8545209979

Committed 03 Apr 2024 08:37PM UTC coverage: 33.718% (+1.6%) from 32.1%

Build # 8545209979

Build Type

push

github

Committed by

web-flow

Commit Message

Merge pull request #113 from 4dn-dcic/ajs_add_del_script

New property or item status change script

Run Details

81 of 95 new or added lines in 3 files covered. (85.26%)

8 existing lines in 8 files now uncovered.

1256 of 3725 relevant lines covered (33.72%)

1.35 hits per line

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0.0

/scripts/delete_item_or_fields.py

1	#!/usr/bin/env python3
NEW 2	'''	×
3	Given a list of item IDs or search result will:
4	1. given one of more values in the '--fields' options delete those fields from the item
5	2. if no fields option then set the status of the item(s) to deleted
6	Useful for deleting multiple fields or changing item status to deleted
7	NOTE: can use patch_field_for_many_items script to delete a single field for many items
8	but this script is more direct/flexible in some ways
9	'''
NEW 10	import argparse	×
NEW 11	from dcicutils.ff_utils import get_metadata, delete_metadata, delete_field	×
NEW 12	from functions import script_utils as scu	×
13
14
NEW 15	def get_args(args):	×
NEW 16	parser = argparse.ArgumentParser(	×
17	parents=[scu.create_input_arg_parser(), scu.create_ff_arg_parser()],
18	formatter_class=argparse.RawDescriptionHelpFormatter,
19	)
NEW 20	parser.add_argument('--fields',	×
21	nargs='+',
22	help="With this option these fields will be removed from the items.")
NEW 23	args = parser.parse_args(args)	×
NEW 24	return args	×
25
26
27	def main(): # pragma: no cover
28	args = get_args()
29	auth = scu.authenticate(key=args.key, keyfile=args.keyfile, env=args.env)
30	dry_run = True
31	if args.dbupdate:
32	dry_run = False
33
34	print('#', auth.get('server'))
35	id_list = scu.get_item_ids_from_args(args.input, auth, args.search)
36	del_flds = None
37	if args.fields:
38	fields = args.fields
39	del_flds = ','.join(fields)
40	problems = []
41	for iid in id_list:
42	try:
43	get_metadata(iid, auth, add_on='frame=object')
44	except Exception:
45	problems.append(iid)
46	continue
47
48	if del_flds:
49	# we have field(s) that we want to delete from provided items
50	print(f"Will delete {del_flds} from {iid}")
51	if dry_run:
52	print("DRY RUN")
53	else:
54	try:
55	res = delete_field(iid, del_flds, auth)
56	status = res.get('status')
57	if status.lower() == 'success':
58	print(status)
59	else:
60	print(res)
61	problems.append(iid)
62	except Exception as e:
63	print(f"PROBLEM: {e}")
64	problems.append(iid)
65	else:
66	# we want to set the status of the items in id_list to deleted
67	print(f"Will set status of {iid} to DELETED")
68	if dry_run:
69	print("DRY RUN")
70	else:
71	try:
72	res = delete_metadata(iid, auth)
73	status = res.get('status')
74	if status.lower() == 'success':
75	print(status)
76	else:
77	print(res)
78	problems.append(iid)
79	except Exception as e:
80	print(f"PROBLEM: {e}")
81	problems.append(iid)
82
83	if problems:
84	print('THERE WAS A PROBLEM DELETING METADATA FOR THE FOLLOWING:')
85	for p in problems:
86	print(p)
87
88
NEW 89	if __name__ == '__main__':	×
NEW 90	main()	×

4dn-dcic / dcicwrangling / 8545209979

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