17100492288

Committed 20 Aug 2025 01:52PM UTC coverage: 0.0% (-74.8%) from 74.77%

Build # 17100492288

Build Type

push

github

Committed by

kunzaatko

Commit Message

feat: introduce comprehensive transfer function models

This commit significantly expands the available transfer function models and
refactors the documentation structure to support them.

Changes include:
- **New Models:** Added Airy Disc, Gaussian, Born & Wolf, Gibson & Lanni, and
  Circular Pupil transfer function models.
- **Documentation Overhaul:** Restructured the manual pages, separating linear
  and nonlinear transfer functions, and creating dedicated sections for
  individual model types. Updated `InterLinks` for new dependencies and removed
  old API reference sections.
- **Dependency Updates:**
    - Added `ComponentArrays` and `Rotations` for new functionalities.
    - Removed `ImageFiltering` dependency.
    - Updated `InterfaceFunctions` compatibility.

Run Details

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364 existing lines in 15 files now uncovered.

0 of 633 relevant lines covered (0.0%)

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0.0

/src/psf/psf-array.jl

struct PSFArray{T<:Real, N} <: PointSpreadFunction{N}
    data::SpatialArray{T, N}
    center::Coordinate{N}
    function PSFArray(data::SpatialArray{T, N}, center::Coordinate{N}) where {T<:Real,N}
        contained(data, center) || throw(DomainError(center, "The center is not within the data bounds: $center ∉ $(axes(data))"))
        new{T,N}(data, center)
    end
end

PSFArray(data::AbstractMatrix{T}, Δ::Length, args...) where {T} = PSFArray(data, fillsize(Δ, 2), args...)
PSFArray(data::AbstractMatrix{T}, Δ::PixelSize{2}) where {T} = PSFArray(data, Δ, exactcenter(data))
PSFArray(data::SpatialMatrix{T}, args...) where {T} = PSFArray(data.data, data.Δ, args...)

function Base.show(io::IO, ::MIME"text/plain", tf::PSFArray{T}) where {T}
    showcenter = tf.center == tf.data .÷ 2
    centerstring = showcenter ? ", center = $(tf.center)" : ""
    print(io, "PSFArray(Δxy = $(allequal(tf.Δ) ? tf.Δ[1] : tf.Δ)$(centerstring)) with eltype $T with $(join(map(string, size(tf.data)), "×")) points:\n")
    Base.print_array(io, tf.data)
end

1	struct PSFArray{T<:Real, N} <: PointSpreadFunction{N}
2	data::SpatialArray{T, N}
3	center::Coordinate{N}
NEW 4	function PSFArray(data::SpatialArray{T, N}, center::Coordinate{N}) where {T<:Real,N}	×
5	contained(data, center) \|\| throw(DomainError(center, "The center is not within the data bounds: $center ∉ $(axes(data))"))	×
NEW 6	new{T,N}(data, center)	×
7	end
8	end
9
10	PSFArray(data::AbstractMatrix{T}, Δ::Length, args...) where {T} = PSFArray(data, fillsize(Δ, 2), args...)	×
11	PSFArray(data::AbstractMatrix{T}, Δ::PixelSize{2}) where {T} = PSFArray(data, Δ, exactcenter(data))	×
12	PSFArray(data::SpatialMatrix{T}, args...) where {T} = PSFArray(data.data, data.Δ, args...)	×
13
14	function Base.show(io::IO, ::MIME"text/plain", tf::PSFArray{T}) where {T}	×
15	showcenter = tf.center == tf.data .÷ 2	×
16	centerstring = showcenter ? ", center = $(tf.center)" : ""	×
17	print(io, "PSFArray(Δxy = $(allequal(tf.Δ) ? tf.Δ[1] : tf.Δ)$(centerstring)) with eltype $T with $(join(map(string, size(tf.data)), "×")) points:\n")	×
18	Base.print_array(io, tf.data)	×
19	end

kunzaatko / TransferFunctions.jl / 17100492288

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