12831955796

Committed 17 Jan 2025 03:25PM UTC coverage: 85.401%. First build

Build # 12831955796

Build Type

Pull #4114

github

Committed by

web-flow

Commit Message

Merge 964691ea2 into cdb446586

Pull Request Pull Request #4114: (Improve order flow) Add error logging

Run Details

3 of 14 new or added lines in 2 files covered. (21.43%)

25651 of 30036 relevant lines covered (85.4%)

0.85 hits per line

Source File
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58.33

/cg/services/orders/validation/errors/validation_errors.py

from pydantic import BaseModel

from cg.services.orders.validation.errors.case_errors import CaseError
from cg.services.orders.validation.errors.case_sample_errors import CaseSampleError
from cg.services.orders.validation.errors.order_errors import OrderError
from cg.services.orders.validation.errors.sample_errors import SampleError


class ValidationErrors(BaseModel):
    order_errors: list[OrderError] = []
    case_errors: list[CaseError] = []
    sample_errors: list[SampleError] = []
    case_sample_errors: list[CaseSampleError] = []

    @property
    def is_empty(self) -> bool:
        """Return True if there are no errors in any of the attributes."""
        return all(not getattr(self, field) for field in self.model_fields)

    def get_error_message(self) -> str:
        """Gets a string documenting all errors."""
        error_string = ""
        for error in self.order_errors:
            error_string += f"Problem with {error.field}: {error.message} \n"
        for error in self.case_errors:
            error_string += (
                f"Problem with {error.field} in case {error.case_index}: {error.message} \n"
            )
        for error in self.case_sample_errors:
            error_string += f"Problem with {error.field} in case {error.case_index} sample {error.sample_index}: {error.message} \n"
        for error in self.sample_errors:
            error_string += (
                f"Problem with {error.field} in sample {error.sample_index}: {error.message} \n"
            )
        return error_string

1	from pydantic import BaseModel	1✔
2
3	from cg.services.orders.validation.errors.case_errors import CaseError	1✔
4	from cg.services.orders.validation.errors.case_sample_errors import CaseSampleError	1✔
5	from cg.services.orders.validation.errors.order_errors import OrderError	1✔
6	from cg.services.orders.validation.errors.sample_errors import SampleError	1✔
7
8
9	class ValidationErrors(BaseModel):	1✔
10	order_errors: list[OrderError] = []	1✔
11	case_errors: list[CaseError] = []	1✔
12	sample_errors: list[SampleError] = []	1✔
13	case_sample_errors: list[CaseSampleError] = []	1✔
14
15	@property	1✔
16	def is_empty(self) -> bool:	1✔
17	"""Return True if there are no errors in any of the attributes."""
18	return all(not getattr(self, field) for field in self.model_fields)	1✔
19
20	def get_error_message(self) -> str:	1✔
21	"""Gets a string documenting all errors."""
NEW 22	error_string = ""	×
NEW 23	for error in self.order_errors:	×
NEW 24	error_string += f"Problem with {error.field}: {error.message} \n"	×
NEW 25	for error in self.case_errors:	×
NEW 26	error_string += (	×
27	f"Problem with {error.field} in case {error.case_index}: {error.message} \n"
28	)
NEW 29	for error in self.case_sample_errors:	×
NEW 30	error_string += f"Problem with {error.field} in case {error.case_index} sample {error.sample_index}: {error.message} \n"	×
NEW 31	for error in self.sample_errors:	×
NEW 32	error_string += (	×
33	f"Problem with {error.field} in sample {error.sample_index}: {error.message} \n"
34	)
NEW 35	return error_string	×

Clinical-Genomics / cg / 12831955796

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