8545209979

Committed 03 Apr 2024 08:37PM UTC coverage: 33.718% (+1.6%) from 32.1%

Build # 8545209979

Build Type

push

github

Committed by

web-flow

Commit Message

Merge pull request #113 from 4dn-dcic/ajs_add_del_script

New property or item status change script

Run Details

81 of 95 new or added lines in 3 files covered. (85.26%)

8 existing lines in 8 files now uncovered.

1256 of 3725 relevant lines covered (33.72%)

1.35 hits per line

Source File
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0.0

/scripts/patch_field_for_many_items.py

import sys
import argparse
from dcicutils.ff_utils import patch_metadata, delete_field
from functions import script_utils as scu


def get_args(args):
    parser = argparse.ArgumentParser(
        parents=[scu.create_input_arg_parser(), scu.create_ff_arg_parser()],
        formatter_class=argparse.RawDescriptionHelpFormatter,
    )
    parser.add_argument('field',
                        help="The field to update.")
    parser.add_argument('value',
                        help="The value(s) to update. Array fields need \"''\" surround \
                        even if only a single value i.e. \"'value here'\" or \"'v1' 'v2'\" \
                        NOTE: can delete field by passing val *delete*")
    parser.add_argument('--isarray',
                        default=False,
                        action='store_true',
                        help="Field is an array.  Default is False \
                        use this so value is correctly formatted even if only a single value")
    parser.add_argument('--numtype',
                        help="options: 'i' or 'f' If the field value is integer or number deal accordingly")
    args = parser.parse_args(args)
    return args


def main():
    args = get_args(sys.argv[1:])
    auth = scu.authenticate(key=args.key, keyfile=args.keyfile, env=args.env)
    print("Working on {}".format(auth.get('server')))
    itemids = scu.get_item_ids_from_args(args.input, auth, args.search)
    field = args.field
    val = args.value
    if val == 'True':
        val = True
    elif val == 'False':
        val = False
    if args.isarray:
        val = [v for v in val.split("'") if v]
    ntype = args.numtype
    if ntype:
        if ntype == 'i':
            val = int(val)
        elif ntype == 'f':
            val = float(val)
    for iid in itemids:
        print("PATCHING", iid, "to", field, "=", val)
        if (args.dbupdate):
            # do the patch
            if val == '*delete*':
                res = delete_field(iid, field, auth)
            else:
                res = patch_metadata({args.field: val}, iid, auth)
            if res['status'] == 'success':
                print("SUCCESS!")
            else:
                print("FAILED TO PATCH", iid, "RESPONSE STATUS", res['status'], res['description'])
                # print(res)


if __name__ == '__main__':  # pragma:nocover
    main()

1	import sys	×
2	import argparse	×
NEW 3	from dcicutils.ff_utils import patch_metadata, delete_field	×
4	from functions import script_utils as scu	×
5
6
7	def get_args(args):	×
8	parser = argparse.ArgumentParser(	×
9	parents=[scu.create_input_arg_parser(), scu.create_ff_arg_parser()],
10	formatter_class=argparse.RawDescriptionHelpFormatter,
11	)
12	parser.add_argument('field',	×
13	help="The field to update.")
14	parser.add_argument('value',	×
15	help="The value(s) to update. Array fields need \"''\" surround \
16	even if only a single value i.e. \"'value here'\" or \"'v1' 'v2'\" \
17	NOTE: can delete field by passing val delete")
UNCOV 18	parser.add_argument('--isarray',	×
19	default=False,
20	action='store_true',
21	help="Field is an array. Default is False \
22	use this so value is correctly formatted even if only a single value")
23	parser.add_argument('--numtype',	×
24	help="options: 'i' or 'f' If the field value is integer or number deal accordingly")
25	args = parser.parse_args(args)	×
26	return args	×
27
28
29	def main():	×
30	args = get_args(sys.argv[1:])	×
31	auth = scu.authenticate(key=args.key, keyfile=args.keyfile, env=args.env)	×
32	print("Working on {}".format(auth.get('server')))	×
33	itemids = scu.get_item_ids_from_args(args.input, auth, args.search)	×
34	field = args.field	×
35	val = args.value	×
36	if val == 'True':	×
37	val = True	×
38	elif val == 'False':	×
39	val = False	×
40	if args.isarray:	×
41	val = [v for v in val.split("'") if v]	×
42	ntype = args.numtype	×
43	if ntype:	×
44	if ntype == 'i':	×
45	val = int(val)	×
46	elif ntype == 'f':	×
47	val = float(val)	×
48	for iid in itemids:	×
49	print("PATCHING", iid, "to", field, "=", val)	×
50	if (args.dbupdate):	×
51	# do the patch
52	if val == 'delete':	×
53	res = delete_field(iid, field, auth)	×
54	else:
55	res = patch_metadata({args.field: val}, iid, auth)	×
56	if res['status'] == 'success':	×
57	print("SUCCESS!")	×
58	else:
59	print("FAILED TO PATCH", iid, "RESPONSE STATUS", res['status'], res['description'])	×
60	# print(res)
61
62
63	if __name__ == '__main__': # pragma:nocover
64	main()

4dn-dcic / dcicwrangling / 8545209979

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