596750441

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Pull Request Pull Request #383: Set secrets for scada

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84.09

/straxen/misc.py

import numpy as np
import pandas as pd
import socket
import strax
import straxen
import sys
export, __all__ = strax.exporter()
from configparser import NoSectionError


@export
def dataframe_to_wiki(df, float_digits=5, title='Awesome table', 
                      force_int=tuple()):
    """Convert a pandas dataframe to a dokuwiki table 
    (which you can copy-paste onto the XENON wiki)
    :param df: dataframe to convert
    :param float_digits: Round float-ing point values to this number of digits.
    :param title: title of the table.
    """
    table = '^ %s ' % title + '^' * (len(df.columns) - 1) + '^\n'
    table += '^ ' + ' ^ '.join(df.columns) + ' ^\n'

    def do_round(x):
        if isinstance(x, float):
            return round(x, float_digits)
        return x
    force_int = np.where(np.in1d(df.columns.values,
                                 strax.to_str_tuple(force_int)))[0]

    for _, row in df.iterrows():
        table += "| " + ' | '.join([
            str(int(x) if i in force_int else do_round(x))
            for i, x in enumerate(row.values.tolist())]) + ' |\n'
    return table

def _force_int(df, columns):
    for c in strax.to_str_tuple(columns):
        df[c] = df[c].values.astype(np.int64)
    return df


@export
def print_versions(modules=('strax', 'straxen'), return_string=False):
    """
    Print versions of modules installed.

    :param modules: Modules to print, should be str, tuple or list. E.g.
        print_versions(modules=('strax', 'straxen', 'wfsim',
        'cutax', 'pema'))
    :param return_string: optional. Instead of printing the message,
        return a string
    :return: optional, the message that would have been printed
    """
    message = (f'Working on {socket.getfqdn()} with the following '
               f'versions and installation paths:')
    py_version = sys.version.replace(' (', '\t(').replace('\n', '')
    message += f"\npython\tv{py_version}"
    for m in strax.to_str_tuple(modules):
        try:
            # pylint: disable=exec-used
            exec(f'import {m}')
            # pylint: disable=eval-used
            message += f'\n{m}\tv{eval(m).__version__}\t{eval(m).__path__[0]}'
        except (ModuleNotFoundError, ImportError):
            print(f'{m} is not installed')
    if return_string:
        return message
    print(message)


@export
def utilix_is_configured(header='RunDB', section='pymongo_database') -> bool:
    """
    Check if we have the right connection to
    :return: bool, can we connect to the Mongo database?
    """
    try:
        return (hasattr(straxen.uconfig, 'get') and
                straxen.uconfig.get(header, section) is not None)
    except NoSectionError:
        return False

1	import numpy as np	1✔
2	import pandas as pd	1✔
3	import socket	1✔
4	import strax	1✔
5	import straxen	1✔
6	import sys	1✔
7	export, __all__ = strax.exporter()	1✔
8	from configparser import NoSectionError	1✔
9
10
11	@export	1✔
12	def dataframe_to_wiki(df, float_digits=5, title='Awesome table',	1✔
13	force_int=tuple()):
14	"""Convert a pandas dataframe to a dokuwiki table
15	(which you can copy-paste onto the XENON wiki)
16	:param df: dataframe to convert
17	:param float_digits: Round float-ing point values to this number of digits.
18	:param title: title of the table.
19	"""
20	table = '^ %s ' % title + '^' * (len(df.columns) - 1) + '^\n'	1✔
21	table += '^ ' + ' ^ '.join(df.columns) + ' ^\n'	1✔
22
23	def do_round(x):	1✔
24	if isinstance(x, float):	1✔
25	return round(x, float_digits)	1✔
26	return x	×
27	force_int = np.where(np.in1d(df.columns.values,	1✔
28	strax.to_str_tuple(force_int)))[0]
29
30	for _, row in df.iterrows():	1✔
31	table += "\| " + ' \| '.join([	1✔
32	str(int(x) if i in force_int else do_round(x))
33	for i, x in enumerate(row.values.tolist())]) + ' \|\n'
34	return table	1✔
35
36	def _force_int(df, columns):	1✔
37	for c in strax.to_str_tuple(columns):	×
38	df[c] = df[c].values.astype(np.int64)	×
39	return df	×
40
41
42	@export	1✔
43	def print_versions(modules=('strax', 'straxen'), return_string=False):	1✔
44	"""
45	Print versions of modules installed.
46
47	:param modules: Modules to print, should be str, tuple or list. E.g.
48	print_versions(modules=('strax', 'straxen', 'wfsim',
49	'cutax', 'pema'))
50	:param return_string: optional. Instead of printing the message,
51	return a string
52	:return: optional, the message that would have been printed
53	"""
54	message = (f'Working on {socket.getfqdn()} with the following '	1✔
55	f'versions and installation paths:')
56	py_version = sys.version.replace(' (', '\t(').replace('\n', '')	1✔
57	message += f"\npython\tv{py_version}"	1✔
58	for m in strax.to_str_tuple(modules):	1✔
59	try:	1✔
60	# pylint: disable=exec-used
61	exec(f'import {m}')	1✔
62	# pylint: disable=eval-used
63	message += f'\n{m}\tv{eval(m).__version__}\t{eval(m).__path__[0]}'	1✔
64	except (ModuleNotFoundError, ImportError):	1✔
65	print(f'{m} is not installed')	1✔
66	if return_string:	1✔
67	return message	×
68	print(message)	1✔
69
70
71	@export	1✔
72	def utilix_is_configured(header='RunDB', section='pymongo_database') -> bool:	1✔
73	"""
74	Check if we have the right connection to
75	:return: bool, can we connect to the Mongo database?
76	"""
77	try:	1✔
78	return (hasattr(straxen.uconfig, 'get') and	1✔
79	straxen.uconfig.get(header, section) is not None)
80	except NoSectionError:	×
81	return False	×

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