minted within the nanopublication.";	×
201	}
202	String labelString = getLabelString(objIri);	×
203	String description = "";	×
204	if (labelString.contains(" - ")) description = labelString.replaceFirst("^.* - ", "");	×
205	return description;	×
206	} else if (obj != null && obj.startsWith("\"")) {	×
207	return "(this is a literal)";	×
208	}
209	return "";	×
210	}
211
212	}));
213	Model<String> uriModel = new Model<String>() {	×
214
215	@Override
216	public String getObject() {
217	String obj = getFullValue();	×
218	if (obj != null && obj.startsWith("\"")) return "";	×
219	if (isAssertionValue(obj)) {	×
220	return getAssertionValue();	×
221	} else if (isNanopubValue(obj)) {	×
222	return getNanopubValue();	×
223	}
224	return obj;	×
225	}
226
227	};
228	add(Utils.getUriLink("uri", uriModel));	×
229	extraModel = Model.of("");	×
230	extraComp = new Label("extra", extraModel);	×
231	extraComp.setVisible(false);	×
232	add(extraComp);	×
233	languageModel = Model.of("");	×
234	languageComp = new Label("language", languageModel);	×
235	languageComp.setVisible(false);	×
236	add(languageComp);	×
237	datatypeModel = Model.of("");	×
238	datatypeComp = new Label("datatype", datatypeModel);	×
239	datatypeComp.setVisible(false);	×
240	add(datatypeComp);	×
241
242	showMoreLabelLiteral = new Label("show-more-literal", "");	×
243	add(showMoreLabelLiteral);	×
244	showMoreLabelLiteral.setVisible(false);	×
245
246	showMoreLabelHTML = new Label("show-more-html", "");	×
247	add(showMoreLabelHTML);	×
248	showMoreLabelHTML.setVisible(false);	×
249	}	×
250
251	/**
252	* {@inheritDoc}
253	*/
254	@Override
255	public void fillFinished() {
256	String obj = getFullValue();	×
257	if (obj != null) {	×
258	if (isAssertionValue(obj)) {	×
259	linkComp.add(new AttributeAppender("class", "this-assertion"));	×
260	} else if (isNanopubValue(obj)) {	×
261	linkComp.add(new AttributeAppender("class", "this-nanopub"));	×
262	} else if (context.getExistingNanopub() != null) {	×
263	Nanopub np = context.getExistingNanopub();	×
264	if (Utils.getIntroducedIriIds(np).contains(obj) \|\| Utils.getEmbeddedIriIds(np).contains(obj)) {	×
265	linkComp.add(AttributeAppender.append("class", "introduced"));	×
266	}
267	}
268	}
269	}	×
270
271	/**
272	* {@inheritDoc}
273	*/
274	@Override
275	public void finalizeValues() {
276	}	×
277
278	private String getLabelString(IRI iri) {
279	if (template.getLabel(iri) != null) {	×
280	return template.getLabel(iri).replaceFirst(" - .*$", "");	×
281	} else if (context.getLabel(iri) != null) {	×
282	return context.getLabel(iri).replaceFirst(" - .*$", "");	×
283	} else {
284	return IriItem.getShortNameFromURI(iri.stringValue());	×
285	}
286	}
287
288	/**
289	* {@inheritDoc}
290	*/
291	@Override
292	public void removeFromContext() {
293	// Nothing to be done here.
294	}	×
295
296	private String getFullValue() {
297	String s = model.getObject();	×
298	if (s == null) return null;	×
299	if (template.isAutoEscapePlaceholder(iri)) {	×
300	s = Utils.urlEncode(s);	×
301	}
302	if (!prefix.isEmpty()) {	×
303	s = prefix + s;	×
304	}
305	return s;	×
306	}
307
308	private boolean isNanopubValue(Object obj) {
309	if (obj == null) return false;	×
310	if (obj.toString().equals(LocalUri.PREFIX + "nanopub")) return true;	×
311	if (context.getExistingNanopub() == null) return false;	×
312	return obj.toString().equals(context.getExistingNanopub().getUri().stringValue());	×
313	}
314
315	private String getNanopubValue() {
316	if (context.getExistingNanopub() != null) {	×
317	return context.getExistingNanopub().getUri().stringValue();	×
318	} else {
319	return LocalUri.PREFIX + "nanopub";	×
320	}
321	}
322
323	private boolean isAssertionValue(Object obj) {
324	if (obj == null) return false;	×
325	if (obj.toString().equals(LocalUri.PREFIX + "assertion")) return true;	×
326	if (context.getExistingNanopub() == null) return false;	×
327	return obj.toString().equals(context.getExistingNanopub().getAssertionUri().stringValue());	×
328	}
329
330	private String getAssertionValue() {
331	if (context.getExistingNanopub() != null) {	×
332	return context.getExistingNanopub().getAssertionUri().stringValue();	×
333	} else {
334	return LocalUri.PREFIX + "assertion";	×
335	}
336	}
337
338	/**
339	* {@inheritDoc}
340	*/
341	@Override
342	public boolean isUnifiableWith(Value v) {
343	if (v == null) return true;	×
344	if (v instanceof IRI) {	×
345	String vs = v.stringValue();	×
346	if (vs.equals(LocalUri.PREFIX + "nanopub")) {	×
347	vs = getNanopubValue();	×
348	} else if (vs.equals(LocalUri.PREFIX + "assertion")) {	×
349	vs = getAssertionValue();	×
350	}
351	if (vs.startsWith(prefix)) vs = vs.substring(prefix.length());	×
352	// if (Utils.isLocalURI(vs)) vs = vs.replaceFirst("^" + LocalUri.PREFIX, "");
353	if (template.isAutoEscapePlaceholder(iri)) {	×
354	vs = Utils.urlDecode(vs);	×
355	}
356	Validatable<String> validatable = new Validatable<>(vs);	×
357	// if (template.isLocalResource(iri) && !Utils.isUriPostfix(vs)) {
358	// vs = Utils.getUriPostfix(vs);
359	// }
360	new Validator().validate(validatable);	×
361	if (!validatable.isValid()) {	×
362	return false;	×
363	}
364	if (model.getObject().isEmpty()) {	×
365	return true;	×
366	}
367	return vs.equals(model.getObject());	×
368	} else if (v instanceof Literal vL) {	×
369	if (template.getRegex(iri) != null && !v.stringValue().matches(template.getRegex(iri))) {	×
370	return false;	×
371	}
372	String languagetag = template.getLanguageTag(iri);	×
373	IRI datatype = template.getDatatype(iri);	×
374	if (languagetag != null) {	×
375	if (vL.getLanguage().isEmpty() \|\| !Literals.normalizeLanguageTag(vL.getLanguage().get()).equals(languagetag)) {	×
376	return false;	×
377	}
378	} else if (datatype != null) {	×
379	if (!vL.getDatatype().equals(datatype)) {	×
380	return false;	×
381	}
382	}
383	if (linkComp.getDefaultModelObject() == null \|\| linkComp.getDefaultModelObject().toString().isEmpty()) {	×
384	return true;	×
385	}
386	return linkComp.getDefaultModelObject().equals("\"" + v.stringValue() + "\"");	×
387	}
388	return false;	×
389	}
390
391	/**
392	* {@inheritDoc}
393	*/
394	@Override
395	public void unifyWith(Value v) throws UnificationException {
396	if (v == null) return;	×
397	String vs = v.stringValue();	×
398	if (!isUnifiableWith(v)) {	×
399	logger.error("Cannot unify {}", v);	×
400	throw new UnificationException(vs);	×
401	}
402	if (v instanceof IRI) {	×
403	if (vs.equals(LocalUri.PREFIX + "nanopub")) {	×
404	vs = getNanopubValue();	×
405	} else if (vs.equals(LocalUri.PREFIX + "assertion")) {	×
406	vs = getAssertionValue();	×
407	}
408	if (!prefix.isEmpty() && vs.startsWith(prefix)) {	×
409	vs = vs.substring(prefix.length());	×
410	// With read-only items, we don't need preliminary local identifiers:
411	// } else if (Utils.isLocalURI(vs)) {
412	// vs = vs.replaceFirst("^" + LocalUri.PREFIX, "");
413	// } else if (template.isLocalResource(iri) && !Utils.isUriPostfix(vs)) {
414	// vs = Utils.getUriPostfix(vs);
415	}
416	if (template.isAutoEscapePlaceholder(iri)) {	×
417	vs = Utils.urlDecode(vs);	×
418	}
419	model.setObject(vs);	×
420	} else if (v instanceof Literal vL) {	×
421	if (vs.length() >= LONG_LITERAL_LENGTH) {	×
422	linkComp.add(AttributeAppender.append("class", "long-literal collapsed"));	×
423	showMoreLabelLiteral.setVisible(true);	×
424	}
425	if (vL.getLanguage().isPresent()) {	×
426	model.setObject("\"" + vs + "\"");	×
427	languageModel.setObject("(" + Literals.normalizeLanguageTag(vL.getLanguage().get()) + ")");	×
428	languageComp.setVisible(true);	×
429	} else if (!vL.getDatatype().equals(XSD.STRING)) {	×
430	model.setObject("\"" + vs + "\"");	×
431	datatypeModel.setObject("(" + vL.getDatatype().stringValue().replace(XSD.NAMESPACE, "xsd:") + ")");	×
432	datatypeComp.setVisible(true);	×
433	} else {
434	model.setObject("\"" + vs + "\"");	×
435	}
436	// TODO Didn't manage to encode this into a working regex:
437	if (vs.startsWith("<p>") \|\| vs.startsWith("<p ") \|\| vs.startsWith("<div>") \|\| vs.startsWith("<div ") \|\| vs.startsWith("<span>") \|\| vs.startsWith("<span ") \|\| vs.startsWith("<img ")) {	×
438	linkComp.setVisible(false);	×
439	extraModel.setObject(Utils.sanitizeHtml(vs));	×
440	extraComp.setEscapeModelStrings(false);	×
441	extraComp.setVisible(true);	×
442	showMoreLabelLiteral.setVisible(false);	×
443	showMoreLabelHTML.setVisible(true);	×
444	}
445	}
446	}	×
447
448	protected class Validator extends InvalidityHighlighting implements IValidator<String> {
449
450	/**
451	* Default constructor for Validator.
452	*/
453	public Validator() {	×
454	}	×
455
456	@Override
457	public void validate(IValidatable<String> s) {
458	String sv = s.getValue();	×
459	String p = prefix;	×
460	if (template.isAutoEscapePlaceholder(iri)) {	×
461	sv = Utils.urlEncode(sv);	×
462	}
463	if (sv.matches("https?://.+")) {	×
464	p = "";	×
465	} else if (sv.contains(":")) {	×
466	s.error(new ValidationError("Colon character is not allowed in postfix"));	×
467	}
468	String iriString = p + sv;	×
469	if (iriString.matches("[^:# ]+")) {	×
470	p = LocalUri.PREFIX;	×
471	iriString = p + sv;	×
472	}
473	try {
474	ParsedIRI piri = new ParsedIRI(iriString);	×
475	if (!piri.isAbsolute()) {	×
476	s.error(new ValidationError("IRI not well-formed"));	×
477	}
478	if (p.isEmpty() && !Utils.isLocalURI(sv) && !sv.matches("https?://.+")) {	×
479	s.error(new ValidationError("Only http(s):// IRIs are allowed here"));	×
480	}
481	} catch (URISyntaxException ex) {	×
482	s.error(new ValidationError("IRI not well-formed"));	×
483	}	×
484	String regex = template.getRegex(iri);	×
485	if (regex != null) {	×
486	if (!sv.matches(regex)) {	×
487	s.error(new ValidationError("Value '" + sv + "' doesn't match the pattern '" + regex + "'"));	×
488	}
489	}
490	if (template.isRestrictedChoicePlaceholder(iri)) {	×
491	if (!restrictedChoice.getPossibleValues().contains(iriString) && !restrictedChoice.hasPossibleRefValues()) {	×
492	// not checking the possible ref values can overgenerate, but normally works
493	s.error(new ValidationError("Invalid choice"));	×
494	}
495	}
496	if (template.isExternalUriPlaceholder(iri)) {	×
497	if (!iriString.matches("https?://.+")) {	×
498	s.error(new ValidationError("Not an external IRI"));	×
499	}
500	}
501	if (template.isTrustyUriPlaceholder(iri)) {	×
502	if (!TrustyUriUtils.isPotentialTrustyUri(iriString)) {	×
503	s.error(new ValidationError("Not a trusty URI"));	×
504	}
505	}
506	if (iri.equals(NTEMPLATE.CREATOR_PLACEHOLDER) && context.getExistingNanopub() != null) {	×
507	boolean found = false;	×
508	for (IRI creator : SimpleCreatorPattern.getCreators(context.getExistingNanopub())) {	×
509	if (creator.stringValue().equals(iriString)) {	×
510	found = true;	×
511	break;	×
512	}
513	}	×
514	if (!found) {	×
515	s.error(new ValidationError("Not a creator of nanopub"));	×
516	}
517	}
518	}	×
519
520	}
521
522	/**
523	* <p>toString.</p>
524	*
525	* @return a {@link java.lang.String} object
526	*/
527	public String toString() {
528	return "[read-only IRI item: " + iri + "]";	×
529	}
530
531	}

knowledgepixels / nanodash / 17837235071

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