4132887853

Build Type

push

github-actions

Committed by GitHub

Commit Message

Add 'anonymous_query' mode (#384)

Run Details

357 of 357 new or added lines in 16 files covered. (100.0%)

6166 of 7374 relevant lines covered (83.62%)

0.84 hits per line

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82.61

/askomics/libaskomics/Start.py

"""Contain the Start classe
"""
import os

from askomics.libaskomics.Database import Database
from askomics.libaskomics.Params import Params


class Start(Params):

    """Initialize the data directory and the database

    Attributes
    ----------
    data_directory : str
        Path to the data directory
    database_path : str
        Path to the database file
    """

    def __init__(self, app, session):
        """Get data directory and database paths from the askomics settings

        Parameters
        ----------
        app :
            flask app
        session :
            flask session
        """
        Params.__init__(self, app, session)

        self.data_directory = self.settings.get('askomics', 'data_directory')
        self.database_path = self.settings.get('askomics', 'database_path')

    def start(self):
        """Create the data diretory and initialize the database file
        """
        self.create_data_directory()
        self.create_database()
        self.create_anonymous()

    def create_data_directory(self):
        """Create the data directory if it not exists
        """
        if not os.path.isdir(self.data_directory):
            os.makedirs(self.data_directory)

    def create_database(self):
        """Initialize the database file
        """
        database = Database(self.app, self.session)
        database.init_database()

    def create_anonymous(self):
        """Create anonymous data folder if required
        """
        if self.settings.get('askomics', 'anonymous_query', fallback=False):
            data_path = "{}/{}_{}/results".format(
                self.data_directory,
                "0",
                "anonymous"
            )
            if not os.path.isdir(data_path):
                os.makedirs(data_path)

1	"""Contain the Start classe
2	"""
3	import os	1✔
4
5	from askomics.libaskomics.Database import Database	1✔
6	from askomics.libaskomics.Params import Params	1✔
7
8
9	class Start(Params):	1✔
10
11	"""Initialize the data directory and the database
12
13	Attributes
14	----------
15	data_directory : str
16	Path to the data directory
17	database_path : str
18	Path to the database file
19	"""
20
21	def __init__(self, app, session):	1✔
22	"""Get data directory and database paths from the askomics settings
23
24	Parameters
25	----------
26	app :
27	flask app
28	session :
29	flask session
30	"""
31	Params.__init__(self, app, session)	1✔
32
33	self.data_directory = self.settings.get('askomics', 'data_directory')	1✔
34	self.database_path = self.settings.get('askomics', 'database_path')	1✔
35
36	def start(self):	1✔
37	"""Create the data diretory and initialize the database file
38	"""
39	self.create_data_directory()	1✔
40	self.create_database()	1✔
41	self.create_anonymous()	1✔
42
43	def create_data_directory(self):	1✔
44	"""Create the data directory if it not exists
45	"""
46	if not os.path.isdir(self.data_directory):	1✔
47	os.makedirs(self.data_directory)	×
48
49	def create_database(self):	1✔
50	"""Initialize the database file
51	"""
52	database = Database(self.app, self.session)	1✔
53	database.init_database()	1✔
54
55	def create_anonymous(self):	1✔
56	"""Create anonymous data folder if required
57	"""
58	if self.settings.get('askomics', 'anonymous_query', fallback=False):	1✔
59	data_path = "{}/{}_{}/results".format(	×
60	self.data_directory,
61	"0",
62	"anonymous"
63	)
64	if not os.path.isdir(data_path):	×
65	os.makedirs(data_path)	×

askomics / flaskomics / 4132887853

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