scivision / georinex / 221

pending completion

Build # 221

Build Type

push

travis-ci

Committed by

scivision

Commit Message

<a href="https://github.com/scivision/georinex/commit/<a class=hub.com/scivision/georinex/commit/<a class="double-link" href="https://git"><a class=hub.com/scivision/georinex/commit/<a class="double-link" href="https://git"><a class=hub.com/scivision/georinex/commit/5eb7b4db7ddb0f61870e99e17dc783e45cfa8884">5eb7b4db7<a href="https://github.com/scivision/georinex/commit/5eb7b4db7ddb0f61870e99e17dc783e45cfa8884">&lt;a href=&quot;https://github.com/scivision/georinex/commit/5eb7b4db7ddb0f61870e99e17dc783e45cfa8884">&lt;a href=&quot;https://github.com/scivision/georinex/commit/5eb7b4db7ddb0f61870e99e17dc783e45cfa8884&quot;&gt;&amp;quot;&amp;gt;Squashed commit of the following:

commit &amp;lt;/a&amp;gt;&amp;lt;a class=&amp;quot;double-link&amp;quot; href=&amp;quot;https://github.com/scivision/georinex/commit/&amp;lt;a class=&amp;quot;double-link&amp;quot; href=&amp;quot;https://github.com/scivision/georinex/commit/88f86847484a8da45e977ec4a50a0facc24ca1c4&quot;&gt;88f868474&lt;/a&gt;&quot;&gt;88f868474&lt;/a&gt;&lt;a href=&quot;https://github.com/scivision/georinex/commit/5eb7b4db7ddb0f61870e99e17dc783e45cfa8884&quot;&gt;
Author: Michael Hirsch, Ph.D &amp;lt;scivision@users.noreply.github.com&amp;gt;
Date:   Fri Aug 24 13:57:49 2018 -0400

    increase test coverage

commit &lt;/a&gt;&lt;a class=&quot;double-link&quot; href=&quot;https://github.com/scivision/georinex/commit/&lt;a class=&quot;double-link&quot; href=&quot;https://github.com/scivision/georinex/commit/93c5d1698990c726df85f464e048f89144fd47ca">93c5d1698</a>">93c5d1698</a><a href="https://github.com/scivision/georinex/commit/5eb7b4db7ddb0f61870e99e17dc783e45cfa8884">
Author: Michael Hirsch, Ph.D &lt;scivision@users.noreply.github.com&gt;
Date:   Fri Aug 24 13:25:30 2018 -0400

    handle indicators

commit </a><a class="double-link" href="https://github.com/scivision/georinex/commit/<a class="double-link" href="https://github.com/scivision/georinex/commit/a72f6fd3678dbcc3241523fb11e65d1b83bd9862">a72f6fd36">a72f6fd36
Author: Michael Hirsch, Ph.D <scivision@users.noreply.github.com>
Date:   Fri Aug 24 13:14:05 2018 -0400

    INWORK: all but indicators OK

Run Details

49 of 49 new or added lines in 3 files covered. (100.0%)

1244 of 1397 relevant lines covered (89.05%)

0.89 hits per line

Source File
Press 'n' to go to next uncovered line, 'b' for previous

63.89

/ReadRinex.py

#!/usr/bin/env python
"""
Reads RINEX 2/3 OBS/NAV files and plots.
Returns data as xarray.Dataset, think of it like an N-dimensional Numpy NDarray with lots of metadata and
very fancy indexing methods.
Xarray can be thought of as an analytically-tuned Pandas.

The RINEX version is automatically detected.
Compressed RINEX files including:
    * GZIP .gz
    * ZIP .zip
    * LZW .Z
are handled seamlessly via TextIO stream.

Examples:

./ReadRinex.py ~/data/VEN100ITA_R_20181580000_01D_MN.rnx.gz
./ReadRinex.py ~/data/ABMF00GLP_R_20181330000_01D_30S_MO.zip

./ReadRinex.py ~/data/PUMO00CR__R_20180010000_01D_15S_MO.rnx -t 2018-01-01 2018-01-01T00:30

"""
from pathlib import Path
from argparse import ArgumentParser
import georinex as gr
import georinex.plots as grp
try:
    from matplotlib.pyplot import show
except ImportError:
    show = None


def main():
    p = ArgumentParser(description='example of reading RINEX 2/3 Navigation/Observation file')
    p.add_argument('rinexfn', help='path to RINEX 2 or RINEX 3 file')
    p.add_argument('-g', '--glob', help='file glob pattern', default='*')
    p.add_argument('-o', '--outfn', help='write data as NetCDF4 file')
    p.add_argument('-v', '--verbose', action='store_true')
    p.add_argument('-u', '--use', help='select which GNSS system(s) to use', nargs='+')
    p.add_argument('-m', '--meas', help='select which GNSS measurement(s) to use', nargs='+')
    p.add_argument('-t', '--tlim', help='specify time limits (process part of file)', nargs=2)
    p.add_argument('-useindicators', help='use SSI, LLI indicators (signal, loss of lock)',
                   action='store_true')
    P = p.parse_args()

    verbose = P.verbose

    fn = Path(P.rinexfn).expanduser()

    if fn.is_file():
        data = gr.load(P.rinexfn, P.outfn, use=P.use, tlim=P.tlim,
                       useindicators=P.useindicators, meas=P.meas, verbose=verbose)
    elif fn.is_dir():
        flist = [f for f in fn.glob(P.glob) if f.is_file()]
        for f in flist:
            try:
                data = gr.load(f, P.outfn, use=P.use, tlim=P.tlim,
                               useindicators=P.useindicators, meas=P.meas, verbose=verbose)
            except Exception as e:
                print(f'{f.name}: {e}')
                continue

            if verbose:
                grp.timeseries(data)
    else:
        raise FileNotFoundError(f'{fn} is not a path or file')
# %% plots
    if verbose and show is not None:
        grp.timeseries(data)
        show()


if __name__ == '__main__':
    main()

1	#!/usr/bin/env python
2	"""	1✔
3	Reads RINEX 2/3 OBS/NAV files and plots.
4	Returns data as xarray.Dataset, think of it like an N-dimensional Numpy NDarray with lots of metadata and
5	very fancy indexing methods.
6	Xarray can be thought of as an analytically-tuned Pandas.
7
8	The RINEX version is automatically detected.
9	Compressed RINEX files including:
10	* GZIP .gz
11	* ZIP .zip
12	* LZW .Z
13	are handled seamlessly via TextIO stream.
14
15	Examples:
16
17	./ReadRinex.py ~/data/VEN100ITA_R_20181580000_01D_MN.rnx.gz
18	./ReadRinex.py ~/data/ABMF00GLP_R_20181330000_01D_30S_MO.zip
19
20	./ReadRinex.py ~/data/PUMO00CR__R_20180010000_01D_15S_MO.rnx -t 2018-01-01 2018-01-01T00:30
21
22	"""
23	from pathlib import Path	1✔
24	from argparse import ArgumentParser	1✔
25	import georinex as gr	1✔
26	import georinex.plots as grp	1✔
27	try:	1✔
28	from matplotlib.pyplot import show	1✔
29	except ImportError:
30	show = None
31
32
33	def main():	1✔
34	p = ArgumentParser(description='example of reading RINEX 2/3 Navigation/Observation file')	1✔
35	p.add_argument('rinexfn', help='path to RINEX 2 or RINEX 3 file')	1✔
36	p.add_argument('-g', '--glob', help='file glob pattern', default='*')	1✔
37	p.add_argument('-o', '--outfn', help='write data as NetCDF4 file')	1✔
38	p.add_argument('-v', '--verbose', action='store_true')	1✔
39	p.add_argument('-u', '--use', help='select which GNSS system(s) to use', nargs='+')	1✔
40	p.add_argument('-m', '--meas', help='select which GNSS measurement(s) to use', nargs='+')	1✔
41	p.add_argument('-t', '--tlim', help='specify time limits (process part of file)', nargs=2)	1✔
42	p.add_argument('-useindicators', help='use SSI, LLI indicators (signal, loss of lock)',	1✔
43	action='store_true')
44	P = p.parse_args()	1✔
45
46	verbose = P.verbose	1✔
47
48	fn = Path(P.rinexfn).expanduser()	1✔
49
50	if fn.is_file():	1✔
51	data = gr.load(P.rinexfn, P.outfn, use=P.use, tlim=P.tlim,	1✔
52	useindicators=P.useindicators, meas=P.meas, verbose=verbose)
53	elif fn.is_dir():	×
54	flist = [f for f in fn.glob(P.glob) if f.is_file()]	×
55	for f in flist:	×
56	try:	×
57	data = gr.load(f, P.outfn, use=P.use, tlim=P.tlim,	×
58	useindicators=P.useindicators, meas=P.meas, verbose=verbose)
59	except Exception as e:	×
60	print(f'{f.name}: {e}')	×
61	continue	×
62
63	if verbose:	×
64	grp.timeseries(data)	×
65	else:
66	raise FileNotFoundError(f'{fn} is not a path or file')	×
67	# %% plots
68	if verbose and show is not None:	1✔
69	grp.timeseries(data)	×
70	show()	×
71
72
73	if __name__ == '__main__':
74	main()

scivision / georinex / 221

Source File Press 'n' to go to next uncovered line, 'b' for previous

Source File
Press 'n' to go to next uncovered line, 'b' for previous