15979268264

Committed 30 Jun 2025 05:11PM UTC coverage: 74.965% (+2.5%) from 72.437%

Build # 15979268264

Build Type

push

github

Committed by

web-flow

Commit Message

fix: index tests (#331)

Run Details

239 of 404 branches covered (59.16%)

Branch coverage included in aggregate %.

830 of 1022 relevant lines covered (81.21%)

58.42 hits per line

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73.08

/src/server.ts

import { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
import { Session } from "./session.js";
import { Transport } from "@modelcontextprotocol/sdk/shared/transport.js";
import { AtlasTools } from "./tools/atlas/tools.js";
import { MongoDbTools } from "./tools/mongodb/tools.js";
import logger, { initializeLogger, LogId } from "./logger.js";
import { ObjectId } from "mongodb";
import { Telemetry } from "./telemetry/telemetry.js";
import { UserConfig } from "./config.js";
import { type ServerEvent } from "./telemetry/types.js";
import { type ServerCommand } from "./telemetry/types.js";
import { CallToolRequestSchema, CallToolResult } from "@modelcontextprotocol/sdk/types.js";
import assert from "assert";

export interface ServerOptions {
    session: Session;
    userConfig: UserConfig;
    mcpServer: McpServer;
    telemetry: Telemetry;
}

export class Server {
    public readonly session: Session;
    private readonly mcpServer: McpServer;
    private readonly telemetry: Telemetry;
    public readonly userConfig: UserConfig;
    private readonly startTime: number;

    constructor({ session, mcpServer, userConfig, telemetry }: ServerOptions) {
        this.startTime = Date.now();
        this.session = session;
        this.telemetry = telemetry;
        this.mcpServer = mcpServer;
        this.userConfig = userConfig;
    }

    async connect(transport: Transport): Promise<void> {
        this.mcpServer.server.registerCapabilities({ logging: {} });

        this.registerTools();
        this.registerResources();

        // This is a workaround for an issue we've seen with some models, where they'll see that everything in the `arguments`
        // object is optional, and then not pass it at all. However, the MCP server expects the `arguments` object to be if
        // the tool accepts any arguments, even if they're all optional.
        //
        // see: https://github.com/modelcontextprotocol/typescript-sdk/blob/131776764536b5fdca642df51230a3746fb4ade0/src/server/mcp.ts#L705
        // Since paramsSchema here is not undefined, the server will create a non-optional z.object from it.
        const existingHandler = (
            this.mcpServer.server["_requestHandlers"] as Map<
                string,
                (request: unknown, extra: unknown) => Promise<CallToolResult>
            >
        ).get(CallToolRequestSchema.shape.method.value);

        assert(existingHandler, "No existing handler found for CallToolRequestSchema");

        this.mcpServer.server.setRequestHandler(CallToolRequestSchema, (request, extra): Promise<CallToolResult> => {
            if (!request.params.arguments) {
                request.params.arguments = {};
            }

            return existingHandler(request, extra);
        });

        await initializeLogger(this.mcpServer, this.userConfig.logPath);

        await this.mcpServer.connect(transport);

        this.mcpServer.server.oninitialized = () => {
            this.session.setAgentRunner(this.mcpServer.server.getClientVersion());
            this.session.sessionId = new ObjectId().toString();

            logger.info(
                LogId.serverInitialized,
                "server",
                `Server started with transport ${transport.constructor.name} and agent runner ${this.session.agentRunner?.name}`
            );

            this.emitServerEvent("start", Date.now() - this.startTime);
        };

        this.mcpServer.server.onclose = () => {
            const closeTime = Date.now();
            this.emitServerEvent("stop", Date.now() - closeTime);
        };

        this.mcpServer.server.onerror = (error: Error) => {
            const closeTime = Date.now();
            this.emitServerEvent("stop", Date.now() - closeTime, error);
        };

        await this.validateConfig();
    }

    async close(): Promise<void> {
        await this.telemetry.close();
        await this.session.close();
        await this.mcpServer.close();
    }

    /**
     * Emits a server event
     * @param command - The server command (e.g., "start", "stop", "register", "deregister")
     * @param additionalProperties - Additional properties specific to the event
     */
    private emitServerEvent(command: ServerCommand, commandDuration: number, error?: Error) {
        const event: ServerEvent = {
            timestamp: new Date().toISOString(),
            source: "mdbmcp",
            properties: {
                result: "success",
                duration_ms: commandDuration,
                component: "server",
                category: "other",
                command: command,
            },
        };

        if (command === "start") {
            event.properties.startup_time_ms = commandDuration;
            event.properties.read_only_mode = this.userConfig.readOnly || false;
            event.properties.disabled_tools = this.userConfig.disabledTools || [];
        }
        if (command === "stop") {
            event.properties.runtime_duration_ms = Date.now() - this.startTime;
            if (error) {
                event.properties.result = "failure";
                event.properties.reason = error.message;
            }
        }

        this.telemetry.emitEvents([event]);
    }

    private registerTools() {
        for (const tool of [...AtlasTools, ...MongoDbTools]) {
            new tool(this.session, this.userConfig, this.telemetry).register(this.mcpServer);
        }
    }

    private registerResources() {
        this.mcpServer.resource(
            "config",
            "config://config",
            {
                description:
                    "Server configuration, supplied by the user either as environment variables or as startup arguments",
            },
            (uri) => {
                const result = {
                    telemetry: this.userConfig.telemetry,
                    logPath: this.userConfig.logPath,
                    connectionString: this.userConfig.connectionString
                        ? "set; access to MongoDB tools are currently available to use"
                        : "not set; before using any MongoDB tool, you need to configure a connection string, alternatively you can setup MongoDB Atlas access, more info at 'https://github.com/mongodb-js/mongodb-mcp-server'.",
                    connectOptions: this.userConfig.connectOptions,
                    atlas:
                        this.userConfig.apiClientId && this.userConfig.apiClientSecret
                            ? "set; MongoDB Atlas tools are currently available to use"
                            : "not set; MongoDB Atlas tools are currently unavailable, to have access to MongoDB Atlas tools like creating clusters or connecting to clusters make sure to setup credentials, more info at 'https://github.com/mongodb-js/mongodb-mcp-server'.",
                };
                return {
                    contents: [
                        {
                            text: JSON.stringify(result),
                            mimeType: "application/json",
                            uri: uri.href,
                        },
                    ],
                };
            }
        );
    }

    private async validateConfig(): Promise<void> {
        if (this.userConfig.connectionString) {
            try {
                await this.session.connectToMongoDB(this.userConfig.connectionString, this.userConfig.connectOptions);
            } catch (error) {
                console.error(
                    "Failed to connect to MongoDB instance using the connection string from the config: ",
                    error
                );
                throw new Error("Failed to connect to MongoDB instance using the connection string from the config");
            }
        }

        if (this.userConfig.apiClientId && this.userConfig.apiClientSecret) {
            try {
                await this.session.apiClient.validateAccessToken();
            } catch (error) {
                if (this.userConfig.connectionString === undefined) {
                    console.error("Failed to validate MongoDB Atlas the credentials from the config: ", error);

                    throw new Error(
                        "Failed to connect to MongoDB Atlas instance using the credentials from the config"
                    );
                }
                console.error(
                    "Failed to validate MongoDB Atlas the credentials from the config, but validated the connection string."
                );
            }
        }
    }
}

1	import { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
2	import { Session } from "./session.js";
3	import { Transport } from "@modelcontextprotocol/sdk/shared/transport.js";
4	import { AtlasTools } from "./tools/atlas/tools.js";
5	import { MongoDbTools } from "./tools/mongodb/tools.js";
6	import logger, { initializeLogger, LogId } from "./logger.js";
7	import { ObjectId } from "mongodb";
8	import { Telemetry } from "./telemetry/telemetry.js";
9	import { UserConfig } from "./config.js";
10	import { type ServerEvent } from "./telemetry/types.js";
11	import { type ServerCommand } from "./telemetry/types.js";
12	import { CallToolRequestSchema, CallToolResult } from "@modelcontextprotocol/sdk/types.js";
13	import assert from "assert";
14
15	export interface ServerOptions {
16	session: Session;
17	userConfig: UserConfig;
18	mcpServer: McpServer;
19	telemetry: Telemetry;
20	}
21
22	export class Server {
23	public readonly session: Session;
24	private readonly mcpServer: McpServer;
25	private readonly telemetry: Telemetry;
26	public readonly userConfig: UserConfig;
27	private readonly startTime: number;
28
29	constructor({ session, mcpServer, userConfig, telemetry }: ServerOptions) {
30	this.startTime = Date.now();	33✔
31	this.session = session;	33✔
32	this.telemetry = telemetry;	33✔
33	this.mcpServer = mcpServer;	33✔
34	this.userConfig = userConfig;	33✔
35	}
36
37	async connect(transport: Transport): Promise<void> {
38	this.mcpServer.server.registerCapabilities({ logging: {} });	33✔
39
40	this.registerTools();	33✔
41	this.registerResources();	33✔
42
43	// This is a workaround for an issue we've seen with some models, where they'll see that everything in the `arguments`
44	// object is optional, and then not pass it at all. However, the MCP server expects the `arguments` object to be if
45	// the tool accepts any arguments, even if they're all optional.
46	//
47	// see: https://github.com/modelcontextprotocol/typescript-sdk/blob/131776764536b5fdca642df51230a3746fb4ade0/src/server/mcp.ts#L705
48	// Since paramsSchema here is not undefined, the server will create a non-optional z.object from it.
49	const existingHandler = (
50	this.mcpServer.server["_requestHandlers"] as Map<	33✔
51	string,
52	(request: unknown, extra: unknown) => Promise<CallToolResult>
53	>
54	).get(CallToolRequestSchema.shape.method.value);
55
56	assert(existingHandler, "No existing handler found for CallToolRequestSchema");	33✔
57
58	this.mcpServer.server.setRequestHandler(CallToolRequestSchema, (request, extra): Promise<CallToolResult> => {	33✔
59	if (!request.params.arguments) {	370✔
60	request.params.arguments = {};	1✔
61	}
62
63	return existingHandler(request, extra);	370✔
64	});
65
66	await initializeLogger(this.mcpServer, this.userConfig.logPath);	33✔
67
68	await this.mcpServer.connect(transport);	33✔
69
70	this.mcpServer.server.oninitialized = () => {	33✔
71	this.session.setAgentRunner(this.mcpServer.server.getClientVersion());	33✔
72	this.session.sessionId = new ObjectId().toString();	33✔
73
74	logger.info(	33✔
75	LogId.serverInitialized,
76	"server",
77	`Server started with transport ${transport.constructor.name} and agent runner ${this.session.agentRunner?.name}`
78	);
79
80	this.emitServerEvent("start", Date.now() - this.startTime);	33✔
81	};
82
83	this.mcpServer.server.onclose = () => {	33✔
84	const closeTime = Date.now();	33✔
85	this.emitServerEvent("stop", Date.now() - closeTime);	33✔
86	};
87
88	this.mcpServer.server.onerror = (error: Error) => {	33✔
89	const closeTime = Date.now();	×
90	this.emitServerEvent("stop", Date.now() - closeTime, error);	×
91	};
92
93	await this.validateConfig();	33✔
94	}
95
96	async close(): Promise<void> {
97	await this.telemetry.close();	33✔
98	await this.session.close();	33✔
99	await this.mcpServer.close();	33✔
100	}
101
102	/**
103	* Emits a server event
104	* @param command - The server command (e.g., "start", "stop", "register", "deregister")
105	* @param additionalProperties - Additional properties specific to the event
106	*/
107	private emitServerEvent(command: ServerCommand, commandDuration: number, error?: Error) {
108	const event: ServerEvent = {	66✔
109	timestamp: new Date().toISOString(),
110	source: "mdbmcp",
111	properties: {
112	result: "success",
113	duration_ms: commandDuration,
114	component: "server",
115	category: "other",
116	command: command,
117	},
118	};
119
120	if (command === "start") {	66✔
121	event.properties.startup_time_ms = commandDuration;	33✔
122	event.properties.read_only_mode = this.userConfig.readOnly \|\| false;	33✔
123	event.properties.disabled_tools = this.userConfig.disabledTools \|\| [];	33!
124	}
125	if (command === "stop") {	66✔
126	event.properties.runtime_duration_ms = Date.now() - this.startTime;	33✔
127	if (error) {	33!
128	event.properties.result = "failure";	×
129	event.properties.reason = error.message;	×
130	}
131	}
132
133	this.telemetry.emitEvents([event]);	66✔
134	}
135
136	private registerTools() {
137	for (const tool of [...AtlasTools, ...MongoDbTools]) {	33✔
138	new tool(this.session, this.userConfig, this.telemetry).register(this.mcpServer);	1,056✔
139	}
140	}
141
142	private registerResources() {
143	this.mcpServer.resource(	33✔
144	"config",
145	"config://config",
146	{
147	description:
148	"Server configuration, supplied by the user either as environment variables or as startup arguments",
149	},
150	(uri) => {
151	const result = {	×
152	telemetry: this.userConfig.telemetry,
153	logPath: this.userConfig.logPath,
154	connectionString: this.userConfig.connectionString	×
155	? "set; access to MongoDB tools are currently available to use"
156	: "not set; before using any MongoDB tool, you need to configure a connection string, alternatively you can setup MongoDB Atlas access, more info at 'https://github.com/mongodb-js/mongodb-mcp-server'.",
157	connectOptions: this.userConfig.connectOptions,
158	atlas:
159	this.userConfig.apiClientId && this.userConfig.apiClientSecret	×
160	? "set; MongoDB Atlas tools are currently available to use"
161	: "not set; MongoDB Atlas tools are currently unavailable, to have access to MongoDB Atlas tools like creating clusters or connecting to clusters make sure to setup credentials, more info at 'https://github.com/mongodb-js/mongodb-mcp-server'.",
162	};
163	return {	×
164	contents: [
165	{
166	text: JSON.stringify(result),
167	mimeType: "application/json",
168	uri: uri.href,
169	},
170	],
171	};
172	}
173	);
174	}
175
176	private async validateConfig(): Promise<void> {
177	if (this.userConfig.connectionString) {	33✔
178	try {	1✔
179	await this.session.connectToMongoDB(this.userConfig.connectionString, this.userConfig.connectOptions);	1✔
180	} catch (error) {
181	console.error(	×
182	"Failed to connect to MongoDB instance using the connection string from the config: ",
183	error
184	);
185	throw new Error("Failed to connect to MongoDB instance using the connection string from the config");	×
186	}
187	}
188
189	if (this.userConfig.apiClientId && this.userConfig.apiClientSecret) {	33✔
190	try {	8✔
191	await this.session.apiClient.validateAccessToken();	8✔
192	} catch (error) {
193	if (this.userConfig.connectionString === undefined) {	×
194	console.error("Failed to validate MongoDB Atlas the credentials from the config: ", error);	×
195
196	throw new Error(	×
197	"Failed to connect to MongoDB Atlas instance using the credentials from the config"
198	);
199	}
200	console.error(	×
201	"Failed to validate MongoDB Atlas the credentials from the config, but validated the connection string."
202	);
203	}
204	}
205	}
206	}

mongodb-js / mongodb-mcp-server / 15979268264

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