#5817

Committed 02 May 2025 01:06PM UTC coverage: 78.733% (-1.3%) from 80.036%

Build # #5817

Build Type

push

Committed by

Commit Message

DT-1595 Remove unused endpoints (#2507)

Coverage Stats

2 of 2 new or added lines in 1 file covered. (100.0%)

159 existing lines in 7 files now uncovered.

10029 of 12738 relevant lines covered (78.73%)

0.79 hits per line

Source File
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57.14

/src/main/java/org/broadinstitute/consent/http/models/dto/DatasetDTO.java

package org.broadinstitute.consent.http.models.dto;

import com.fasterxml.jackson.annotation.JsonProperty;
import java.sql.Date;
import java.sql.Timestamp;
import java.util.ArrayList;
import java.util.List;
import java.util.Objects;
import org.broadinstitute.consent.http.models.DataUse;
import org.broadinstitute.consent.http.models.Dataset;

@Deprecated
public class DatasetDTO {

  @JsonProperty
  private String datasetName;

  @JsonProperty
  private Integer dacId;

  @JsonProperty
  private Integer datasetId;

  @JsonProperty
  private String consentId;

  @JsonProperty
  private Boolean deletable;

  @JsonProperty
  private List<DatasetPropertyDTO> properties;

  @JsonProperty
  private Boolean isAssociatedToDataOwners;

  @JsonProperty
  private Boolean updateAssociationToDataOwnerAllowed;

  @JsonProperty
  private String alias;

  @JsonProperty
  private String objectId;

  @JsonProperty
  private Date createDate;

  @JsonProperty
  private Integer createUserId;

  @JsonProperty
  private Timestamp updateDate;

  @JsonProperty
  private Integer updateUserId;

  @JsonProperty
  public DataUse dataUse;

  public DatasetDTO() {
  }

  public String getDatasetName() {
    return datasetName;
  }

  public void setDatasetName(String datasetName) {
    this.datasetName = datasetName;
  }

  public Integer getDacId() {
    return dacId;
  }

  public void setDacId(Integer dacId) {
    this.dacId = dacId;
  }

  public DatasetDTO(List<DatasetPropertyDTO> properties) {
    this.properties = properties;
  }

  public String getConsentId() {
    return consentId;
  }

  public void setConsentId(String consentId) {
    this.consentId = consentId;
  }

  public Boolean getDeletable() {
    return deletable;
  }

  public void setDeletable(Boolean deletable) {
    this.deletable = deletable;
  }

  public String getPropertyValue(String propertyName) {
    return properties.get(properties.indexOf(new DatasetPropertyDTO(propertyName, "")))
        .getPropertyValue();
  }

  public List<DatasetPropertyDTO> getProperties() {
    return properties;
  }

  public void setProperties(List<DatasetPropertyDTO> properties) {
    this.properties = properties;
  }

  public Boolean getIsAssociatedToDataOwners() {
    return isAssociatedToDataOwners;
  }

  public void setIsAssociatedToDataOwners(Boolean isAssociatedToDataOwners) {
    this.isAssociatedToDataOwners = isAssociatedToDataOwners;
  }

  public Boolean getUpdateAssociationToDataOwnerAllowed() {
    return updateAssociationToDataOwnerAllowed;
  }

  public void setUpdateAssociationToDataOwnerAllowed(Boolean updateAssociationToDataOwnerAllowed) {
    this.updateAssociationToDataOwnerAllowed = updateAssociationToDataOwnerAllowed;
  }

  public void setDatasetId(Integer datasetId) {
    this.datasetId = datasetId;
  }

  public Integer getDatasetId() {
    return datasetId;
  }

  public void setAlias(Integer alias) {
    this.alias = Dataset.parseAliasToIdentifier(alias);
  }

  public String getAlias() {
    return alias;
  }

  public String getObjectId() {
    return objectId;
  }

  public void setObjectId(String objectId) {
    this.objectId = objectId;
  }

  public Date getCreateDate() {
    return createDate;
  }

  public void setCreateDate(Date createDate) {
    this.createDate = createDate;
  }

  public Integer getCreateUserId() {
    return createUserId;
  }

  public void setCreateUserId(Integer createUserId) {
    this.createUserId = createUserId;
  }

  public Timestamp getUpdateDate() {
    return updateDate;
  }

  public void setUpdateDate(Timestamp updateDate) {
    this.updateDate = updateDate;
  }

  public Integer getUpdateUserId() {
    return updateUserId;
  }

  public void setUpdateUserId(Integer updateUserId) {
    this.updateUserId = updateUserId;
  }

  public void addProperty(DatasetPropertyDTO property) {
    if (this.getProperties() == null) {
      this.setProperties(new ArrayList<>());
    }
    this.getProperties().add(property);
  }

  public DataUse getDataUse() {
    return dataUse;
  }

  public void setDataUse(DataUse dataUse) {
    this.dataUse = dataUse;
  }

  @Override
  public boolean equals(Object o) {
    if (this == o) {
      return true;
    }
    if (o == null || getClass() != o.getClass()) {
      return false;
    }
    DatasetDTO that = (DatasetDTO) o;
    return datasetId.equals(that.datasetId);
  }

  @Override
  public int hashCode() {
    return Objects.hash(datasetId);
  }
}

1	package org.broadinstitute.consent.http.models.dto;
2
3	import com.fasterxml.jackson.annotation.JsonProperty;
4	import java.sql.Date;
5	import java.sql.Timestamp;
6	import java.util.ArrayList;
7	import java.util.List;
8	import java.util.Objects;
9	import org.broadinstitute.consent.http.models.DataUse;
10	import org.broadinstitute.consent.http.models.Dataset;
11
12	@Deprecated
13	public class DatasetDTO {
14
15	@JsonProperty
16	private String datasetName;
17
18	@JsonProperty
19	private Integer dacId;
20
21	@JsonProperty
22	private Integer datasetId;
23
24	@JsonProperty
25	private String consentId;
26
27	@JsonProperty
28	private Boolean deletable;
29
30	@JsonProperty
31	private List<DatasetPropertyDTO> properties;
32
33	@JsonProperty
34	private Boolean isAssociatedToDataOwners;
35
36	@JsonProperty
37	private Boolean updateAssociationToDataOwnerAllowed;
38
39	@JsonProperty
40	private String alias;
41
42	@JsonProperty
43	private String objectId;
44
45	@JsonProperty
46	private Date createDate;
47
48	@JsonProperty
49	private Integer createUserId;
50
51	@JsonProperty
52	private Timestamp updateDate;
53
54	@JsonProperty
55	private Integer updateUserId;
56
57	@JsonProperty
58	public DataUse dataUse;
59
60	public DatasetDTO() {	1✔
61	}	1✔
62
63	public String getDatasetName() {
64	return datasetName;	×
65	}
66
67	public void setDatasetName(String datasetName) {
68	this.datasetName = datasetName;	×
69	}	×
70
71	public Integer getDacId() {
UNCOV 72	return dacId;	×
73	}
74
75	public void setDacId(Integer dacId) {
76	this.dacId = dacId;	1✔
77	}	1✔
78
79	public DatasetDTO(List<DatasetPropertyDTO> properties) {	1✔
80	this.properties = properties;	1✔
81	}	1✔
82
83	public String getConsentId() {
84	return consentId;	×
85	}
86
87	public void setConsentId(String consentId) {
88	this.consentId = consentId;	×
89	}	×
90
91	public Boolean getDeletable() {
92	return deletable;	×
93	}
94
95	public void setDeletable(Boolean deletable) {
96	this.deletable = deletable;	×
97	}	×
98
99	public String getPropertyValue(String propertyName) {
100	return properties.get(properties.indexOf(new DatasetPropertyDTO(propertyName, "")))	×
101	.getPropertyValue();	×
102	}
103
104	public List<DatasetPropertyDTO> getProperties() {
105	return properties;	1✔
106	}
107
108	public void setProperties(List<DatasetPropertyDTO> properties) {
109	this.properties = properties;	1✔
110	}	1✔
111
112	public Boolean getIsAssociatedToDataOwners() {
113	return isAssociatedToDataOwners;	×
114	}
115
116	public void setIsAssociatedToDataOwners(Boolean isAssociatedToDataOwners) {
117	this.isAssociatedToDataOwners = isAssociatedToDataOwners;	×
118	}	×
119
120	public Boolean getUpdateAssociationToDataOwnerAllowed() {
121	return updateAssociationToDataOwnerAllowed;	×
122	}
123
124	public void setUpdateAssociationToDataOwnerAllowed(Boolean updateAssociationToDataOwnerAllowed) {
125	this.updateAssociationToDataOwnerAllowed = updateAssociationToDataOwnerAllowed;	×
126	}	×
127
128	public void setDatasetId(Integer datasetId) {
129	this.datasetId = datasetId;	1✔
130	}	1✔
131
132	public Integer getDatasetId() {
133	return datasetId;	1✔
134	}
135
136	public void setAlias(Integer alias) {
137	this.alias = Dataset.parseAliasToIdentifier(alias);	1✔
138	}	1✔
139
140	public String getAlias() {
141	return alias;	×
142	}
143
144	public String getObjectId() {
145	return objectId;	×
146	}
147
148	public void setObjectId(String objectId) {
149	this.objectId = objectId;	1✔
150	}	1✔
151
152	public Date getCreateDate() {
153	return createDate;	×
154	}
155
156	public void setCreateDate(Date createDate) {
157	this.createDate = createDate;	1✔
158	}	1✔
159
160	public Integer getCreateUserId() {
161	return createUserId;	×
162	}
163
164	public void setCreateUserId(Integer createUserId) {
165	this.createUserId = createUserId;	1✔
166	}	1✔
167
168	public Timestamp getUpdateDate() {
169	return updateDate;	×
170	}
171
172	public void setUpdateDate(Timestamp updateDate) {
173	this.updateDate = updateDate;	1✔
174	}	1✔
175
176	public Integer getUpdateUserId() {
177	return updateUserId;	×
178	}
179
180	public void setUpdateUserId(Integer updateUserId) {
181	this.updateUserId = updateUserId;	1✔
182	}	1✔
183
184	public void addProperty(DatasetPropertyDTO property) {
185	if (this.getProperties() == null) {	1✔
186	this.setProperties(new ArrayList<>());	×
187	}
188	this.getProperties().add(property);	1✔
189	}	1✔
190
191	public DataUse getDataUse() {
192	return dataUse;	×
193	}
194
195	public void setDataUse(DataUse dataUse) {
196	this.dataUse = dataUse;	1✔
197	}	1✔
198
199	@Override
200	public boolean equals(Object o) {
201	if (this == o) {	1✔
202	return true;	1✔
203	}
204	if (o == null \|\| getClass() != o.getClass()) {	1✔
205	return false;	×
206	}
207	DatasetDTO that = (DatasetDTO) o;	1✔
208	return datasetId.equals(that.datasetId);	1✔
209	}
210
211	@Override
212	public int hashCode() {
213	return Objects.hash(datasetId);	1✔
214	}
215	}

DataBiosphere / consent / #5817

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