#381

Committed 29 Apr 2025 02:09PM UTC coverage: 88.884%. First build

Build # #381

Build Type

Pull #233

github

Committed by

Pfeil

Commit Message

feat: add Javadoc generation step to CI pipeline

Pull Request Pull Request #233: Version 2.1.0

Run Details

598 of 700 new or added lines in 28 files covered. (85.43%)

1879 of 2114 relevant lines covered (88.88%)

0.89 hits per line

Source File
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83.87

/src/main/java/edu/kit/datamanager/ro_crate/externalproviders/organizationprovider/RorProvider.java

package edu.kit.datamanager.ro_crate.externalproviders.organizationprovider;

import com.fasterxml.jackson.databind.JsonNode;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.fasterxml.jackson.databind.node.ObjectNode;

import edu.kit.datamanager.ro_crate.entities.contextual.OrganizationEntity;
import edu.kit.datamanager.ro_crate.objectmapper.MyObjectMapper;

import java.io.IOException;
import java.util.ArrayList;

import org.apache.http.HttpStatus;
import org.apache.http.client.methods.CloseableHttpResponse;
import org.apache.http.client.methods.HttpGet;
import org.apache.http.impl.client.CloseableHttpClient;
import org.apache.http.impl.client.HttpClients;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

/**
 * Class providing possibility to import organization entities from ror.com.
 */
public class RorProvider {

    private static final Logger logger = LoggerFactory.getLogger(RorProvider.class);

    private RorProvider() {
    }

    /**
     * The method that parses a ror entry to a crate entity.
     *
     * @param url the url of the ror entry.
     * @return the created Organization entity.
     */
    public static OrganizationEntity getOrganization(String url) {
        if (!url.startsWith("https://ror.org/")) {
            throw new IllegalArgumentException("Should provide ror url");
        }
        String newUrl = "https://api.ror.org/v2/organizations/" + url.replaceAll("https://ror.org/", "");
        HttpGet request = new HttpGet(newUrl);

        try (
                CloseableHttpClient httpClient = HttpClients.createDefault(); CloseableHttpResponse response = httpClient.execute(request)) {
            boolean isError = response.getStatusLine().getStatusCode() != HttpStatus.SC_OK;
            if (isError) {
                String errorMessage = String.format("Identifier not found: %s", response.getStatusLine().toString());
                logger.error(errorMessage);
                return null;
            }
            ObjectNode jsonNode = MyObjectMapper.getMapper().readValue(response.getEntity().getContent(),
                    ObjectNode.class);

            return new OrganizationEntity.OrganizationEntityBuilder()
                    .setId(jsonNode.path("id").asText())
                    .addProperty("name", getOrganizationNameV2(jsonNode.path("names")))
                    .addProperty("email", jsonNode.path("email_address"))
                    .addProperty("url", jsonNode.path("id").asText())
                    .build();
        } catch (IOException e) {
            String errorMessage = String.format("IO error: %s", e.getMessage());
            logger.error(errorMessage);
        }
        return null;
    }

    private static String getOrganizationNameV2(JsonNode node) {
        if (node.isArray()) {
            for (JsonNode n : node) {
                if (n.has("types") && n.path("types").isArray()) {
                    ArrayList<?> l = new ObjectMapper().convertValue(n.path("types"), ArrayList.class);
                    if (l.contains("ror_display")) {
                        return n.path("value").asText();
                    }
                }
            }
            //fallback
            return node.path(0).path("value").asText();
        } else {
            return node.asText();
        }
    }

}

1	package edu.kit.datamanager.ro_crate.externalproviders.organizationprovider;
2
3	import com.fasterxml.jackson.databind.JsonNode;
4	import com.fasterxml.jackson.databind.ObjectMapper;
5	import com.fasterxml.jackson.databind.node.ObjectNode;
6
7	import edu.kit.datamanager.ro_crate.entities.contextual.OrganizationEntity;
8	import edu.kit.datamanager.ro_crate.objectmapper.MyObjectMapper;
9
10	import java.io.IOException;
11	import java.util.ArrayList;
12
13	import org.apache.http.HttpStatus;
14	import org.apache.http.client.methods.CloseableHttpResponse;
15	import org.apache.http.client.methods.HttpGet;
16	import org.apache.http.impl.client.CloseableHttpClient;
17	import org.apache.http.impl.client.HttpClients;
18	import org.slf4j.Logger;
19	import org.slf4j.LoggerFactory;
20
21	/**
22	* Class providing possibility to import organization entities from ror.com.
23	*/
24	public class RorProvider {
25
26	private static final Logger logger = LoggerFactory.getLogger(RorProvider.class);	1✔
27
28	private RorProvider() {
29	}
30
31	/**
32	* The method that parses a ror entry to a crate entity.
33	*
34	* @param url the url of the ror entry.
35	* @return the created Organization entity.
36	*/
37	public static OrganizationEntity getOrganization(String url) {
38	if (!url.startsWith("https://ror.org/")) {	1✔
39	throw new IllegalArgumentException("Should provide ror url");	1✔
40	}
41	String newUrl = "https://api.ror.org/v2/organizations/" + url.replaceAll("https://ror.org/", "");	1✔
42	HttpGet request = new HttpGet(newUrl);	1✔
43
44	try (
45	CloseableHttpClient httpClient = HttpClients.createDefault(); CloseableHttpResponse response = httpClient.execute(request)) {	1✔
46	boolean isError = response.getStatusLine().getStatusCode() != HttpStatus.SC_OK;	1✔
47	if (isError) {	1✔
48	String errorMessage = String.format("Identifier not found: %s", response.getStatusLine().toString());	1✔
49	logger.error(errorMessage);	1✔
50	return null;	1✔
51	}
52	ObjectNode jsonNode = MyObjectMapper.getMapper().readValue(response.getEntity().getContent(),	1✔
53	ObjectNode.class);
54
55	return new OrganizationEntity.OrganizationEntityBuilder()	1✔
56	.setId(jsonNode.path("id").asText())	1✔
57	.addProperty("name", getOrganizationNameV2(jsonNode.path("names")))	1✔
58	.addProperty("email", jsonNode.path("email_address"))	1✔
59	.addProperty("url", jsonNode.path("id").asText())	1✔
60	.build();	1✔
61	} catch (IOException e) {	1✔
NEW 62	String errorMessage = String.format("IO error: %s", e.getMessage());	×
NEW 63	logger.error(errorMessage);	×
64	}
NEW 65	return null;	×
66	}
67
68	private static String getOrganizationNameV2(JsonNode node) {
69	if (node.isArray()) {	1✔
70	for (JsonNode n : node) {	1✔
71	if (n.has("types") && n.path("types").isArray()) {	1✔
72	ArrayList<?> l = new ObjectMapper().convertValue(n.path("types"), ArrayList.class);	1✔
73	if (l.contains("ror_display")) {	1✔
74	return n.path("value").asText();	1✔
75	}
76	}
77	}	1✔
78	//fallback
NEW 79	return node.path(0).path("value").asText();	×
80	} else {
NEW 81	return node.asText();	×
82	}
83	}
84
85	}

kit-data-manager / ro-crate-java / #381

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