10387727026

Committed 14 Aug 2024 12:39PM UTC coverage: 84.734%. First build

Build # 10387727026

Build Type

Pull #3453

github

Committed by

web-flow

Commit Message

Merge 06482a3bc into 9a7798fb0

Pull Request Pull Request #3453: feature(dev-branch-pacbio)

Run Details

525 of 574 new or added lines in 34 files covered. (91.46%)

21691 of 25599 relevant lines covered (84.73%)

0.85 hits per line

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85.71

/cg/services/run_devices/error_handler.py

"""Module that holds the error handlers for the Post Processing service."""

import logging

from cg.exc import CgError

LOG = logging.getLogger(__name__)


def handle_post_processing_errors(to_except: tuple, to_raise):
    """Handle errors for the Post processing services."""

    def error_handling(fn):
        def wrapper(*args, **kwargs):
            try:
                return fn(*args, **kwargs)
            except to_except as error:
                raise to_raise(error) from error
            except Exception as error:
                raise CgError(f"{error}") from error

        return wrapper

    return error_handling

1	"""Module that holds the error handlers for the Post Processing service."""
2
3	import logging	1✔
4
5	from cg.exc import CgError	1✔
6
7	LOG = logging.getLogger(__name__)	1✔
8
9
10	def handle_post_processing_errors(to_except: tuple, to_raise):	1✔
11	"""Handle errors for the Post processing services."""
12
13	def error_handling(fn):	1✔
14	def wrapper(args, *kwargs):	1✔
15	try:	1✔
16	return fn(args, *kwargs)	1✔
17	except to_except as error:	1✔
18	raise to_raise(error) from error	1✔
NEW 19	except Exception as error:	×
NEW 20	raise CgError(f"{error}") from error	×
21
22	return wrapper	1✔
23
24	return error_handling	1✔

Clinical-Genomics / cg / 10387727026

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