griffithlab / pVACtools / 9390947251

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Merge pull request #1108 from ldhtnp/issues/1106

Added new valid_algorithms command (#1106)

61 of 85 new or added lines in 9 files covered. (71.76%)

1 existing line in 1 file now uncovered.

6088 of 7344 relevant lines covered (82.9%)

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90.0
/pvactools/tools/pvacvector/valid_algorithms.py
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import sys
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from pvactools.lib.valid_algorithms import ValidAlgorithms




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def define_parser():




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    return ValidAlgorithms.parser('pvacvector')




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def main(args_input = sys.argv[1:]):




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    parser = define_parser()




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    args = parser.parse_args(args_input)




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    ValidAlgorithms(args.allele, args.species).print_valid_algorithms()




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if __name__ == "__main__":




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    main()




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