17380144000

Committed 01 Sep 2025 02:12PM UTC coverage: 12.03% (+0.05%) from 11.978%

Build # 17380144000

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push

github

Committed by

ashleycaselli

Commit Message

refactor: replace printStackTrace with logger.error for better error handling

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330 of 3850 branches covered (8.57%)

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0.0

src/main/java/com/knowledgepixels/nanodash/component/IriTextfieldItem.java

package com.knowledgepixels.nanodash.component;

import com.knowledgepixels.nanodash.Utils;
import com.knowledgepixels.nanodash.template.Template;
import com.knowledgepixels.nanodash.template.TemplateContext;
import com.knowledgepixels.nanodash.template.UnificationException;
import net.trustyuri.TrustyUriUtils;
import org.apache.wicket.AttributeModifier;
import org.apache.wicket.Component;
import org.apache.wicket.ajax.AjaxRequestTarget;
import org.apache.wicket.ajax.form.OnChangeAjaxBehavior;
import org.apache.wicket.behavior.AttributeAppender;
import org.apache.wicket.markup.html.basic.Label;
import org.apache.wicket.markup.html.form.TextField;
import org.apache.wicket.markup.html.link.ExternalLink;
import org.apache.wicket.markup.html.panel.Panel;
import org.apache.wicket.model.IModel;
import org.apache.wicket.model.Model;
import org.apache.wicket.validation.IValidatable;
import org.apache.wicket.validation.IValidator;
import org.apache.wicket.validation.Validatable;
import org.apache.wicket.validation.ValidationError;
import org.eclipse.rdf4j.common.net.ParsedIRI;
import org.eclipse.rdf4j.model.IRI;
import org.eclipse.rdf4j.model.Value;
import org.nanopub.SimpleCreatorPattern;
import org.nanopub.vocabulary.NTEMPLATE;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

import java.net.URISyntaxException;

/**
 * A text field for entering IRIs, with a prefix label and validation.
 */
public class IriTextfieldItem extends Panel implements ContextComponent {

    // TODO: Make ContextComponent an abstract class with superclass Panel, and move the common code of the form items there.

    private static final long serialVersionUID = 1L;

    private String prefix;
    private TemplateContext context;
    private TextField<String> textfield;
    private IRI iri;
    private static final Logger logger = LoggerFactory.getLogger(IriTextfieldItem.class);

    /**
     * Constructor for creating an IRI text field item.
     *
     * @param id       the component ID
     * @param parentId the parent ID (e.g., "subj", "pred", "obj")
     * @param iriP     the IRI placeholder for this item
     * @param optional whether the field is optional
     * @param context  the template context containing models and components
     */
    public IriTextfieldItem(String id, String parentId, final IRI iriP, boolean optional, final TemplateContext context) {
        super(id);
        this.context = context;
        this.iri = iriP;
        final Template template = context.getTemplate();
        IModel<String> model = context.getComponentModels().get(iri);
        if (model == null) {
            model = Model.of("");
            context.getComponentModels().put(iri, model);
        }
        String postfix = Utils.getUriPostfix(iri);
        if (context.hasParam(postfix)) {
            model.setObject(context.getParam(postfix));
        }
        prefix = template.getPrefix(iri);
        if (prefix == null) prefix = "";
        if (template.isLocalResource(iri)) {
            prefix = Utils.getUriPrefix(iri);
        }
        String prefixLabel = template.getPrefixLabel(iri);
        Label prefixLabelComp;
        if (prefixLabel == null) {
            prefixLabelComp = new Label("prefix", "");
            prefixLabelComp.setVisible(false);
        } else {
            if (!prefixLabel.isEmpty() && parentId.equals("subj") && !prefixLabel.matches("https?://.*")) {
                // Capitalize first letter of label if at subject position:
                prefixLabel = prefixLabel.substring(0, 1).toUpperCase() + prefixLabel.substring(1);
            }
            prefixLabelComp = new Label("prefix", prefixLabel);
        }
        add(prefixLabelComp);
        String prefixTooltip = prefix;
        if (!prefix.isEmpty()) {
            prefixTooltip += "...";
            if (template.isLocalResource(iri)) {
                prefixTooltip = "local:...";
            }
        }
        add(new ExternalLink("prefixtooltiptext", "", prefixTooltip));
        textfield = new TextField<>("textfield", model);
        if (!optional) textfield.setRequired(true);
        if (template.isLocalResource(iri)) {
            textfield.add(new AttributeAppender("class", " local"));
        }
        textfield.add(new Validator(iri, template, prefix, context));
        context.getComponents().add(textfield);
        if (template.getLabel(iri) != null) {
            textfield.add(new AttributeModifier("placeholder", template.getLabel(iri).replaceFirst(" - .*$", "")));
            textfield.setLabel(Model.of(template.getLabel(iri)));
        }
        textfield.add(new OnChangeAjaxBehavior() {

            private static final long serialVersionUID = 1L;

            @Override
            protected void onUpdate(AjaxRequestTarget target) {
                for (Component c : context.getComponents()) {
                    if (c == textfield) continue;
                    if (c.getDefaultModel() == textfield.getModel()) {
                        c.modelChanged();
                        target.add(c);
                    }
                }
            }

        });
        if (template.isIntroducedResource(iri) || template.isEmbeddedResource(iri)) {
            textfield.add(AttributeAppender.append("class", "introduced"));
        }
        add(textfield);
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public void removeFromContext() {
        context.getComponents().remove(textfield);
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public boolean isUnifiableWith(Value v) {
        if (v == null) return true;
        if (v instanceof IRI) {
            String vs = v.stringValue();
            if (vs.startsWith(prefix)) vs = vs.substring(prefix.length());
            if (vs.startsWith("local:")) vs = vs.replaceFirst("^local:", "");
            if (context.getTemplate().isAutoEscapePlaceholder(iri)) {
                vs = Utils.urlDecode(vs);
            }
            Validatable<String> validatable = new Validatable<>(vs);
            if (context.getTemplate().isLocalResource(iri) && !Utils.isUriPostfix(vs)) {
                vs = Utils.getUriPostfix(vs);
            }
            new Validator(iri, context.getTemplate(), prefix, context).validate(validatable);
            if (!validatable.isValid()) {
                return false;
            }
            if (textfield.getModelObject().isEmpty()) {
                return true;
            }
            return vs.equals(textfield.getModelObject());
        }
        return false;
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public void unifyWith(Value v) throws UnificationException {
        if (v == null) return;
        String vs = v.stringValue();
        if (!isUnifiableWith(v)) throw new UnificationException(vs);
        if (!prefix.isEmpty() && vs.startsWith(prefix)) {
            vs = vs.substring(prefix.length());
        } else if (vs.startsWith("local:")) {
            vs = vs.replaceFirst("^local:", "");
        } else if (context.getTemplate().isLocalResource(iri) && !Utils.isUriPostfix(vs)) {
            vs = Utils.getUriPostfix(vs);
        }
        if (context.getTemplate().isAutoEscapePlaceholder(iri)) {
            vs = Utils.urlDecode(vs);
        }
        textfield.setModelObject(vs);
    }

    /**
     * Validator class for validating IRI text fields.
     */
    protected static class Validator extends InvalidityHighlighting implements IValidator<String> {

        private static final long serialVersionUID = 1L;

        private IRI iri;
        private Template template;
        private String prefix;
        private TemplateContext context;

        /**
         * Constructor for creating a validator for an IRI text field.
         *
         * @param iri      the IRI placeholder for this item
         * @param template the template containing validation rules
         * @param prefix   the prefix to be used in validation
         * @param context  the template context containing models and components
         */
        public Validator(IRI iri, Template template, String prefix, TemplateContext context) {
            this.iri = iri;
            this.template = template;
            this.prefix = prefix;
            this.context = context;
        }

        @Override
        public void validate(IValidatable<String> s) {
            String sv = s.getValue();
            String p = prefix;
            if (template.isAutoEscapePlaceholder(iri)) {
                sv = Utils.urlEncode(sv);
            }
            if (sv.matches("https?://.+")) {
                p = "";
            } else if (sv.contains(":")) {
                s.error(new ValidationError("Colon character is not allowed in postfix"));
            }
            String iriString = p + sv;
            if (iriString.matches("[^:# ]+")) {
                p = "local:";
                iriString = p + sv;
            }
            try {
                ParsedIRI piri = new ParsedIRI(iriString);
                if (!piri.isAbsolute()) {
                    s.error(new ValidationError("IRI not well-formed"));
                }
                if (p.isEmpty() && !sv.startsWith("local:") && !sv.matches("https?://.+")) {
                    s.error(new ValidationError("Only http(s):// IRIs are allowed here"));
                }
            } catch (URISyntaxException ex) {
                s.error(new ValidationError("IRI not well-formed"));
            }
            String regex = template.getRegex(iri);
            if (regex != null) {
                if (!sv.matches(regex)) {
                    s.error(new ValidationError("Value '" + sv + "' doesn't match the pattern '" + regex + "'"));
                }
            }
            if (template.isExternalUriPlaceholder(iri)) {
                if (!iriString.matches("https?://.+")) {
                    s.error(new ValidationError("Not an external IRI"));
                }
            }
            if (template.isTrustyUriPlaceholder(iri)) {
                if (!TrustyUriUtils.isPotentialTrustyUri(iriString)) {
                    s.error(new ValidationError("Not a trusty URI"));
                }
            }
            if (iri.equals(NTEMPLATE.CREATOR_PLACEHOLDER) && context.getExistingNanopub() != null) {
                boolean found = false;
                for (IRI creator : SimpleCreatorPattern.getCreators(context.getExistingNanopub())) {
                    if (creator.stringValue().equals(iriString)) {
                        found = true;
                        break;
                    }
                }
                if (!found) {
                    s.error(new ValidationError("Not a creator of nanopub"));
                }
            }
        }

    }

    /**
     * {@inheritDoc}
     */
    @Override
    public void fillFinished() {
    }

    /**
     * {@inheritDoc}
     */
    @Override
    public void finalizeValues() {
        Value defaultValue = context.getTemplate().getDefault(iri);
        if (isUnifiableWith(defaultValue)) {
            try {
                unifyWith(defaultValue);
            } catch (UnificationException ex) {
                logger.error("Could not unify default value {} with text field {}", defaultValue, this, ex);
            }
        }
    }

    /**
     * <p>toString.</p>
     *
     * @return a {@link java.lang.String} object
     */
    public String toString() {
        return "[IRI textfield item: " + iri + "]";
    }

}

1	package com.knowledgepixels.nanodash.component;
2
3	import com.knowledgepixels.nanodash.Utils;
4	import com.knowledgepixels.nanodash.template.Template;
5	import com.knowledgepixels.nanodash.template.TemplateContext;
6	import com.knowledgepixels.nanodash.template.UnificationException;
7	import net.trustyuri.TrustyUriUtils;
8	import org.apache.wicket.AttributeModifier;
9	import org.apache.wicket.Component;
10	import org.apache.wicket.ajax.AjaxRequestTarget;
11	import org.apache.wicket.ajax.form.OnChangeAjaxBehavior;
12	import org.apache.wicket.behavior.AttributeAppender;
13	import org.apache.wicket.markup.html.basic.Label;
14	import org.apache.wicket.markup.html.form.TextField;
15	import org.apache.wicket.markup.html.link.ExternalLink;
16	import org.apache.wicket.markup.html.panel.Panel;
17	import org.apache.wicket.model.IModel;
18	import org.apache.wicket.model.Model;
19	import org.apache.wicket.validation.IValidatable;
20	import org.apache.wicket.validation.IValidator;
21	import org.apache.wicket.validation.Validatable;
22	import org.apache.wicket.validation.ValidationError;
23	import org.eclipse.rdf4j.common.net.ParsedIRI;
24	import org.eclipse.rdf4j.model.IRI;
25	import org.eclipse.rdf4j.model.Value;
26	import org.nanopub.SimpleCreatorPattern;
27	import org.nanopub.vocabulary.NTEMPLATE;
28	import org.slf4j.Logger;
29	import org.slf4j.LoggerFactory;
30
31	import java.net.URISyntaxException;
32
33	/**
34	* A text field for entering IRIs, with a prefix label and validation.
35	*/
36	public class IriTextfieldItem extends Panel implements ContextComponent {
37
38	// TODO: Make ContextComponent an abstract class with superclass Panel, and move the common code of the form items there.
39
40	private static final long serialVersionUID = 1L;
41
42	private String prefix;
43	private TemplateContext context;
44	private TextField<String> textfield;
45	private IRI iri;
46	private static final Logger logger = LoggerFactory.getLogger(IriTextfieldItem.class);	×
47
48	/**
49	* Constructor for creating an IRI text field item.
50	*
51	* @param id the component ID
52	* @param parentId the parent ID (e.g., "subj", "pred", "obj")
53	* @param iriP the IRI placeholder for this item
54	* @param optional whether the field is optional
55	* @param context the template context containing models and components
56	*/
57	public IriTextfieldItem(String id, String parentId, final IRI iriP, boolean optional, final TemplateContext context) {
58	super(id);	×
59	this.context = context;	×
60	this.iri = iriP;	×
61	final Template template = context.getTemplate();	×
62	IModel<String> model = context.getComponentModels().get(iri);	×
63	if (model == null) {	×
64	model = Model.of("");	×
65	context.getComponentModels().put(iri, model);	×
66	}
67	String postfix = Utils.getUriPostfix(iri);	×
68	if (context.hasParam(postfix)) {	×
69	model.setObject(context.getParam(postfix));	×
70	}
71	prefix = template.getPrefix(iri);	×
72	if (prefix == null) prefix = "";	×
73	if (template.isLocalResource(iri)) {	×
74	prefix = Utils.getUriPrefix(iri);	×
75	}
76	String prefixLabel = template.getPrefixLabel(iri);	×
77	Label prefixLabelComp;
78	if (prefixLabel == null) {	×
79	prefixLabelComp = new Label("prefix", "");	×
80	prefixLabelComp.setVisible(false);	×
81	} else {
82	if (!prefixLabel.isEmpty() && parentId.equals("subj") && !prefixLabel.matches("https?://.*")) {	×
83	// Capitalize first letter of label if at subject position:
84	prefixLabel = prefixLabel.substring(0, 1).toUpperCase() + prefixLabel.substring(1);	×
85	}
86	prefixLabelComp = new Label("prefix", prefixLabel);	×
87	}
88	add(prefixLabelComp);	×
89	String prefixTooltip = prefix;	×
90	if (!prefix.isEmpty()) {	×
91	prefixTooltip += "...";	×
92	if (template.isLocalResource(iri)) {	×
93	prefixTooltip = "local:...";	×
94	}
95	}
96	add(new ExternalLink("prefixtooltiptext", "", prefixTooltip));	×
97	textfield = new TextField<>("textfield", model);	×
98	if (!optional) textfield.setRequired(true);	×
99	if (template.isLocalResource(iri)) {	×
100	textfield.add(new AttributeAppender("class", " local"));	×
101	}
102	textfield.add(new Validator(iri, template, prefix, context));	×
103	context.getComponents().add(textfield);	×
104	if (template.getLabel(iri) != null) {	×
105	textfield.add(new AttributeModifier("placeholder", template.getLabel(iri).replaceFirst(" - .*$", "")));	×
106	textfield.setLabel(Model.of(template.getLabel(iri)));	×
107	}
108	textfield.add(new OnChangeAjaxBehavior() {	×
109
110	private static final long serialVersionUID = 1L;
111
112	@Override
113	protected void onUpdate(AjaxRequestTarget target) {
114	for (Component c : context.getComponents()) {	×
115	if (c == textfield) continue;	×
116	if (c.getDefaultModel() == textfield.getModel()) {	×
117	c.modelChanged();	×
118	target.add(c);	×
119	}
120	}	×
121	}	×
122
123	});
124	if (template.isIntroducedResource(iri) \|\| template.isEmbeddedResource(iri)) {	×
125	textfield.add(AttributeAppender.append("class", "introduced"));	×
126	}
127	add(textfield);	×
128	}	×
129
130	/**
131	* {@inheritDoc}
132	*/
133	@Override
134	public void removeFromContext() {
135	context.getComponents().remove(textfield);	×
136	}	×
137
138	/**
139	* {@inheritDoc}
140	*/
141	@Override
142	public boolean isUnifiableWith(Value v) {
143	if (v == null) return true;	×
144	if (v instanceof IRI) {	×
145	String vs = v.stringValue();	×
146	if (vs.startsWith(prefix)) vs = vs.substring(prefix.length());	×
147	if (vs.startsWith("local:")) vs = vs.replaceFirst("^local:", "");	×
148	if (context.getTemplate().isAutoEscapePlaceholder(iri)) {	×
149	vs = Utils.urlDecode(vs);	×
150	}
151	Validatable<String> validatable = new Validatable<>(vs);	×
152	if (context.getTemplate().isLocalResource(iri) && !Utils.isUriPostfix(vs)) {	×
153	vs = Utils.getUriPostfix(vs);	×
154	}
155	new Validator(iri, context.getTemplate(), prefix, context).validate(validatable);	×
156	if (!validatable.isValid()) {	×
157	return false;	×
158	}
159	if (textfield.getModelObject().isEmpty()) {	×
160	return true;	×
161	}
162	return vs.equals(textfield.getModelObject());	×
163	}
164	return false;	×
165	}
166
167	/**
168	* {@inheritDoc}
169	*/
170	@Override
171	public void unifyWith(Value v) throws UnificationException {
172	if (v == null) return;	×
173	String vs = v.stringValue();	×
174	if (!isUnifiableWith(v)) throw new UnificationException(vs);	×
175	if (!prefix.isEmpty() && vs.startsWith(prefix)) {	×
176	vs = vs.substring(prefix.length());	×
177	} else if (vs.startsWith("local:")) {	×
178	vs = vs.replaceFirst("^local:", "");	×
179	} else if (context.getTemplate().isLocalResource(iri) && !Utils.isUriPostfix(vs)) {	×
180	vs = Utils.getUriPostfix(vs);	×
181	}
182	if (context.getTemplate().isAutoEscapePlaceholder(iri)) {	×
183	vs = Utils.urlDecode(vs);	×
184	}
185	textfield.setModelObject(vs);	×
186	}	×
187
188	/**
189	* Validator class for validating IRI text fields.
190	*/
191	protected static class Validator extends InvalidityHighlighting implements IValidator<String> {
192
193	private static final long serialVersionUID = 1L;
194
195	private IRI iri;
196	private Template template;
197	private String prefix;
198	private TemplateContext context;
199
200	/**
201	* Constructor for creating a validator for an IRI text field.
202	*
203	* @param iri the IRI placeholder for this item
204	* @param template the template containing validation rules
205	* @param prefix the prefix to be used in validation
206	* @param context the template context containing models and components
207	*/
208	public Validator(IRI iri, Template template, String prefix, TemplateContext context) {	×
209	this.iri = iri;	×
210	this.template = template;	×
211	this.prefix = prefix;	×
212	this.context = context;	×
213	}	×
214
215	@Override
216	public void validate(IValidatable<String> s) {
217	String sv = s.getValue();	×
218	String p = prefix;	×
219	if (template.isAutoEscapePlaceholder(iri)) {	×
220	sv = Utils.urlEncode(sv);	×
221	}
222	if (sv.matches("https?://.+")) {	×
223	p = "";	×
224	} else if (sv.contains(":")) {	×
225	s.error(new ValidationError("Colon character is not allowed in postfix"));	×
226	}
227	String iriString = p + sv;	×
228	if (iriString.matches("[^:# ]+")) {	×
229	p = "local:";	×
230	iriString = p + sv;	×
231	}
232	try {
233	ParsedIRI piri = new ParsedIRI(iriString);	×
234	if (!piri.isAbsolute()) {	×
235	s.error(new ValidationError("IRI not well-formed"));	×
236	}
237	if (p.isEmpty() && !sv.startsWith("local:") && !sv.matches("https?://.+")) {	×
238	s.error(new ValidationError("Only http(s):// IRIs are allowed here"));	×
239	}
240	} catch (URISyntaxException ex) {	×
241	s.error(new ValidationError("IRI not well-formed"));	×
242	}	×
243	String regex = template.getRegex(iri);	×
244	if (regex != null) {	×
245	if (!sv.matches(regex)) {	×
246	s.error(new ValidationError("Value '" + sv + "' doesn't match the pattern '" + regex + "'"));	×
247	}
248	}
249	if (template.isExternalUriPlaceholder(iri)) {	×
250	if (!iriString.matches("https?://.+")) {	×
251	s.error(new ValidationError("Not an external IRI"));	×
252	}
253	}
254	if (template.isTrustyUriPlaceholder(iri)) {	×
255	if (!TrustyUriUtils.isPotentialTrustyUri(iriString)) {	×
256	s.error(new ValidationError("Not a trusty URI"));	×
257	}
258	}
259	if (iri.equals(NTEMPLATE.CREATOR_PLACEHOLDER) && context.getExistingNanopub() != null) {	×
260	boolean found = false;	×
261	for (IRI creator : SimpleCreatorPattern.getCreators(context.getExistingNanopub())) {	×
262	if (creator.stringValue().equals(iriString)) {	×
263	found = true;	×
264	break;	×
265	}
266	}	×
267	if (!found) {	×
268	s.error(new ValidationError("Not a creator of nanopub"));	×
269	}
270	}
271	}	×
272
273	}
274
275	/**
276	* {@inheritDoc}
277	*/
278	@Override
279	public void fillFinished() {
280	}	×
281
282	/**
283	* {@inheritDoc}
284	*/
285	@Override
286	public void finalizeValues() {
287	Value defaultValue = context.getTemplate().getDefault(iri);	×
288	if (isUnifiableWith(defaultValue)) {	×
289	try {
290	unifyWith(defaultValue);	×
291	} catch (UnificationException ex) {	×
292	logger.error("Could not unify default value {} with text field {}", defaultValue, this, ex);	×
293	}	×
294	}
295	}	×
296
297	/**
298	* <p>toString.</p>
299	*
300	* @return a {@link java.lang.String} object
301	*/
302	public String toString() {
303	return "[IRI textfield item: " + iri + "]";	×
304	}
305
306	}

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