6745516734

Committed 03 Nov 2023 01:01PM UTC coverage: 52.311% (+1.1%) from 51.227%

Build # 6745516734

Build Type

Pull #116

github

Committed by

web-flow

Commit Message

Merge e33ccbdef into 69afcab6b

Pull Request Pull Request #116: Improving documentation and encapsulating objects

Run Details

8498 of 20588 branches covered (0.0%)

Branch coverage included in aggregate %.

1299 of 2090 new or added lines in 55 files covered. (62.15%)

314 existing lines in 34 files now uncovered.

43302 of 78435 relevant lines covered (55.21%)

2965919.95 hits per line

Source File
Press 'n' to go to next uncovered line, 'b' for previous

0.0

/numcosmo/math/ncm_fit_mc.h

/***************************************************************************
 *            ncm_fit_mc.h
 *
 *  Sat December 01 17:19:03 2012
 *  Copyright  2012  Sandro Dias Pinto Vitenti
 *  <vitenti@uel.br>
 ****************************************************************************/
/*
 * numcosmo
 * Copyright (C) 2012 Sandro Dias Pinto Vitenti <vitenti@uel.br>
 *
 * numcosmo is free software: you can redistribute it and/or modify it
 * under the terms of the GNU General Public License as published by the
 * Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.
 *
 * numcosmo is distributed in the hope that it will be useful, but
 * WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
 * See the GNU General Public License for more details.
 *
 * You should have received a copy of the GNU General Public License along
 * with this program.  If not, see <http://www.gnu.org/licenses/>.
 */

#ifndef _NCM_FIT_MC_H_
#define _NCM_FIT_MC_H_

#include <glib.h>
#include <glib-object.h>
#include <numcosmo/build_cfg.h>
#include <numcosmo/math/ncm_fit.h>
#include <numcosmo/math/ncm_mset_catalog.h>
#include <numcosmo/math/ncm_timer.h>
#include <numcosmo/math/ncm_memory_pool.h>

#ifndef NUMCOSMO_GIR_SCAN
#include <gsl/gsl_histogram.h>
#ifdef NUMCOSMO_HAVE_CFITSIO
#include <fitsio.h>
#endif /* NUMCOSMO_HAVE_CFITSIO */
#endif /* NUMCOSMO_GIR_SCAN */

G_BEGIN_DECLS

#define NCM_TYPE_FIT_MC (ncm_fit_mc_get_type ())

G_DECLARE_FINAL_TYPE (NcmFitMC, ncm_fit_mc, NCM, FIT_MC, GObject)

/**
 * NcmFitMCResampleType:
 * @NCM_FIT_MC_RESAMPLE_FROM_MODEL: Montecarlo resampling from models
 * @NCM_FIT_MC_RESAMPLE_BOOTSTRAP_NOMIX: Montecarlo bootstraping each #NcmData separately.
 * @NCM_FIT_MC_RESAMPLE_BOOTSTRAP_MIX: Montecarlo bootstraping mixing all #NcmData in the bootstrap process.
 *
 * Montecarlo resample options
 *
 */
typedef enum _NcmFitMCResampleType
{
  NCM_FIT_MC_RESAMPLE_FROM_MODEL = 0,
  NCM_FIT_MC_RESAMPLE_BOOTSTRAP_NOMIX,
  NCM_FIT_MC_RESAMPLE_BOOTSTRAP_MIX,
  /* < private > */
  NCM_FIT_MC_RESAMPLE_BOOTSTRAP_LEN, /*< skip >*/
} NcmFitMCResampleType;

typedef void (*NcmFitMCResample) (NcmDataset *dset, NcmMSet *mset, NcmRNG *rng);

NcmFitMC *ncm_fit_mc_new (NcmFit *fit, NcmFitMCResampleType rtype, NcmFitRunMsgs mtype);
void ncm_fit_mc_free (NcmFitMC *mc);
void ncm_fit_mc_clear (NcmFitMC **mc);

void ncm_fit_mc_set_data_file (NcmFitMC *mc, const gchar *filename);

void ncm_fit_mc_set_mtype (NcmFitMC *mc, NcmFitRunMsgs mtype);
void ncm_fit_mc_set_rtype (NcmFitMC *mc, NcmFitMCResampleType rtype);
void ncm_fit_mc_set_nthreads (NcmFitMC *mc, guint nthreads);
void ncm_fit_mc_keep_order (NcmFitMC *mc, gboolean keep_order);
void ncm_fit_mc_set_fiducial (NcmFitMC *mc, NcmMSet *fiduc);
void ncm_fit_mc_set_rng (NcmFitMC *mc, NcmRNG *rng);

gboolean ncm_fit_mc_is_running (NcmFitMC *mc);

void ncm_fit_mc_start_run (NcmFitMC *mc);
void ncm_fit_mc_end_run (NcmFitMC *mc);
void ncm_fit_mc_reset (NcmFitMC *mc);
void ncm_fit_mc_set_first_sample_id (NcmFitMC *mc, gint first_sample_id);
void ncm_fit_mc_run (NcmFitMC *mc, guint n);
void ncm_fit_mc_run_lre (NcmFitMC *mc, guint prerun, gdouble lre);
void ncm_fit_mc_mean_covar (NcmFitMC *mc);

NcmMSetCatalog *ncm_fit_mc_get_catalog (NcmFitMC *mc);
NcmMSetCatalog *ncm_fit_mc_peek_catalog (NcmFitMC *mc);

#define NCM_FIT_MC_MIN_SYNC_INTERVAL (10.0)

G_END_DECLS

#endif /* _NCM_FIT_MC_H_ */


1	/***************************************************************************
2	* ncm_fit_mc.h
3	*
4	* Sat December 01 17:19:03 2012
5	* Copyright 2012 Sandro Dias Pinto Vitenti
6	* <vitenti@uel.br>
7	****************************************************************************/
8	/*
9	* numcosmo
10	* Copyright (C) 2012 Sandro Dias Pinto Vitenti <vitenti@uel.br>
11	*
12	* numcosmo is free software: you can redistribute it and/or modify it
13	* under the terms of the GNU General Public License as published by the
14	* Free Software Foundation, either version 3 of the License, or
15	* (at your option) any later version.
16	*
17	* numcosmo is distributed in the hope that it will be useful, but
18	* WITHOUT ANY WARRANTY; without even the implied warranty of
19	* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
20	* See the GNU General Public License for more details.
21	*
22	* You should have received a copy of the GNU General Public License along
23	* with this program. If not, see <http://www.gnu.org/licenses/>.
24	*/
25
26	#ifndef _NCM_FIT_MC_H_
27	#define _NCM_FIT_MC_H_
28
29	#include <glib.h>
30	#include <glib-object.h>
31	#include <numcosmo/build_cfg.h>
32	#include <numcosmo/math/ncm_fit.h>
33	#include <numcosmo/math/ncm_mset_catalog.h>
34	#include <numcosmo/math/ncm_timer.h>
35	#include <numcosmo/math/ncm_memory_pool.h>
36
37	#ifndef NUMCOSMO_GIR_SCAN
38	#include <gsl/gsl_histogram.h>
39	#ifdef NUMCOSMO_HAVE_CFITSIO
40	#include <fitsio.h>
41	#endif /* NUMCOSMO_HAVE_CFITSIO */
42	#endif /* NUMCOSMO_GIR_SCAN */
43
44	G_BEGIN_DECLS
45
46	#define NCM_TYPE_FIT_MC (ncm_fit_mc_get_type ())
47
NEW 48	G_DECLARE_FINAL_TYPE (NcmFitMC, ncm_fit_mc, NCM, FIT_MC, GObject)	×
49
50	/**
51	* NcmFitMCResampleType:
52	* @NCM_FIT_MC_RESAMPLE_FROM_MODEL: Montecarlo resampling from models
53	* @NCM_FIT_MC_RESAMPLE_BOOTSTRAP_NOMIX: Montecarlo bootstraping each #NcmData separately.
54	* @NCM_FIT_MC_RESAMPLE_BOOTSTRAP_MIX: Montecarlo bootstraping mixing all #NcmData in the bootstrap process.
55	*
56	* Montecarlo resample options
57	*
58	*/
59	typedef enum _NcmFitMCResampleType
60	{
61	NCM_FIT_MC_RESAMPLE_FROM_MODEL = 0,
62	NCM_FIT_MC_RESAMPLE_BOOTSTRAP_NOMIX,
63	NCM_FIT_MC_RESAMPLE_BOOTSTRAP_MIX,
64	/* < private > */
65	NCM_FIT_MC_RESAMPLE_BOOTSTRAP_LEN, /< skip >/
66	} NcmFitMCResampleType;
67
68	typedef void (NcmFitMCResample) (NcmDataset dset, NcmMSet mset, NcmRNG rng);
69
70	NcmFitMC ncm_fit_mc_new (NcmFit fit, NcmFitMCResampleType rtype, NcmFitRunMsgs mtype);
71	void ncm_fit_mc_free (NcmFitMC *mc);
72	void ncm_fit_mc_clear (NcmFitMC **mc);
73
74	void ncm_fit_mc_set_data_file (NcmFitMC mc, const gchar filename);
75
76	void ncm_fit_mc_set_mtype (NcmFitMC *mc, NcmFitRunMsgs mtype);
77	void ncm_fit_mc_set_rtype (NcmFitMC *mc, NcmFitMCResampleType rtype);
78	void ncm_fit_mc_set_nthreads (NcmFitMC *mc, guint nthreads);
79	void ncm_fit_mc_keep_order (NcmFitMC *mc, gboolean keep_order);
80	void ncm_fit_mc_set_fiducial (NcmFitMC mc, NcmMSet fiduc);
81	void ncm_fit_mc_set_rng (NcmFitMC mc, NcmRNG rng);
82
83	gboolean ncm_fit_mc_is_running (NcmFitMC *mc);
84
85	void ncm_fit_mc_start_run (NcmFitMC *mc);
86	void ncm_fit_mc_end_run (NcmFitMC *mc);
87	void ncm_fit_mc_reset (NcmFitMC *mc);
88	void ncm_fit_mc_set_first_sample_id (NcmFitMC *mc, gint first_sample_id);
89	void ncm_fit_mc_run (NcmFitMC *mc, guint n);
90	void ncm_fit_mc_run_lre (NcmFitMC *mc, guint prerun, gdouble lre);
91	void ncm_fit_mc_mean_covar (NcmFitMC *mc);
92
93	NcmMSetCatalog ncm_fit_mc_get_catalog (NcmFitMC mc);
94	NcmMSetCatalog ncm_fit_mc_peek_catalog (NcmFitMC mc);
95
96	#define NCM_FIT_MC_MIN_SYNC_INTERVAL (10.0)
97
98	G_END_DECLS
99
100	#endif /* _NCM_FIT_MC_H_ */
101

NumCosmo / NumCosmo / 6745516734

Source File Press 'n' to go to next uncovered line, 'b' for previous

Source File
Press 'n' to go to next uncovered line, 'b' for previous