7286001939

Committed 21 Dec 2023 08:57AM UTC coverage: 76.104% (-0.8%) from 76.938%

Build # 7286001939

Build Type

Pull #485

github

Committed by

mgeplf

Commit Message

try scikit-build-core

Pull Request Pull Request #485: try scikit-build-core

Run Details

1930 of 2536 relevant lines covered (76.1%)

863.39 hits per line

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92.86

/src/shared_utils.hpp

/* Copyright (c) 2013-2023, EPFL/Blue Brain Project
 *
 * SPDX-License-Identifier: Apache-2.0
 */
#include <morphio/errorMessages.h>
#include <morphio/types.h>

#include "point_utils.h"


namespace morphio {

floatType _somaSurface(const SomaType type,
                       const range<const floatType>& diameters,
                       const range<const Point>& points);

template <typename T>
void _appendVector(std::vector<T>& to, const std::vector<T>& from, int offset) {
    to.insert(to.end(), from.begin() + offset, from.end());
}

template <typename T>
std::vector<typename T::Type> copySpan(const std::vector<typename T::Type>& data,
                                       SectionRange range) {
    if (data.empty()) {
        return {};
    }

    return {data.begin() + static_cast<long int>(range.first),
            data.begin() + static_cast<long int>(range.second)};
}

/**
 * Is `path` a directory?
 *
 * Symlinks to directories are considered directories.
 */
bool is_directory(const std::string& path);

/**
 * Is `path` a regular file?
 *
 * Symlinks to regular files are considered files.
 */
bool is_regular_file(const std::string& path);

/**
 * Join `dirname` and `filename` into one path.
 *
 * This follows the Python `os.path.join` semantics, i.e.,
 *   - join_path("", "foo") == "foo" (not "/foo")
 *   - join_path("/usr", "/home/foo") == "/home/foo" (not "/usr/home/foo")
 */
std::string join_path(const std::string& dirname, const std::string& filename);

namespace property {

template <typename T>
bool compare(const T& el1, const T& el2, const std::string& name, LogLevel logLevel) {
    if (el1 == el2) {
        return true;
    }

    if (logLevel > LogLevel::ERROR) {
        printError(Warning::UNDEFINED, name + " differs");
    }
    return false;
}
}  // namespace property

}  // namespace morphio

1	/* Copyright (c) 2013-2023, EPFL/Blue Brain Project
2	*
3	* SPDX-License-Identifier: Apache-2.0
4	*/
5	#include <morphio/errorMessages.h>
6	#include <morphio/types.h>
7
8	#include "point_utils.h"
9
10
11	namespace morphio {
12
13	floatType _somaSurface(const SomaType type,
14	const range<const floatType>& diameters,
15	const range<const Point>& points);
16
17	template <typename T>
18	void _appendVector(std::vector<T>& to, const std::vector<T>& from, int offset) {	1,332✔
19	to.insert(to.end(), from.begin() + offset, from.end());	1,332✔
20	}	1,332✔
21
22	template <typename T>
23	std::vector<typename T::Type> copySpan(const std::vector<typename T::Type>& data,	1,002✔
24	SectionRange range) {
25	if (data.empty()) {	1,002✔
26	return {};	246✔
27	}
28
29	return {data.begin() + static_cast<long int>(range.first),	1,512✔
30	data.begin() + static_cast<long int>(range.second)};	756✔
31	}
32
33	/**
34	* Is `path` a directory?
35	*
36	* Symlinks to directories are considered directories.
37	*/
38	bool is_directory(const std::string& path);
39
40	/**
41	* Is `path` a regular file?
42	*
43	* Symlinks to regular files are considered files.
44	*/
45	bool is_regular_file(const std::string& path);
46
47	/**
48	* Join `dirname` and `filename` into one path.
49	*
50	* This follows the Python `os.path.join` semantics, i.e.,
51	* - join_path("", "foo") == "foo" (not "/foo")
52	* - join_path("/usr", "/home/foo") == "/home/foo" (not "/usr/home/foo")
53	*/
54	std::string join_path(const std::string& dirname, const std::string& filename);
55
56	namespace property {
57
58	template <typename T>
59	bool compare(const T& el1, const T& el2, const std::string& name, LogLevel logLevel) {	4✔
60	if (el1 == el2) {	4✔
61	return true;	×
62	}
63
64	if (logLevel > LogLevel::ERROR) {	4✔
65	printError(Warning::UNDEFINED, name + " differs");	2✔
66	}
67	return false;	4✔
68	}
69	} // namespace property
70
71	} // namespace morphio

BlueBrain / MorphIO / 7286001939

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