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• feature/fix_gatk_combine_cli
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• feature/preseq
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• feature/salmon
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• 1887/merge
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• 1890/merge
• feature/rna_qc_mestrics
• 1891/merge
• feature/clinvar_ref
• 1892/merge
• release/10.0.0
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• feature/fix_deepvariant_version_typo
• 1894/merge
• feature/no_atomize
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• feature/bcftools_norm_recipe
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• feature/info_download
• 1899/merge
• feature/rna_mt_contig
• feature/norm_rna_and_mt
• 1900/merge
• feature/recipe_bind_path_mod
• 1901/merge
• feature/norm_glnexus
• 1902/merge
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• feature/rollback_telomercat
• feature/vcfparser_recipe_fix
• 1907/merge
• feature/cadd_index
• 1908/merge
• feature/htslib_rollback
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• feature/bcftools_base
• v10.0.0
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• release/10.0.1
• feat/stranger_update
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• v10.0.1
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• feature/gnomad_3.1.1_download
• release/10.0.2
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• feature/hmtnote
• feature/gnomad_mt
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• v10.0.2
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• release/10.0.3
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• v10.0.3
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• feature/set_resources
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• feature/update_download_paths
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• feature/qc_collect_deliverable
• feature/start_after_recipe
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• feature/start_after_recipe_flag
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• feature/gnu_awk
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• v10.1.0
• v10.2.0
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• feature/mitodel
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• feature/found_in_tag
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• feature/deactivate_gatk
• update_software
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• feature/limit_qc
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• feature/ghcr_uri
• feature/update_glnexus_uri
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• feat/fix_glnexus_permission
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• hmtnote/quickfix
• hotfix/mt_filter
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• feature/local_images
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• v10.2.1
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• feature/sv_freq_filter
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• feature/hmtnote_version_regex
• feature/fixing_loqus_headers
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• feature/trim_mt_anno_whitespace
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• feature/change_to_bcftools_concat
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• hotfix/add_missing_qc_value
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• v10.2.2
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• feature/more_qc_metrics
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• feature/increased_AF_cutoff
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• feature/paper_and_redirection
• feature/fixing_test_coverage
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• release/11.0.0
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• feature/gens
• gens
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• feature/gens_install
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• release/10.2.3
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• release/10.2.4
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• upd_on_unaffected_children
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• expansionhunter_5
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• svdb_update
• feature/gens_preproc_container_fix
• 1992/merge
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• feature/gens_preproc_version_1.0.2
• updating_programs
• 1996/merge
• update_databases
• 1998/merge
• fixes_before_mip11.1
• 1999/merge
• mip11.0.2
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• release/mip11.1
• release/11.0.3
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• release/11.1.1
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• 2007/merge
• tiddit_update
• 2008/merge
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• salmon_memory
• 2010/merge
• 2011/merge
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• 2012/merge
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• remove_rseqc_read_duplication
• release/11.2.0
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• release/12.0.0
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• v12.0.0
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• update_codeowners
• vcf_rerun
• annotate-clinvar-dataset
• improper_pair_eval

fix(gatk_combine): Also remove gln_nexus from panel options