googlegenomics / dataflow-java / 16

pending completion

Build # 16

Build Type

Pull #26

travis-ci

Committed by

deflaux

Commit Message

Added emit-to-BigQuery pipeline.

Added a sample pipeline that converts data in Genome VCF (gVCF) format to variant-only VCF data with calls from block-records merged into the variants with which they overlap. The resultant data is emitted to a BigQuery table.

Pull Request Pull Request #26: Added sample pipeline to emit gVCF to VCF data to BigQuery.

Run Details

168 of 523 relevant lines covered (32.12%)

9.0 hits per line

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38.46

/com/google/cloud/genomics/dataflow/functions/JoinGvcfVariants.java

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The file "com/google/cloud/genomics/dataflow/functions/JoinGvcfVariants.java" isn't available on github. Either it's been removed, or the repo root directory needs to be updated.

googlegenomics / dataflow-java / 16

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